| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas stutzeri RCH2 | Psest_0158 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | sig. | 100 | 100 |
| o | Pseudomonas sp. S08-1 | OH686_14635 | | ABC-type amino acid transport/signal transduction system, periplasmic component/domain | insig. | 67 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS11515 | | ABC transporter substrate-binding protein | sig. | 67 | 100 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_27820 | | amino acid ABC transporter substrate-binding protein | insig. | 67 | 100 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS50585 | | ABC transporter substrate-binding protein | insig. | 67 | 100 |
| o | Pseudomonas segetis P6 | ACVTMO_RS21310 | | substrate-binding periplasmic protein | insig. | 65 | 94 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4891 | | amino acid ABC transporter substrate-binding protein, PAAT family | insig. | 59 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4891 | | amino acid ABC transporter substrate-binding protein, PAAT family | insig. | 59 | 100 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11520 | | ABC transporter substrate-binding protein | strong | 61 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27815 | | amino acid ABC transporter substrate-binding protein | insig. | 61 | 95 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50580 | | ABC transporter substrate-binding protein | strong | 61 | 95 |
| | Pseudomonas protegens RBAN4 | FABNJH_01910 | | PBPb domain-containing protein | insig. | 57 | 100 |
| | Pseudomonas segetis P6 | ACVTMO_RS21315 | | substrate-binding periplasmic protein | insig. | 57 | 95 |
| | Pseudomonas sp. S08-1 | OH686_14640 | | ABC-type amino acid transport/signal transduction system, periplasmic component/domain | insig. | 55 | 100 |
| | Pseudomonas simiae WCS417 | PS417_01585 | | amino acid ABC transporter substrate-binding protein | sig. | 57 | 100 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00537 | | hypothetical protein | insig. | 57 | 98 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3837 | | ABC-type amino acid transport, signal transduction systems, periplasmic component/domain | insig. | 55 | 100 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_09790 | | amino acid ABC transporter substrate-binding protein | insig. | 56 | 100 |
| | Pseudomonas orientalis W4I3 | QF045_RS04655 | | ABC transporter substrate-binding protein | insig. | 56 | 96 |
| | Pseudomonas sp. DMC3 | GFF4094 | | hypothetical protein | cofit | 55 | 100 |
| | Pseudomonas sp. RS175 | PFR28_04934 | | hypothetical protein | insig. | 56 | 100 |
| | Pseudomonas stutzeri RCH2 | Psest_0157 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | sig. | 57 | 94 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1622 | | ABC-type amino acid transport, signal transduction systems, periplasmic component/domain | insig. | 58 | 90 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS01630 | | ABC transporter substrate-binding protein | insig. | 56 | 94 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS01630 | | ABC transporter substrate-binding protein | insig. | 56 | 94 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_357 | | ABC-type amino acid transport, signal transduction systems, periplasmic component/domain | insig. | 55 | 95 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_12095 | | amino acid ABC transporter substrate-binding protein | sig. | 56 | 90 |
| | Pseudomonas sp. SVBP6 | COO64_RS13275 | | ABC transporter substrate-binding protein | insig. | 56 | 90 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11525 | | ABC transporter substrate-binding protein | strong | 56 | 89 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50575 | | ABC transporter substrate-binding protein | strong | 56 | 89 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27810 | | amino acid ABC transporter substrate-binding protein | insig. | 55 | 89 |
| | Pseudomonas stutzeri RCH2 | Psest_4079 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | sig. | 47 | 94 |
| | Pseudomonas sp. S08-1 | OH686_14630 | | ABC-type amino acid transport, signal transduction systems, periplasmic component/domain | cofit | 45 | 100 |
| o | Marinobacter adhaerens HP15 | HP15_2667 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein | insig. | 42 | 90 |
| | Shewanella amazonensis SB2B | Sama_0424 | | hypothetical protein (RefSeq) | insig. | 35 | 89 |
| | Shewanella loihica PV-4 | Shew_0629 | | extracellular solute-binding protein (RefSeq) | insig. | 32 | 94 |
| | Pseudomonas sp. RS175 | PFR28_02341 | | hypothetical protein | insig. | 28 | 95 |
| | Agrobacterium fabrum C58 | Atu2229 | | ABC transporter, substrate binding protein (amino acid) | insig. | 30 | 90 |
| | Pseudomonas sp. S08-1 | OH686_10695 | | hypothetical protein | insig. | 32 | 92 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23365 | | amino acid ABC transporter substrate-binding protein | insig. | 26 | 100 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1618 | | ABC-type amino acid transport, signal transduction systems, periplasmic component/domain | insig. | 33 | 80 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1616 | | hypothetical protein | insig. | 25 | 100 |
| | Shewanella oneidensis MR-1 | SO1143 | | conserved hypothetical protein (NCBI ptt file) | sig. | 28 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23355 | | ABC transporter substrate-binding protein | insig. | 32 | 80 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_08055 | | amino acid ABC transporter substrate-binding protein | cofit | 32 | 88 |
| | Shewanella sp. ANA-3 | Shewana3_0746 | | extracellular solute-binding protein (RefSeq) | insig. | 27 | 90 |
| | Shewanella sp. ANA-3 | Shewana3_0969 | | extracellular solute-binding protein (RefSeq) | insig. | 26 | 89 |
| | Rhizobium sp. OAE497 | ABIE40_RS13075 | | transporter substrate-binding domain-containing protein | insig. | 28 | 89 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0350 | | extracellular solute-binding protein family 3 (RefSeq) | insig. | 30 | 96 |
| | Shewanella oneidensis MR-1 | SO3860 | | conserved hypothetical protein (NCBI ptt file) | insig. | 27 | 90 |
| | Pseudomonas sp. S08-1 | OH686_10450 | | hypothetical protein | insig. | 31 | 80 |
| | Pseudomonas sp. S08-1 | OH686_07780 | | hypothetical protein | insig. | 30 | 89 |
| | Pseudomonas segetis P6 | ACVTMO_RS20455 | | substrate-binding periplasmic protein | cofit | 27 | 99 |
| | Pseudomonas sp. RS175 | PFR28_02343 | | hypothetical protein | insig. | 27 | 81 |
| | Shewanella amazonensis SB2B | Sama_2624 | | hypothetical protein (RefSeq) | insig. | 26 | 90 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22465 | | amino acid ABC transporter substrate-binding protein | insig. | 28 | 100 |
| | Pseudomonas protegens RBAN4 | FABNJH_15385 | | PBPb domain-containing protein | insig. | 26 | 86 |
| | Pseudomonas segetis P6 | ACVTMO_RS07335 | | substrate-binding periplasmic protein | insig. | 28 | 97 |
| | Pseudomonas sp. RS175 | PFR28_02523 | | hypothetical protein | sig. | 29 | 98 |
| | Pseudomonas sp. RS175 | PFR28_01730 | | hypothetical protein | insig. | 27 | 91 |
| | Azospirillum sp. SherDot2 | MPMX19_03365 | | hypothetical protein | insig. | 25 | 95 |
| | Pseudomonas protegens RBAN4 | FABNJH_17090 | | PBPb domain-containing protein | insig. | 26 | 88 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_27595 | | amino acid ABC transporter substrate-binding protein | insig. | 27 | 82 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1388 | | conserved hypothetical protein (TIGR) | insig. | 23 | 90 |
| | Shewanella sp. ANA-3 | Shewana3_1085 | | hypothetical protein (RefSeq) | cofit | 25 | 89 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_380 | | putative ABC transporter, periplasmic substrate-binding protein | insig. | 29 | 98 |
| | Pseudomonas sp. SVBP6 | COO64_RS17475 | | ABC transporter substrate-binding protein | insig. | 25 | 78 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1101 | | extracellular solute-binding protein family 3 (RefSeq) | sig. | 23 | 93 |
| | Pseudomonas sp. S08-1 | OH686_10830 | | ABC-type amino acid transport/signal transduction system, periplasmic component/domain | insig. | 28 | 88 |
| | Shewanella loihica PV-4 | Shew_2978 | | extracellular solute-binding protein (RefSeq) | insig. | 25 | 89 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22410 | | peptide ABC transporter ATP-binding protein | insig. | 26 | 98 |
| | Azospirillum brasilense Sp245 | AZOBR_RS18240 | | hypothetical protein | insig. | 23 | 91 |
| | Rhizobium sp. OAE497 | ABIE40_RS21005 | | ABC transporter substrate-binding protein | insig. | 26 | 89 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1049 | | periplasmic binding protein, putative | insig. | 26 | 100 |
| | Pseudomonas sp. DMC3 | GFF173 | | hypothetical protein | cofit | 25 | 100 |
| | Pseudomonas sp. S08-1 | OH686_12095 | | hypothetical protein | insig. | 28 | 78 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2383 | | periplasmic binding protein, putative | insig. | 24 | 98 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_826 | | ABC-type amino acid transport, signal transduction systems, periplasmic component/domain | insig. | 27 | 69 |
| | Azospirillum sp. SherDot2 | MPMX19_04714 | | L-cystine-binding protein FliY | insig. | 24 | 86 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_08025 | | amino acid ABC transporter substrate-binding protein | strong | 26 | 98 |
| | Shewanella oneidensis MR-1 | SO3481 | | conserved hypothetical protein (NCBI ptt file) | insig. | 25 | 88 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS28175 | | transporter substrate-binding domain-containing protein | insig. | 25 | 100 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS28175 | | transporter substrate-binding domain-containing protein | insig. | 25 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS14095 | | ABC transporter substrate-binding protein | insig. | 25 | 89 |
| | Azospirillum brasilense Sp245 | AZOBR_RS04520 | | hypothetical protein | insig. | 24 | 85 |
| | Pseudomonas simiae WCS417 | PS417_26520 | | amino acid ABC transporter substrate-binding protein | sig. | 24 | 100 |
| | Pseudomonas stutzeri RCH2 | Psest_0141 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | sig. | 24 | 92 |
| | Alteromonas macleodii MIT1002 | MIT1002_03749 | | Bacterial extracellular solute-binding proteins, family 3 | insig. | 35 | 26 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0298 | | amino acid ABC transporter substrate-binding protein, PAAT family | insig. | 22 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0298 | | amino acid ABC transporter substrate-binding protein, PAAT family | insig. | 22 | 100 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3266 | | conserved hypothetical protein (TIGR) | insig. | 24 | 61 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05435 | | hypothetical protein | insig. | 23 | 88 |
| | Alteromonas macleodii MIT1002 | MIT1002_00550 | | lysine-arginine-ornithine-binding periplasmic protein | insig. | 20 | 94 |
| | Pseudomonas segetis P6 | ACVTMO_RS05675 | | substrate-binding periplasmic protein | insig. | 23 | 87 |
| | Pseudomonas sp. S08-1 | OH686_03210 | | hypothetical protein | insig. | 24 | 98 |
| | Pseudomonas sp. S08-1 | OH686_07245 | | ABC-type amino acid transport/signal transduction system, periplasmic component/domain | insig. | 24 | 62 |
| | Marinobacter adhaerens HP15 | HP15_3113 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein | insig. | 24 | 97 |
| | Sinorhizobium meliloti 1021 | SMc00140 | | L-lysine ABC transporter, substrate-binding component (from data) | strong | 23 | 98 |
| | Rhizobium sp. OAE497 | ABIE40_RS24950 | | ABC transporter substrate-binding protein | cofit | 22 | 91 |
| | Sinorhizobium meliloti 1021 | SM_b20706 | | amino acid uptake ABC transporter substrate-binding protein precursor | insig. | 22 | 87 |
| | Pseudomonas sp. BP01 | JOY50_RS09800 | | ABC transporter substrate-binding protein | insig. | 25 | 76 |
| | Pseudomonas sp. S08-1 | OH686_20015 | | hypothetical protein | insig. | 23 | 77 |
| | Pseudomonas protegens RBAN4 | FABNJH_12360 | | Amino acid ABC transporter, periplasmic amino acid-binding protein | insig. | 23 | 89 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4912 | | amino acid ABC transporter substrate-binding protein, PAAT family | sig. | 24 | 87 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4912 | | amino acid ABC transporter substrate-binding protein, PAAT family | insig. | 24 | 87 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS21235 | | amino acid ABC transporter substrate-binding protein | insig. | 24 | 100 |
| | Pseudomonas sp. RS175 | PFR28_04203 | | putative amino-acid-binding protein YxeM | cofit | 23 | 100 |
| | Pseudomonas orientalis W4I3 | QF045_RS00915 | | transporter substrate-binding domain-containing protein | cofit | 22 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2409 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | insig. | 23 | 99 |
| | Pseudomonas putida KT2440 | PP_4979 | | putative Periplasmic binding protein | sig. | 23 | 73 |
| | Pseudomonas sp. S08-1 | OH686_07760 | | hypothetical protein | cofit | 25 | 84 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4153 | | periplasmic binding protein, putative | insig. | 24 | 88 |
| | Pseudomonas protegens RBAN4 | FABNJH_29235 | | Amino acid ABC transporter substrate-binding protein | insig. | 21 | 81 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4636 | | periplasmic binding protein, putative | strong | 23 | 93 |
| | Escherichia fergusonii Becca | EFB2_01549 | | Histidine-binding periplasmic protein | insig. | 25 | 87 |
| | Shewanella loihica PV-4 | Shew_3070 | | extracellular solute-binding protein (RefSeq) | insig. | 25 | 77 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2260 | | Hybrid sensory histidine kinase in two-component regulatory system with EvgA | insig. | 25 | 44 |
| | Marinobacter adhaerens HP15 | HP15_988 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein | insig. | 24 | 79 |
| | Shewanella amazonensis SB2B | Sama_1011 | | hypothetical protein (RefSeq) | insig. | 23 | 88 |
| | Pseudomonas sp. DMC3 | GFF145 | | hypothetical protein | insig. | 24 | 88 |
| | Pseudomonas putida KT2440 | PP_4955 | | conserved exported protein of unknown function | insig. | 23 | 98 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_3146 | | extracellular solute-binding protein family 3 (RefSeq) | insig. | 24 | 88 |