Homologs of GFF1262 from Methylophilus sp. DMC18

hypothetical protein

56 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methylophilus sp. DMC18 GFF1262 hypothetical protein cofit 100 100
o Dechlorosoma suillum PS Dsui_2443 putative metal-binding protein, possibly nucleic-acid binding protein insig. 31 95
  Acidovorax sp. GW101-3H11 Ac3H11_1583 COG1399 protein, clustered with ribosomal protein L32p cofit 35 73
o Pseudomonas aeruginosa PA14 IKLFDK_15115 metal-binding protein cofit 32 97
  Variovorax sp. OAS795 ABID97_RS08285 DUF177 domain-containing protein no data 35 75
o Shewanella oneidensis MR-1 SO2781 conserved hypothetical protein (NCBI ptt file) no data 34 94
o Shewanella sp. ANA-3 Shewana3_2563 hypothetical protein (RefSeq) no data 34 94
  Variovorax sp. SCN45 GFF3854 FIG01269488: protein, clustered with ribosomal protein L32p insig. 36 64
  Dickeya dadantii 3937 DDA3937_RS13145 23S rRNA accumulation protein YceD strong 36 56
  Dickeya dianthicola ME23 DZA65_RS13680 23S rRNA accumulation protein YceD no data 36 56
o Pectobacterium carotovorum WPP14 HER17_RS08625 23S rRNA accumulation protein YceD insig. 28 88
o Shewanella loihica PV-4 Shew_1598 hypothetical protein (RefSeq) no data 32 94
  Dickeya dianthicola 67-19 HGI48_RS13210 23S rRNA accumulation protein YceD insig. 37 54
  Erwinia amylovora T8 OLJFJH_15555 23S rRNA accumulation protein YceD sig. 34 61
o Ralstonia sp. UNC404CL21Col ABZR87_RS10120 YceD family protein insig. 34 89
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14405 metal-binding protein no data 31 93
o Ralstonia solanacearum UW163 UW163_RS11870 metal-binding protein no data 31 93
o Ralstonia solanacearum GMI1000 RS_RS05185 metal-binding protein insig. 33 90
  Klebsiella michiganensis M5al BWI76_RS11065 hypothetical protein no data 33 61
  Herbaspirillum seropedicae SmR1 HSERO_RS09580 DNA-binding protein no data 28 60
o Alteromonas macleodii MIT1002 MIT1002_01728 hypothetical protein no data 32 96
  Enterobacter sp. TBS_079 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD sig. 33 61
o Pseudomonas stutzeri RCH2 Psest_1684 Predicted metal-binding, possibly nucleic acid-binding protein no data 30 97
  Klebsiella pneumoniae MKP103 KDGMDA_18670 23S rRNA accumulation protein YceD sig. 31 61
  Escherichia coli BL21 ECD_01084 DUF177 family protein strong 32 61
  Escherichia fergusonii Becca EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD strong 32 61
  Escherichia coli ECOR27 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD insig. 32 61
  Escherichia coli ECOR38 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD strong 32 61
  Escherichia coli ECRC100 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD cofit 32 61
  Escherichia coli ECRC101 MCAODC_22960 yceD 23S rRNA accumulation protein YceD strong 32 61
  Escherichia coli ECRC102 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD strong 32 61
  Escherichia coli ECRC62 BNILDI_19290 yceD 23S rRNA accumulation protein YceD strong 32 61
  Escherichia coli ECRC98 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD strong 32 61
  Escherichia coli ECRC99 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD no data 32 61
  Escherichia coli Nissle 1917 ECOLIN_RS06290 23S rRNA accumulation protein YceD cofit 32 61
  Enterobacter asburiae PDN3 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein insig. 32 61
  Escherichia coli BW25113 b1088 yceD hypothetical protein (NCBI) strong 32 61
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00705 yceD 23S rRNA accumulation protein YceD no data 31 61
  Pantoea sp. MT58 IAI47_12095 23S rRNA accumulation protein YceD no data 35 61
  Erwinia tracheiphila SCR3 LU632_RS14845 yceD 23S rRNA accumulation protein YceD insig. 31 61
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02578 Large ribosomal RNA subunit accumulation protein YceD insig. 36 61
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3370 COG1399 protein, clustered with ribosomal protein L32p cofit 32 61
o Shewanella amazonensis SB2B Sama_1985 hypothetical protein (RefSeq) no data 30 94
  Serratia liquefaciens MT49 IAI46_09765 23S rRNA accumulation protein YceD no data 33 54
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05240 23S rRNA accumulation protein YceD cofit 34 61
  Pseudomonas sp. RS175 PFR28_03014 Large ribosomal RNA subunit accumulation protein YceD no data 30 97
  Rahnella sp. WP5 EX31_RS24410 23S rRNA accumulation protein YceD cofit 32 55
  Pseudomonas sp. S08-1 OH686_22120 protein, clustered with ribosomal protein L32p no data 38 55
  Vibrio cholerae E7946 ATCC 55056 CSW01_10120 23S rRNA accumulation protein YceD no data 27 94
  Castellaniella sp019104865 MT123 ABCV34_RS08395 YceD family protein insig. 28 62
  Ralstonia solanacearum PSI07 RPSI07_RS19055 metal-binding protein no data 32 89
  Marinobacter adhaerens HP15 HP15_2217 protein containing DUF177 no data 30 96
  Rhodanobacter sp. FW510-T8 OKGIIK_05695 Large ribosomal RNA subunit accumulation protein YceD insig. 30 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3330 COG1399 protein, clustered with ribosomal protein L32p no data 28 96
  Acinetobacter radioresistens SK82 MPMX26_02444 Large ribosomal RNA subunit accumulation protein YceD no data 32 65
  Acinetobacter baumannii LAC-4 RR41_RS15190 DUF177 domain-containing protein strong 28 65