Homologs of EX28DRAFT_2873 from Enterobacter asburiae PDN3

Uncharacterized protein conserved in bacteria
SEED: Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)

60 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Enterobacter asburiae PDN3	EX28DRAFT_2873		Uncharacterized protein conserved in bacteria	insig.	100	100
o	Enterobacter sp. TBS_079	MPMX20_03662		putative protein YqcC	insig.	95	100
o	Escherichia coli BL21	ECD_02637		DUF446 family protein	cofit	65	98
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00939		putative protein YqcC	insig.	65	98
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF4847		Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)	cofit	61	100
o	Klebsiella pneumoniae MKP103	KDGMDA_03380		tRNA pseudouridine synthase C	no data	72	100
o	Escherichia fergusonii Becca	EFB2_01125		putative protein YqcC	insig.	66	98
o	Escherichia coli ECRC100	OKFHMN_20205		tRNA pseudouridine synthase C	insig.	66	98
o	Escherichia coli ECRC101	MCAODC_10730		tRNA pseudouridine synthase C	insig.	66	98
o	Escherichia coli ECRC102	NIAGMN_17975		tRNA pseudouridine synthase C	cofit	66	98
o	Escherichia coli ECRC98	JDDGAC_23870		tRNA pseudouridine synthase C	insig.	66	98
o	Escherichia coli ECRC99	KEDOAH_07925		tRNA pseudouridine synthase C	no data	66	98
o	Escherichia coli ECOR27	NOLOHH_12085	yqcC	Uncharacterized protein YqcC	insig.	66	98
o	Escherichia coli ECRC62	BNILDI_10590	yqcC	Uncharacterized protein YqcC	insig.	66	98
o	Escherichia coli BW25113	b2792	yqcC	hypothetical protein (NCBI)	insig.	66	98
o	Escherichia coli ECOR38	HEPCGN_19460		tRNA pseudouridine synthase C	insig.	65	98
o	Escherichia coli Nissle 1917	ECOLIN_RS15555		YqcC family protein	insig.	65	98
o	Klebsiella michiganensis M5al	BWI76_RS22855		hypothetical protein	insig.	65	100
o	Pantoea agglomerans CFBP13505 P0401	PagCFBP13505_RS16910		YqcC family protein	cofit	52	96
o	Erwinia amylovora T8	OLJFJH_09215		tRNA pseudouridine synthase C	insig.	52	95
o	Pantoea sp. MT58	IAI47_04060		YqcC family protein	insig.	52	95
o	Erwinia tracheiphila HP pepo 2.2	IJEDHG_17315		tRNA pseudouridine synthase C	insig.	50	95
o	Erwinia tracheiphila SCR3	LU632_RS06290		YqcC family protein	insig.	50	95
o	Serratia liquefaciens MT49	IAI46_20305		YqcC family protein	insig.	49	98
o	Dickeya dadantii 3937	DDA3937_RS05080		YqcC family protein	insig.	48	95
o	Dickeya dianthicola 67-19	HGI48_RS05080		YqcC family protein	insig.	48	95
o	Dickeya dianthicola ME23	DZA65_RS05420		YqcC family protein	insig.	48	95
o	Pectobacterium carotovorum WPP14	HER17_RS16370		YqcC family protein	insig.	46	96
o	Rahnella sp. WP5	EX31_RS13070		YqcC family protein	insig.	49	76
o	Marinobacter adhaerens HP15	HP15_1304		protein containing DUF446	no data	42	89
o	Pseudomonas aeruginosa PA14	IKLFDK_30135		pseudouridine synthase	sig.	42	89
o	Pseudomonas stutzeri RCH2	Psest_1034		Uncharacterized protein conserved in bacteria	no data	43	91
o	Pseudomonas aeruginosa MRSN321	DY961_RS09225		YqcC family protein	sig.	42	89
o	Pseudomonas aeruginosa PUPa3	DQ20_RS52805		YqcC family protein	insig.	42	89
o	Pseudomonas sp. S08-1	OH686_08140		Uncharacterized protein YqcC	insig.	41	88
o	Pseudomonas segetis P6	MPMX49_01272		putative protein YqcC	insig.	34	94
o	Pseudomonas fluorescens FW300-N2C3	AO356_16160		pseudouridine synthase	insig.	42	88
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_2876		Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)	no data	41	75
o	Pseudomonas sp. RS175	PFR28_03701		hypothetical protein	insig.	43	87
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_5173		Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)	insig.	39	94
o	Shewanella oneidensis MR-1	SO1619		conserved hypothetical protein (NCBI ptt file)	sig.	41	95
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_1537		Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)	sig.	39	89
o	Vibrio cholerae E7946 ATCC 55056	CSW01_04550		pseudouridine synthase	insig.	35	85
	Pseudomonas sp. DMC3	GFF4048		hypothetical protein	no data	41	72
	Shewanella sp. ANA-3	Shewana3_2825		dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq)	cofit	40	71
	Shewanella amazonensis SB2B	Sama_1130		hypothetical protein (RefSeq)	insig.	39	89
	Pseudomonas putida KT2440	PP_4681		conserved protein of unknown function	strong	47	57
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_04914		putative protein YqcC	insig.	37	93
o	Pseudomonas fluorescens SBW25	PFLU_RS25655		YqcC family protein	insig.	39	92
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS25655		YqcC family protein	insig.	39	92
o	Pseudomonas orientalis W4I3	QF045_RS26075		YqcC family protein	insig.	38	92
	Pseudomonas sp. BP01	JOY50_RS27755		YqcC family protein	insig.	47	57
	Pseudomonas fluorescens FW300-N2E3	AO353_14485		pseudouridine synthase	sig.	42	59
o	Pseudomonas syringae pv. syringae B728a	Psyr_0844		Protein of unknown function DUF446	insig.	36	92
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_0844		Protein of unknown function DUF446	sig.	36	92
o	Pseudomonas simiae WCS417	PS417_23815		pseudouridine synthase	insig.	37	92
	Pseudomonas sp. SVBP6	COO64_RS15010		YqcC family protein	insig.	42	57
o	Shewanella loihica PV-4	Shew_2644		hypothetical protein (RefSeq)	insig.	31	91
	Kangiella aquimarina DSM 16071	B158DRAFT_1935		Uncharacterized protein conserved in bacteria	insig.	30	83
	Alteromonas macleodii MIT1002	MIT1002_00997		hypothetical protein	insig.	29	97