Homologs of DZA65_RS09490 from Dickeya dianthicola ME23

DEAD/DEAH box helicase
SEED: ATP-dependent RNA helicase YejH

99 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dickeya dianthicola ME23 DZA65_RS09490 DEAD/DEAH box helicase insig. 100 100
o Dickeya dianthicola 67-19 HGI48_RS09190 DEAD/DEAH box helicase insig. 98 100
o Dickeya dadantii 3937 DDA3937_RS09150 DEAD/DEAH box helicase insig. 95 100
o Pectobacterium carotovorum WPP14 HER17_RS12960 DEAD/DEAH box helicase family protein insig. 79 100
o Serratia liquefaciens MT49 IAI46_17350 DEAD/DEAH box helicase family protein insig. 78 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3752 ATP-dependent RNA helicase YejH insig. 75 100
o Klebsiella michiganensis M5al BWI76_RS19815 ATP-dependent helicase insig. 76 100
o Enterobacter sp. TBS_079 MPMX20_03150 Putative DNA repair helicase RadD insig. 76 100
o Escherichia coli ECRC101 OKFHMN_23355 radD Putative DNA repair helicase RadD insig. 75 100
o Escherichia coli ECRC101 MCAODC_14405 radD Putative DNA repair helicase RadD insig. 75 100
o Escherichia coli ECRC102 NIAGMN_21120 radD Putative DNA repair helicase RadD insig. 75 100
o Escherichia coli ECRC98 JDDGAC_27315 radD Putative DNA repair helicase RadD no data 75 100
o Escherichia coli ECRC99 KEDOAH_04830 radD Putative DNA repair helicase RadD no data 75 100
o Escherichia coli ECOR27 NOLOHH_14930 radD Putative DNA repair helicase RadD cofit 75 100
o Escherichia coli ECRC62 BNILDI_13850 radD Putative DNA repair helicase RadD insig. 75 100
o Escherichia coli ECOR38 HEPCGN_22620 radD Putative DNA repair helicase RadD cofit 74 100
o Enterobacter asburiae PDN3 EX28DRAFT_0377 DNA or RNA helicases of superfamily II insig. 75 100
o Escherichia coli BL21 ECD_02114 putative ATP-dependent DNA or RNA helicase cofit 75 100
o Escherichia coli BW25113 b2184 yejH DNA damage response helicase (yejH or radD) (from data) strong 75 100
o Escherichia fergusonii Becca EFB2_01672 Putative DNA repair helicase RadD insig. 74 100
o Escherichia coli Nissle 1917 ECOLIN_RS12765 DEAD/DEAH box helicase insig. 74 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01525 Putative DNA repair helicase RadD insig. 74 100
o Rahnella sp. WP5 EX31_RS19200 DEAD/DEAH box helicase insig. 75 100
o Pantoea sp. MT58 IAI47_06580 DEAD/DEAH box helicase insig. 75 100
o Erwinia tracheiphila SCR3 LU632_RS17600 DEAD/DEAH box helicase insig. 73 100
o Marinobacter adhaerens HP15 HP15_2832 DNA damage response helicase (yejH or radD) (from data) sig. 59 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_08225 ATP-dependent helicase insig. 57 97
o Shewanella sp. ANA-3 Shewana3_2524 type III restriction enzyme, res subunit (RefSeq) insig. 51 99
o Shewanella oneidensis MR-1 SO2744 DNA damage response helicase (yejH or radD) (from data) strong 51 99
o Shewanella amazonensis SB2B Sama_2080 DNA damage response helicase (yejH or radD) (from data) sig. 53 99
o Shewanella loihica PV-4 Shew_1532 type III restriction enzyme, res subunit (RefSeq) insig. 50 99
  Magnetospirillum magneticum AMB-1 AMB_RS01810 DNA helicase insig. 36 67
  Phocaeicola dorei CL03T12C01 ABI39_RS15790 DEAD/DEAH box helicase insig. 31 62
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18925 DEAD/DEAH box helicase cofit 31 62
  Bacteroides ovatus ATCC 8483 BACOVA_03889 helicase C-terminal domain protein insig. 32 62
  Phocaeicola dorei CL03T12C01 ABI39_RS11135 DEAD/DEAH box helicase sig. 29 62
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18545 DEAD/DEAH box helicase family protein insig. 29 62
  Phocaeicola dorei CL03T12C01 ABI39_RS16865 DEAD/DEAH box helicase insig. 28 62
  Phocaeicola dorei CL03T12C01 ABI39_RS14855 DEAD/DEAH box helicase insig. 28 62
  Synechococcus elongatus PCC 7942 Synpcc7942_0725 DEAD/DEAH box helicase-like insig. 27 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03500 DEAD/DEAH box helicase insig. 29 61
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16220 DEAD/DEAH box helicase insig. 28 61
  Phocaeicola dorei CL03T12C01 ABI39_RS20720 DEAD/DEAH box helicase insig. 28 61
  Phocaeicola dorei CL03T12C01 ABI39_RS12105 DEAD/DEAH box helicase insig. 28 61
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS0119825 DEAD/DEAH box helicase strong 25 62
  Dinoroseobacter shibae DFL-12 Dshi_0992 type III restriction protein res subunit (RefSeq) cofit 29 61
  Fusobacterium nucleatum SB010 HUW76_10085 DUF3427 domain-containing protein cofit 25 59
  Shewanella oneidensis MR-1 SO1408 helicase, putative (NCBI ptt file) insig. 27 61
  Variovorax sp. OAS795 ABID97_RS09635 DEAD/DEAH box helicase family protein insig. 27 58
  Shewanella oneidensis MR-1 SO0368 helicase (NCBI ptt file) insig. 28 59
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF788 ATP-dependent RNA helicase YejH cofit 25 64
  Bifidobacterium breve UCC2003 BBR_RS10690 DUF3427 domain-containing protein cofit 26 61
  Vibrio cholerae E7946 ATCC 55056 CSW01_04190 DEAD/DEAH box helicase insig. 25 61
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0384 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 25 62
  Escherichia coli ECOR38 HEPCGN_09450 hsdR DEAD/DEAH box helicase cofit 24 66
  Escherichia coli ECRC101 OKFHMN_11410 hsdR DEAD/DEAH box helicase insig. 24 66
  Escherichia coli ECRC101 MCAODC_01925 hsdR DEAD/DEAH box helicase insig. 24 66
  Escherichia coli ECRC102 NIAGMN_09260 hsdR DEAD/DEAH box helicase insig. 24 66
  Escherichia coli ECRC98 JDDGAC_15005 hsdR DEAD/DEAH box helicase no data 24 66
  Escherichia coli ECRC99 KEDOAH_16735 hsdR DEAD/DEAH box helicase no data 24 66
  Pseudomonas putida KT2440 PP_4740 Type I restriction enzyme EcoAI R protein insig. 24 66
  Escherichia coli ECRC101 OKFHMN_04370 DEAD/DEAH box helicase insig. 25 62
  Escherichia coli ECRC101 MCAODC_23715 DEAD/DEAH box helicase insig. 25 62
  Escherichia coli ECRC102 NIAGMN_03795 DEAD/DEAH box helicase insig. 25 62
  Escherichia coli ECRC98 JDDGAC_07975 DEAD/DEAH box helicase no data 25 62
  Escherichia coli ECRC99 KEDOAH_23540 DEAD/DEAH box helicase no data 25 62
  Shewanella sp. ANA-3 Shewana3_2963 hsdR type I restriction enzyme EcoKI subunit R (RefSeq) insig. 24 63
  Rhodanobacter sp. FW510-T8 OKGIIK_13985 Restriction endonuclease cofit 23 66
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1002 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 26 61
  Pantoea sp. MT58 IAI47_16555 type I restriction-modification system endonuclease insig. 25 61
  Shewanella oneidensis MR-1 SO4267 hsdR-2 type I restriction-modification system, R subunit (NCBI ptt file) insig. 24 63
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0422 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 24 64
  Escherichia coli BL21 ECD_04216 endonuclease R Type I restriction enzyme insig. 25 61
  Escherichia coli BW25113 b4350 hsdR endonuclease R (RefSeq) insig. 25 61
  Shewanella sp. ANA-3 Shewana3_2026 type III restriction enzyme, res subunit (RefSeq) insig. 24 62
  Pseudomonas stutzeri RCH2 Psest_3410 DNA or RNA helicases of superfamily II insig. 26 61
  Pseudomonas sp. RS175 PFR28_03895 hypothetical protein insig. 24 63
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3381 FOG: GGDEF domain insig. 26 60
  Castellaniella sp019104865 MT123 ABCV34_RS05460 DEAD/DEAH box helicase family protein insig. 25 61
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4151 Uncharacterized protein conserved in bacteria no data 29 26
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4206 Uncharacterized protein conserved in bacteria no data 29 26
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02600 Helicase associated domain protein insig. 25 62
  Serratia liquefaciens MT49 IAI46_02405 DEAD/DEAH box helicase family protein insig. 24 59
  Alteromonas macleodii MIT1002 MIT1002_00122 UvsW helicase insig. 32 25
  Variovorax sp. OAS795 ABID97_RS06745 ATP-dependent DNA helicase RecQ insig. 31 20
  Bacteroides ovatus ATCC 8483 BACOVA_04594 ATP-dependent DNA helicase RecQ insig. 28 26
  Rhodanobacter denitrificans MT42 LRK55_RS05060 DEAD/DEAH box helicase family protein cofit 42 10
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05280 DEAD/DEAH box helicase family protein insig. 42 10
  Rhodanobacter sp. FW510-T8 OKGIIK_01540 sSL2 restriction endonuclease subunit R insig. 42 10
  Serratia liquefaciens MT49 IAI46_24905 ATP-dependent DNA helicase RecG strong 36 12
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14585 DNA helicase RecQ strong 24 27
  Dinoroseobacter shibae DFL-12 Dshi_3695 type III restriction protein res subunit (RefSeq) no data 24 61
  Dinoroseobacter shibae DFL-12 Dshi_4007 type III restriction protein res subunit (RefSeq) no data 24 61
  Dickeya dadantii 3937 DDA3937_RS00170 ATP-dependent DNA helicase RecG strong 35 12
  Pectobacterium carotovorum WPP14 HER17_RS21395 ATP-dependent DNA helicase RecG strong 33 13
  Bacteroides stercoris CC31F HMPREF1181_RS14110 DNA helicase RecQ insig. 27 27
  Pectobacterium carotovorum WPP14 HER17_RS01395 ATP-dependent DNA helicase RecQ cofit 28 25
  Pseudomonas fluorescens GW456-L13 PfGW456L13_413 ATP-dependent DNA helicase, RecQ family insig. 30 25
  Shewanella amazonensis SB2B Sama_1273 DEAD/DEAH box helicase-like protein (RefSeq) no data 32 15