Homologs of CSW01_04550 from Vibrio cholerae E7946 ATCC 55056

pseudouridine synthase
SEED: Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)

52 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_04550 pseudouridine synthase insig. 100 100
o Shewanella loihica PV-4 Shew_2644 hypothetical protein (RefSeq) insig. 43 89
o Pectobacterium carotovorum WPP14 HER17_RS16370 YqcC family protein insig. 42 95
  Pantoea sp. MT58 IAI47_04060 YqcC family protein insig. 47 71
o Serratia liquefaciens MT49 IAI46_20305 YqcC family protein insig. 37 98
o Erwinia tracheiphila SCR3 LU632_RS06290 YqcC family protein insig. 39 88
o Rahnella sp. WP5 EX31_RS13070 YqcC family protein insig. 42 76
o Pseudomonas sp. S08-1 OH686_08140 Uncharacterized protein YqcC insig. 41 85
  Dickeya dianthicola ME23 DZA65_RS05420 YqcC family protein insig. 43 71
  Shewanella amazonensis SB2B Sama_1130 hypothetical protein (RefSeq) insig. 38 97
  Dickeya dianthicola 67-19 HGI48_RS05080 YqcC family protein insig. 43 71
o Erwinia amylovora T8 OLJFJH_09215 tRNA pseudouridine synthase C insig. 39 85
o Enterobacter asburiae PDN3 EX28DRAFT_2873 Uncharacterized protein conserved in bacteria insig. 35 88
  Enterobacter sp. TBS_079 MPMX20_03662 putative protein YqcC insig. 41 75
o Kangiella aquimarina DSM 16071 B158DRAFT_1935 Uncharacterized protein conserved in bacteria insig. 29 96
  Dickeya dadantii 3937 DDA3937_RS05080 YqcC family protein insig. 41 71
  Klebsiella michiganensis M5al BWI76_RS22855 hypothetical protein insig. 37 76
  Pseudomonas syringae pv. syringae B728a Psyr_0844 Protein of unknown function DUF446 insig. 55 51
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0844 Protein of unknown function DUF446 sig. 55 51
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4847 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) cofit 34 88
o Shewanella oneidensis MR-1 SO1619 conserved hypothetical protein (NCBI ptt file) sig. 34 86
o Shewanella sp. ANA-3 Shewana3_2825 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) cofit 34 88
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1537 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) sig. 34 93
  Pseudomonas sp. RS175 PFR28_03701 hypothetical protein insig. 54 54
  Pseudomonas fluorescens FW300-N2C3 AO356_16160 pseudouridine synthase insig. 54 54
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5173 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) insig. 54 54
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2876 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) no data 51 51
  Pseudomonas simiae WCS417 PS417_23815 pseudouridine synthase insig. 51 51
o Pseudomonas stutzeri RCH2 Psest_1034 Uncharacterized protein conserved in bacteria no data 37 87
  Pseudomonas sp. DMC3 GFF4048 hypothetical protein no data 49 51
o Escherichia coli ECOR38 HEPCGN_19460 tRNA pseudouridine synthase C insig. 33 81
  Pseudomonas fluorescens SBW25 PFLU_RS25655 YqcC family protein insig. 49 51
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25655 YqcC family protein insig. 49 51
o Escherichia coli BL21 ECD_02637 DUF446 family protein cofit 32 88
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00939 putative protein YqcC insig. 32 88
  Pseudomonas fluorescens FW300-N2E3 AO353_14485 pseudouridine synthase sig. 57 45
  Pseudomonas aeruginosa PA14 IKLFDK_30135 pseudouridine synthase insig. 53 46
  Pseudomonas sp. SVBP6 COO64_RS15010 YqcC family protein insig. 52 58
o Escherichia coli ECRC100 OKFHMN_20205 tRNA pseudouridine synthase C cofit 32 81
o Escherichia coli ECRC101 MCAODC_10730 tRNA pseudouridine synthase C insig. 32 81
o Escherichia coli ECRC102 NIAGMN_17975 tRNA pseudouridine synthase C insig. 32 81
o Escherichia coli ECRC98 JDDGAC_23870 tRNA pseudouridine synthase C cofit 32 81
o Escherichia coli ECRC99 KEDOAH_07925 tRNA pseudouridine synthase C no data 32 81
o Escherichia fergusonii Becca EFB2_01125 putative protein YqcC insig. 31 81
o Escherichia coli Nissle 1917 ECOLIN_RS15555 YqcC family protein insig. 32 81
  Pseudomonas putida KT2440 PP_4681 conserved protein of unknown function strong 52 49
  Pseudomonas sp. BP01 JOY50_RS27755 YqcC family protein insig. 60 39
o Escherichia coli ECOR27 NOLOHH_12085 yqcC Uncharacterized protein YqcC insig. 31 81
o Escherichia coli ECRC62 BNILDI_10590 yqcC Uncharacterized protein YqcC cofit 31 81
o Escherichia coli BW25113 b2792 yqcC hypothetical protein (NCBI) insig. 31 81
  Marinobacter adhaerens HP15 HP15_1304 protein containing DUF446 no data 33 69
  Alteromonas macleodii MIT1002 MIT1002_00997 hypothetical protein insig. 33 94