Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Klebsiella michiganensis M5al | BWI76_RS10640 | | AraC family transcriptional regulator | insig. | 100 | 100 |
| Escherichia coli ECRC101 | OKFHMN_13605 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 55 | 99 |
| Escherichia coli ECRC101 | MCAODC_04105 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 55 | 99 |
| Escherichia coli ECRC102 | NIAGMN_11355 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 55 | 99 |
| Escherichia coli ECRC98 | JDDGAC_17230 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | no data | 55 | 99 |
| Escherichia coli ECRC99 | KEDOAH_14555 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | no data | 55 | 99 |
| Escherichia coli ECOR27 | NOLOHH_05750 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 55 | 99 |
| Escherichia coli BW25113 | b3954 | yijO | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 55 | 99 |
| Escherichia coli ECOR38 | HEPCGN_12250 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 55 | 99 |
| Escherichia fergusonii Becca | EFB2_04660 | | HTH-type transcriptional activator RhaS | insig. | 55 | 99 |
| Escherichia coli Nissle 1917 | ECOLIN_RS22825 | | AraC family transcriptional regulator | insig. | 55 | 99 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2340 | | Transcriptional regulator, AraC family | insig. | 56 | 99 |
| Rahnella sp. WP5 | EX31_RS16720 | | helix-turn-helix domain-containing protein | sig. | 55 | 97 |
| Escherichia coli BL21 | ECD_03839 | | AraC family putative transcriptional activator | insig. | 55 | 99 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04096 | | HTH-type transcriptional activator RhaS | insig. | 55 | 99 |
| Escherichia coli ECRC62 | BNILDI_05775 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 54 | 99 |
| Rahnella sp. WP5 | EX31_RS14690 | | helix-turn-helix transcriptional regulator | insig. | 53 | 92 |
| Klebsiella michiganensis M5al | BWI76_RS00825 | | AraC family transcriptional regulator | insig. | 53 | 87 |
| Enterobacter sp. TBS_079 | MPMX20_04525 | | HTH-type transcriptional activator RhaR | insig. | 57 | 68 |
| Enterobacter asburiae PDN3 | EX28DRAFT_4417 | | Helix-turn-helix domain | insig. | 51 | 77 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_09150 | | AraC family transcriptional regulator | cofit | 31 | 97 |
| Escherichia coli ECRC101 | OKFHMN_22355 | ypdC | Uncharacterized HTH-type transcriptional regulator YpdC | insig. | 34 | 95 |
| Escherichia coli ECRC101 | MCAODC_12885 | ypdC | Uncharacterized HTH-type transcriptional regulator YpdC | insig. | 34 | 95 |
| Escherichia coli ECRC102 | NIAGMN_20130 | ypdC | Uncharacterized HTH-type transcriptional regulator YpdC | insig. | 34 | 95 |
| Escherichia coli ECRC98 | JDDGAC_26320 | ypdC | Uncharacterized HTH-type transcriptional regulator YpdC | no data | 34 | 95 |
| Escherichia coli ECRC99 | KEDOAH_05865 | ypdC | Uncharacterized HTH-type transcriptional regulator YpdC | no data | 34 | 95 |
| Escherichia coli Nissle 1917 | ECOLIN_RS13705 | | AraC family transcriptional regulator | insig. | 34 | 95 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01339 | | HTH-type transcriptional activator RhaR | insig. | 34 | 95 |
| Escherichia coli BW25113 | b2382 | ypdC | predicted DNA-binding protein (NCBI) | insig. | 34 | 95 |
| Escherichia coli BL21 | ECD_02292 | | putative DNA-binding protein | insig. | 34 | 95 |
| Escherichia coli ECOR27 | NOLOHH_14040 | ypdC | Uncharacterized HTH-type transcriptional regulator YpdC | cofit | 34 | 95 |
| Escherichia coli ECOR38 | HEPCGN_21565 | ypdC | Uncharacterized HTH-type transcriptional regulator YpdC | cofit | 34 | 95 |
| Escherichia coli ECRC62 | BNILDI_12895 | ypdC | Uncharacterized HTH-type transcriptional regulator YpdC | insig. | 34 | 95 |
| Escherichia fergusonii Becca | EFB2_01492 | | HTH-type transcriptional activator RhaR | insig. | 33 | 95 |
| Rhodospirillum rubrum S1H | Rru_A0919 | | Two Component Transcriptional Regulator, AraC family (NCBI) | insig. | 38 | 41 |
| Klebsiella michiganensis M5al | BWI76_RS23095 | | hypothetical protein | insig. | 36 | 36 |
| Variovorax sp. SCN45 | GFF1929 | | Transcriptional regulator, AraC family | insig. | 31 | 50 |
| Escherichia coli ECOR27 | NOLOHH_16025 | pocR | regulatory protein PocR | no data | 36 | 34 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3949 | | Propanediol utilization transcriptional activator | insig. | 37 | 34 |
| Klebsiella michiganensis M5al | BWI76_RS11895 | | AraC family transcriptional regulator | sig. | 37 | 36 |
| Variovorax sp. OAS795 | ABID97_RS20685 | | AraC family transcriptional regulator | insig. | 35 | 38 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_506 | | Transcriptional regulator, AraC family | insig. | 32 | 35 |
| Pseudomonas sp. RS175 | PFR28_03054 | | HTH-type transcriptional activator RhaS | cofit | 33 | 33 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5905 | | Transcriptional regulator of various polyols utilization, AraC family | insig. | 33 | 33 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_19930 | | AraC family transcriptional regulator | insig. | 33 | 33 |
| Rhodopseudomonas palustris CGA009 | TX73_010875 | | AraC family transcriptional regulator | insig. | 32 | 36 |
| Pseudomonas fluorescens SBW25 | PFLU_RS12720 | | AraC family transcriptional regulator | insig. | 34 | 40 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS12720 | | AraC family transcriptional regulator | insig. | 34 | 40 |
| Pseudomonas sp. S08-1 | OH686_02580 | | hypothetical protein | insig. | 33 | 35 |
| Burkholderia phytofirmans PsJN | BPHYT_RS25285 | | AraC family transcriptional regulator | insig. | 34 | 42 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_01620 | | AraC family transcriptional regulator | insig. | 33 | 33 |
| Pseudomonas putida KT2440 | PP_4605 | | Transcriptional regulator, AraC family | insig. | 31 | 49 |
| Pseudomonas simiae WCS417 | PS417_04130 | | AraC family transcriptional regulator | insig. | 31 | 38 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2062 | | Transcriptional regulator, AraC family | insig. | 31 | 33 |
| Klebsiella michiganensis M5al | BWI76_RS02750 | | DNA-binding transcriptional regulator AraC | insig. | 33 | 35 |
| Pseudomonas fluorescens SBW25 | PFLU_RS04170 | | GlxA family transcriptional regulator | insig. | 31 | 38 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS04170 | | GlxA family transcriptional regulator | insig. | 31 | 38 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1629 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 31 | 38 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_4499 | | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain | insig. | 33 | 34 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_968 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 31 | 38 |
| Sinorhizobium meliloti 1021 | SMa1823 | | Transcriptional regulator | insig. | 30 | 45 |
| Klebsiella michiganensis M5al | BWI76_RS00690 | | transcriptional activator RhaS | strong | 37 | 34 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03562 | | AraC family transcriptional regulator | insig. | 30 | 54 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS19325 | | AraC family transcriptional regulator | insig. | 29 | 34 |
| Pseudomonas syringae pv. syringae B728a | Psyr_4121 | | transcriptional regulator, AraC family with amidase-like domain protein | insig. | 31 | 39 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4121 | | transcriptional regulator, AraC family with amidase-like domain protein | insig. | 31 | 39 |
| Pseudomonas sp. RS175 | PFR28_03611 | | HTH-type transcriptional regulator CdhR | strong | 30 | 38 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_17040 | | AraC family transcriptional regulator | insig. | 30 | 38 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5332 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 30 | 38 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2266 | | L-rhamnose operon regulatory protein RhaS | insig. | 35 | 34 |
| Sinorhizobium meliloti 1021 | SMc02609 | | transcriptional regulator | insig. | 30 | 40 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2372 | | transcriptional regulator (NCBI ptt file) | sig. | 36 | 38 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS25180 | | AraC family transcriptional regulator | insig. | 33 | 35 |
| Pseudomonas sp. S08-1 | OH686_08420 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 32 | 36 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_15220 | | AraC family transcriptional regulator | insig. | 30 | 38 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1968 | | Transcriptional regulator, AraC family | insig. | 30 | 55 |
| Rahnella sp. WP5 | EX31_RS10900 | | helix-turn-helix domain-containing protein | insig. | 29 | 37 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2910 | | transcriptional regulator (NCBI ptt file) | insig. | 22 | 70 |
| Pseudomonas fluorescens SBW25 | PFLU_RS18110 | | GlxA family transcriptional regulator | insig. | 32 | 35 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS18110 | | GlxA family transcriptional regulator | insig. | 32 | 35 |
| Pseudomonas putida KT2440 | PP_1711 | | Transcriptional regulator, AraC family | insig. | 33 | 36 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF889 | | putative DNA-binding protein | insig. | 27 | 49 |
| Sinorhizobium meliloti 1021 | SMc01610 | | transcriptional regulator | insig. | 26 | 60 |
| Rhizobium sp. OAE497 | ABIE40_RS22540 | | AraC family transcriptional regulator | strong | 35 | 36 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 29 | 45 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 29 | 45 |
| Klebsiella michiganensis M5al | BWI76_RS27120 | | AraC family transcriptional regulator | insig. | 29 | 36 |
| Acinetobacter radioresistens SK82 | MPMX26_01480 | | putative HTH-type transcriptional regulator | no data | 30 | 49 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3044 | | Transcriptional regulator of various polyols utilization, AraC family | strong | 34 | 34 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5981 | | Transcriptional regulator, AraC family | insig. | 33 | 35 |
| Sinorhizobium meliloti 1021 | SM_b21649 | | AraC family transcriptional regulator | strong | 39 | 34 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS21220 | | AraC family transcriptional regulator | insig. | 42 | 28 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF176 | | Arabinose operon regulatory protein | insig. | 36 | 39 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3656 | | AraC-type DNA-binding domain-containing proteins | insig. | 35 | 34 |
| Enterobacter sp. TBS_079 | MPMX20_00758 | | Arabinose operon regulatory protein | sig. | 35 | 34 |
| Rahnella sp. WP5 | EX31_RS04165 | | HTH-type transcriptional activator RhaR | insig. | 33 | 36 |
| Pseudomonas putida KT2440 | PP_1313 | | Transcriptional regulator, AraC family | strong | 31 | 36 |
| Azospirillum brasilense Sp245 | AZOBR_RS03405 | | transcriptional regulator | insig. | 29 | 40 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00354 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 25 | 73 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS19905 | | AraC family transcriptional regulator | insig. | 34 | 34 |