Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Acidovorax sp. GW101-3H11 | Ac3H11_2290 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 100 | 100 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS14325 | | EAL domain-containing protein | insig. | 40 | 96 |
| Variovorax sp. SCN45 | GFF4241 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 47 | 60 |
| Variovorax sp. OAS795 | ABID97_RS05480 | | EAL domain-containing protein | strong | 46 | 59 |
o | Azospirillum sp. SherDot2 | MPMX19_06128 | | hypothetical protein | insig. | 35 | 99 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1143 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | sig. | 47 | 60 |
| Shewanella amazonensis SB2B | Sama_3627 | | signal transduction protein (RefSeq) | insig. | 49 | 48 |
| Acidovorax sp. GW101-3H11 | Ac3H11_402 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 51 | 48 |
| Azospirillum sp. SherDot2 | MPMX19_04839 | | hypothetical protein | insig. | 49 | 49 |
| Marinobacter adhaerens HP15 | HP15_780 | | sensory box/GGDEF family protein | insig. | 33 | 99 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3877 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 43 | 60 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4997 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 44 | 58 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1725 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | cofit | 50 | 49 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12780 | | diguanylate phosphodiesterase | sig. | 49 | 48 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4268 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 49 | 53 |
| Pseudomonas sp. S08-1 | OH686_04490 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 43 | 60 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2728 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 46 | 52 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1818 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 43 | 59 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3122 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 49 | 49 |
| Burkholderia phytofirmans PsJN | BPHYT_RS33250 | | diguanylate phosphodiesterase | insig. | 45 | 52 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2319 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 48 | 48 |
| Pseudomonas sp. S08-1 | OH686_11085 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 44 | 56 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS10125 | | diguanylate phosphodiesterase | insig. | 46 | 48 |
| Marinobacter adhaerens HP15 | HP15_4050 | | sensory box/GGDEF family protein | cofit | 48 | 50 |
| Castellaniella sp019104865 MT123 | ABCV34_RS14090 | | EAL domain-containing protein | cofit | 47 | 48 |
| Acidovorax sp. GW101-3H11 | Ac3H11_183 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 42 | 60 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS23840 | | hypothetical protein | sig. | 34 | 96 |
| Pseudomonas sp. RS175 | PFR28_02826 | | hypothetical protein | strong | 46 | 48 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_21390 | | histidine kinase | insig. | 46 | 47 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3950 | | Sensory box/GGDEF family protein | insig. | 46 | 48 |
| Pseudomonas putida KT2440 | PP_1983 | | PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase | insig. | 46 | 47 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_60 | | Sensory box/GGDEF family protein | insig. | 45 | 48 |
| Pseudomonas simiae WCS417 | PS417_18610 | | histidine kinase | sig. | 46 | 47 |
| Dechlorosoma suillum PS | Dsui_0894 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 47 | 49 |
| Pseudomonas fluorescens SBW25 | PFLU_RS20590 | | EAL domain-containing protein | insig. | 47 | 47 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS20590 | | EAL domain-containing protein | insig. | 47 | 47 |
| Pseudomonas sp. S08-1 | OH686_14965 | | Sensory box/GGDEF family protein | cofit | 45 | 50 |
| Pseudomonas stutzeri RCH2 | Psest_2392 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain | insig. | 44 | 50 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_20610 | | histidine kinase | insig. | 44 | 49 |
| Dechlorosoma suillum PS | Dsui_2148 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 42 | 57 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_17 | | Sensory box/GGDEF family protein | insig. | 45 | 48 |
| Dechlorosoma suillum PS | Dsui_2547 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | insig. | 40 | 61 |
| Dechlorosoma suillum PS | Dsui_1564 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 40 | 66 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1981 | | PAS:GGDEF | insig. | 46 | 47 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1981 | | PAS:GGDEF | insig. | 46 | 47 |
| Pseudomonas sp. RS175 | PFR28_03785 | | hypothetical protein | insig. | 44 | 48 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_15730 | | diguanylate phosphodiesterase | insig. | 44 | 48 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_14025 | | diguanylate phosphodiesterase | strong | 44 | 49 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1452 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | insig. | 44 | 48 |
| Pseudomonas syringae pv. syringae B728a | Psyr_4265 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 43 | 49 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4265 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 43 | 49 |
| Dechlorosoma suillum PS | Dsui_2160 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | insig. | 42 | 52 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5083 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | sig. | 44 | 48 |
| Pseudomonas simiae WCS417 | PS417_24275 | | diguanylate phosphodiesterase | strong | 44 | 48 |
| Pseudomonas fluorescens SBW25 | PFLU_RS26190 | | bifunctional diguanylate cyclase/phosphodiesterase | cofit | 44 | 48 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS26190 | | bifunctional diguanylate cyclase/phosphodiesterase | sig. | 44 | 48 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_23975 | | diguanylate cyclase | strong | 44 | 48 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2779 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | insig. | 44 | 48 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1530 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) | insig. | 45 | 50 |
| Magnetospirillum magneticum AMB-1 | AMB_RS06165 | | CBS domain-containing protein | insig. | 44 | 50 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4868 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 44 | 46 |
| Pseudomonas syringae pv. syringae B728a | Psyr_4642 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 43 | 50 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4642 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 43 | 50 |
| Pseudomonas sp. S08-1 | OH686_16235 | | Sensory box/GGDEF family protein | insig. | 44 | 48 |
| Dechlorosoma suillum PS | Dsui_1429 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 42 | 52 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3642 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 38 | 60 |
| Shewanella oneidensis MR-1 | SO0341 | | sensory box protein (NCBI ptt file) | insig. | 42 | 48 |
| Dechlorosoma suillum PS | Dsui_3161 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | sig. | 40 | 59 |
| Pseudomonas putida KT2440 | PP_0672 | | Sensory box protein | sig. | 43 | 48 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1728 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 44 | 46 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2512 | | sensory box/GGDEF domain/EAL domain protein | insig. | 43 | 48 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4790 | | sensory box/GGDEF domain/EAL domain protein | sig. | 43 | 48 |
| Dechlorosoma suillum PS | Dsui_0262 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 46 | 50 |
| Shewanella sp. ANA-3 | Shewana3_3829 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) | cofit | 42 | 48 |
| Pseudomonas sp. RS175 | PFR28_04079 | | Membrane-bound lytic murein transglycosylase F | insig. | 43 | 48 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_07390 | | diguanylate cyclase | insig. | 41 | 52 |
| Magnetospirillum magneticum AMB-1 | AMB_RS18310 | | bifunctional diguanylate cyclase/phosphodiesterase | cofit | 43 | 49 |
| Pseudomonas putida KT2440 | PP_3319 | | Sensory box protein/GGDEF domain protein | insig. | 44 | 50 |
| Dechlorosoma suillum PS | Dsui_3104 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | strong | 43 | 54 |
| Pseudomonas fluorescens SBW25 | PFLU_RS27540 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 43 | 48 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS27540 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 43 | 48 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_14260 | | diguanylate cyclase | insig. | 43 | 48 |
| Pseudomonas putida KT2440 | PP_0386 | | Sensory box protein | sig. | 41 | 52 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_03465 | | GGDEF-domain containing protein | cofit | 44 | 46 |
| Pseudomonas simiae WCS417 | PS417_25885 | | diguanylate cyclase | insig. | 43 | 48 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS22465 | | membrane protein | insig. | 45 | 48 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1185 | | sensory box/GGDEF domain/EAL domain protein | insig. | 43 | 48 |
| Dechlorosoma suillum PS | Dsui_2394 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | insig. | 42 | 54 |
| Variovorax sp. SCN45 | GFF1448 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | sig. | 42 | 51 |
| Shewanella oneidensis MR-1 | SO3389 | | sensory box protein (NCBI ptt file) | insig. | 42 | 48 |
| Dechlorosoma suillum PS | Dsui_0506 | | diguanylate cyclase (GGDEF) domain-containing protein | cofit | 45 | 48 |
| Magnetospirillum magneticum AMB-1 | AMB_RS22740 | | GGDEF domain-containing protein | insig. | 44 | 49 |
| Shewanella sp. ANA-3 | Shewana3_4029 | | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) | cofit | 43 | 53 |
| Rhodospirillum rubrum S1H | Rru_A3137 | | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) | insig. | 43 | 49 |
| Dechlorosoma suillum PS | Dsui_2365 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 43 | 49 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS18020 | | diguanylate cyclase | insig. | 42 | 52 |
| Magnetospirillum magneticum AMB-1 | AMB_RS11515 | | DUF3365 domain-containing protein | insig. | 44 | 50 |
| Shewanella sp. ANA-3 | Shewana3_1161 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) | insig. | 42 | 48 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS07670 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 46 | 45 |
| Magnetospirillum magneticum AMB-1 | AMB_RS21020 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 39 | 61 |