Homologs of Shew_1398 from Shewanella loihica PV-4

NusG antitermination factor (RefSeq)
SEED: Transcriptional activator RfaH
KEGG: transcriptional antiterminator RfaH

64 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_1398 NusG antitermination factor (RefSeq) strong 100 100
o Shewanella sp. ANA-3 Shewana3_1374 transcription antitermination protein nusG (RefSeq) strong 53 98
o Shewanella oneidensis MR-1 SO3194 transcriptional activator rfaH, putative (NCBI ptt file) strong 51 100
o Shewanella amazonensis SB2B Sama_2265 transcriptional activator rfaH, putative (RefSeq) strong 51 98
o Escherichia coli BL21 ECD_03733 transcription antitermination protein strong 31 100
o Escherichia coli ECOR27 NOLOHH_06395 rfaH transcription/translation regulatory transformer protein RfaH strong 31 100
o Escherichia coli ECOR38 HEPCGN_12895 rfaH transcription/translation regulatory transformer protein RfaH strong 31 100
o Escherichia coli ECRC101 OKFHMN_14265 rfaH transcription/translation regulatory transformer protein RfaH insig. 31 100
o Escherichia coli ECRC101 MCAODC_04770 rfaH transcription/translation regulatory transformer protein RfaH sig. 31 100
o Escherichia coli ECRC102 NIAGMN_12020 rfaH transcription/translation regulatory transformer protein RfaH strong 31 100
o Escherichia coli ECRC62 BNILDI_05135 rfaH transcription/translation regulatory transformer protein RfaH strong 31 100
o Escherichia coli ECRC98 JDDGAC_17890 rfaH transcription/translation regulatory transformer protein RfaH no data 31 100
o Escherichia coli ECRC99 KEDOAH_13885 rfaH transcription/translation regulatory transformer protein RfaH no data 31 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04211 Transcription antitermination protein RfaH cofit 31 100
o Escherichia coli BW25113 b3842 rfaH transcriptional activator RfaH (NCBI) strong 31 100
o Escherichia fergusonii Becca EFB2_04775 Transcription antitermination protein RfaH strong 31 100
o Escherichia coli Nissle 1917 ECOLIN_RS22150 transcription/translation regulatory transformer protein RfaH strong 31 100
o Enterobacter sp. TBS_079 MPMX20_04440 Transcription antitermination protein RfaH strong 32 100
o Klebsiella michiganensis M5al BWI76_RS01340 transcription/translation regulatory transformer protein RfaH no data 31 100
o Enterobacter asburiae PDN3 EX28DRAFT_4505 transcription elongation factor/antiterminator RfaH cofit 32 100
o Kangiella aquimarina DSM 16071 B158DRAFT_2343 transcriptional activator RfaH strong 34 91
o Pantoea sp. MT58 IAI47_18250 transcription/translation regulatory transformer protein RfaH strong 33 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF267 Transcriptional activator RfaH strong 31 100
o Herbaspirillum seropedicae SmR1 HSERO_RS02425 transcriptional activator strong 33 98
o Pseudomonas syringae pv. syringae B728a Psyr_3226 Transcriptional activator RfaH insig. 32 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3226 Transcriptional activator RfaH insig. 32 98
o Pseudomonas stutzeri RCH2 Psest_2605 transcriptional activator RfaH sig. 32 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5950 Transcriptional activator RfaH no data 29 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5081 Transcriptional activator RfaH no data 32 97
o Erwinia tracheiphila SCR3 LU632_RS23970 rfaH transcription/translation regulatory transformer protein RfaH strong 31 93
o Serratia liquefaciens MT49 IAI46_01105 transcription/translation regulatory transformer protein RfaH insig. 31 95
o Dickeya dadantii 3937 DDA3937_RS20290 transcription/translation regulatory transformer protein RfaH strong 33 96
o Dickeya dianthicola 67-19 HGI48_RS00935 transcription/translation regulatory transformer protein RfaH strong 29 99
o Dickeya dianthicola ME23 DZA65_RS00995 transcription/translation regulatory transformer protein RfaH cofit 29 99
o Rahnella sp. WP5 EX31_RS14590 transcription/translation regulatory transformer protein RfaH insig. 28 100
o Marinobacter adhaerens HP15 HP15_p187g93 transcriptional activator RfaH insig. 32 88
o Pectobacterium carotovorum WPP14 HER17_RS20570 transcription/translation regulatory transformer protein RfaH strong 31 96
o Magnetospirillum magneticum AMB-1 AMB_RS00245 transcriptional activator RfaH insig. 31 99
  Marinobacter adhaerens HP15 HP15_2404 transcriptional activator RfaH strong 33 77
o Vibrio cholerae E7946 ATCC 55056 CSW01_05050 transcription/translation regulatory transformer protein RfaH insig. 28 95
o Castellaniella sp019104865 MT123 ABCV34_RS12845 transcription termination/antitermination NusG family protein insig. 26 94
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01815 antitermination protein NusG cofit 26 94
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14250 UpxY family transcription antiterminator insig. 26 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07905 antitermination protein NusG insig. 27 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17370 UpxY family transcription antiterminator sig. 26 91
  Erwinia tracheiphila SCR3 LU632_RS25785 transcriptional antiterminator NusG insig. 27 70
  Phocaeicola dorei CL03T12C01 ABI39_RS13390 UpxY family transcription antiterminator insig. 26 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00925 UpxY family transcription antiterminator strong 26 79
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4415 Transcription antiterminator strong 22 79
  Serratia liquefaciens MT49 IAI46_22800 hypothetical protein insig. 24 91
  Bacteroides ovatus ATCC 8483 BACOVA_05504 transcription termination/antitermination factor NusG insig. 24 91
  Bacteroides thetaiotaomicron VPI-5482 BT0376 putative transcriptional regulator (NCBI ptt file) insig. 25 91
  Bacteroides thetaiotaomicron VPI-5482 BT1358 putative transcriptional regulator (NCBI ptt file) strong 23 91
  Bacteroides stercoris CC31F HMPREF1181_RS03935 UpxY family transcription antiterminator cofit 26 91
  Bacteroides thetaiotaomicron VPI-5482 BT1725 putative transcriptional regulator (NCBI ptt file) no data 23 91
  Bacteroides thetaiotaomicron VPI-5482 BT1656 putative transcriptional regulator (NCBI ptt file) sig. 23 91
  Bacteroides ovatus ATCC 8483 BACOVA_03746 transcription termination/antitermination factor NusG insig. 25 91
  Bacteroides ovatus ATCC 8483 BACOVA_02457 transcription termination/antitermination factor NusG insig. 25 91
  Bacteroides ovatus ATCC 8483 BACOVA_03690 transcription termination/antitermination factor NusG strong 23 91
  Bacteroides ovatus ATCC 8483 BACOVA_00196 transcription termination/antitermination factor NusG sig. 23 91
  Bacteroides thetaiotaomicron VPI-5482 BT0596 putative transcriptional regulator (NCBI ptt file) insig. 23 91
  Bacteroides ovatus ATCC 8483 BACOVA_01723 transcription termination/antitermination factor NusG insig. 24 91
  Bacteroides ovatus ATCC 8483 BACOVA_00023 transcription termination/antitermination factor NusG no data 26 79
  Desulfovibrio vulgaris Hildenborough JW710 DVU2923 nusG transcription antitermination protein NusG (TIGR) no data 21 97