| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.2282.1 | | tRNA:Cm32/Um32 methyltransferase | 1.0 | Xcc-8004.4416.1 | | hypothetical protein | 0.33 | 18 |
| Rhodanobacter denitrificans MT42 | 0.46 | LRK55_RS12670 | | RNA methyltransferase | 0.39 | LRK55_RS14610 | | nicotinamide riboside transporter PnuC | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_02340 | trmJ | RNA methyltransferase | 0.44 | OKGIIK_03665 | pnuC | nicotinamide riboside transporter PnuC | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS12970 | | RNA methyltransferase | 0.39 | LRK54_RS14895 | | nicotinamide riboside transporter PnuC | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.43 | AO356_06660 | | RNA methyltransferase | 0.45 | AO356_27785 | | aminotransferase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.43 | Pf6N2E2_3192 | | tRNA:Cm32/Um32 methyltransferase | 0.45 | Pf6N2E2_771 | | Ribosyl nicotinamide transporter, PnuC-like | low | > 103 |
| Pseudomonas sp. RS175 | 0.42 | PFR28_00283 | | 'tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ' transl_table=11 | 0.46 | PFR28_01687 | | Nicotinamide riboside transporter PnuC | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_15820 | | RNA methyltransferase | 0.47 | AO353_25770 | | aminotransferase | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS24870 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.45 | PFLU_RS13695 | | nicotinamide mononucleotide transporter | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS24870 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.45 | PFLU_RS13695 | | nicotinamide mononucleotide transporter | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_4876 | | tRNA:Cm32/Um32 methyltransferase | 0.47 | PfGW456L13_3015 | | Ribosyl nicotinamide transporter, PnuC-like | low | > 87 |
| Pseudomonas sp. S08-1 | 0.42 | OH686_17460 | | tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase | 0.34 | OH686_03340 | | Ribosyl nicotinamide transporter, PnuC-like | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_1234 | | RNA methyltransferase TrmH, group 1 | 0.45 | Psyr_3009 | | Nicotinamide mononucleotide transporter PnuC | low | > 86 |
| Pseudomonas simiae WCS417 | 0.42 | PS417_23215 | | RNA methyltransferase | 0.45 | PS417_13055 | | aminotransferase | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_1234 | | RNA methyltransferase TrmH, group 1 | 0.45 | Psyr_3009 | | Nicotinamide mononucleotide transporter PnuC | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_868 | | tRNA:Cm32/Um32 methyltransferase | 0.47 | Pf1N1B4_4739 | | Ribosyl nicotinamide transporter, PnuC-like | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_1248 | | RNA methyltransferase, TrmH family, group 1 | 0.40 | Psest_2099 | | nicotinamide mononucleotide transporter PnuC | low | > 67 |
| Pseudomonas putida KT2440 | 0.40 | PP_0839 | | tRNA Cm32/Um32 methyltransferase | 0.45 | PP_2860 | | putative Nicotinamide mononucleotide transporter | low | > 96 |
| Enterobacter sp. TBS_079 | 0.39 | MPMX20_03413 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ | 0.24 | MPMX20_00270 | | Nicotinamide riboside transporter PnuC | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.39 | GFF2437 | | tRNA:Cm32/Um32 methyltransferase | 0.21 | GFF5 | | Ribosyl nicotinamide transporter, PnuC-like | — | — |
| Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_0107 | | RNA methyltransferase, TrmH family, group 1 | 0.22 | EX28DRAFT_2244 | | nicotinamide mononucleotide transporter PnuC | low | > 76 |
| Rahnella sp. WP5 | 0.38 | EX31_RS20555 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.23 | EX31_RS23530 | | nicotinamide riboside transporter PnuC | low | > 89 |
| Klebsiella michiganensis M5al | 0.38 | BWI76_RS21170 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.21 | BWI76_RS01015 | | nicotinamide riboside transporter PnuC | low | > 92 |
| Shewanella loihica PV-4 | 0.38 | Shew_2320 | | RNA methyltransferase (RefSeq) | 0.23 | Shew_1737 | | nicotinamide mononucleotide transporter PnuC (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.38 | MIT1002_02806 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ | 0.21 | MIT1002_01174 | | nicotinamide riboside transporter PnuC | low | > 70 |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_19380 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.20 | NIAGMN_04805 | pnuC | nicotinamide riboside transporter PnuC | — | — |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_06610 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.20 | KEDOAH_21210 | pnuC | nicotinamide riboside transporter PnuC | — | — |
| Escherichia coli ECOR38 | 0.38 | HEPCGN_20750 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.20 | HEPCGN_01520 | pnuC | nicotinamide riboside transporter PnuC | low | > 87 |
| Escherichia coli ECRC100 | 0.38 | OKFHMN_21610 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.20 | OKFHMN_06755 | pnuC | nicotinamide riboside transporter PnuC | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.38 | B158DRAFT_1456 | | RNA methyltransferase, TrmH family, group 1 | 0.20 | B158DRAFT_1784 | | nicotinamide mononucleotide transporter PnuC | low | > 40 |
| Escherichia coli ECRC62 | 0.38 | BNILDI_12080 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.20 | BNILDI_21180 | pnuC | nicotinamide riboside transporter PnuC | low | > 75 |
| Escherichia coli ECRC101 | 0.38 | MCAODC_12140 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.20 | MCAODC_25975 | pnuC | nicotinamide riboside transporter PnuC | low | > 87 |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_25285 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.20 | JDDGAC_10410 | pnuC | nicotinamide riboside transporter PnuC | low | > 86 |
| Escherichia coli Nissle 1917 | 0.37 | ECOLIN_RS14375 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.24 | ECOLIN_RS23410 | | nicotinamide riboside transporter PnuC | — | — |
| Escherichia coli BL21 | 0.37 | ECD_02424 | | tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent | 0.20 | ECD_00704 | | nicotinamide riboside transporter | low | > 61 |
| Escherichia coli BW25113 | 0.37 | b2532 | yfhQ | predicted methyltransferase (NCBI) | 0.20 | b0751 | pnuC | predicted nicotinamide mononucleotide transporter (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.37 | OHPLBJKB_01177 | | 'tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ' transl_table=11 | 0.20 | OHPLBJKB_02962 | | Nicotinamide riboside transporter PnuC | low | > 73 |
| Escherichia coli ECOR27 | 0.37 | NOLOHH_13280 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.20 | NOLOHH_23185 | pnuC | nicotinamide riboside transporter PnuC | low | > 75 |
| Escherichia fergusonii Becca | 0.37 | EFB2_01358 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ | 0.20 | EFB2_03355 | | Nicotinamide riboside transporter PnuC | low | > 86 |
| Shewanella oneidensis MR-1 | 0.37 | SO2261 | | RNA methyltransferase, TrmH family, group 1 (NCBI ptt file) | 0.25 | SO2713 | | transporter, putative (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_2283 | | RNA methyltransferase (RefSeq) | 0.25 | Shewana3_2498 | | nicotinamide mononucleotide transporter PnuC (RefSeq) | low | > 73 |
| Serratia liquefaciens MT49 | 0.37 | IAI46_19365 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.23 | IAI46_06385 | | nicotinamide riboside transporter PnuC | low | > 86 |
| Dickeya dianthicola ME23 | 0.36 | DZA65_RS16730 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.19 | DZA65_RS06950 | | nicotinamide riboside transporter PnuC | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.36 | HER17_RS06005 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.20 | HER17_RS14815 | | nicotinamide riboside transporter PnuC | low | > 75 |
| Dickeya dadantii 3937 | 0.36 | DDA3937_RS15555 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.16 | DDA3937_RS06550 | | nicotinamide riboside transporter PnuC | low | > 74 |
| Dickeya dianthicola 67-19 | 0.35 | HGI48_RS15655 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.19 | HGI48_RS06600 | | nicotinamide riboside transporter PnuC | low | > 71 |
| Shewanella amazonensis SB2B | 0.35 | Sama_1290 | | RNA methyltransferase (RefSeq) | 0.28 | Sama_1453 | | transporter, putative (RefSeq) | low | > 62 |
| Pantoea sp. MT58 | 0.35 | IAI47_04995 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.22 | IAI47_13630 | | nicotinamide riboside transporter PnuC | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.34 | LU632_RS17880 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | 0.19 | LU632_RS15955 | pnuC | nicotinamide riboside transporter PnuC | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.33 | HSERO_RS08585 | | RNA methyltransferase | 0.27 | HSERO_RS13900 | | transporter | low | > 78 |
| Acinetobacter radioresistens SK82 | 0.30 | MPMX26_01876 | | tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ | 0.37 | MPMX26_02361 | | hypothetical protein | low | > 36 |
| Variovorax sp. OAS795 | 0.29 | ABID97_RS20730 | | RNA methyltransferase | 0.25 | ABID97_RS20205 | | nicotinamide riboside transporter PnuC | 0.28 | 38 |
| Variovorax sp. SCN45 | 0.28 | GFF4680 | | tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200) | 0.24 | GFF2755 | | Ribosyl nicotinamide transporter, PnuC-like | low | > 127 |
| Sphingomonas koreensis DSMZ 15582 | 0.24 | Ga0059261_1984 | | rRNA methylase | 0.32 | Ga0059261_3974 | | nicotinamide mononucleotide transporter PnuC | low | > 68 |
Not shown: 33 genomes with orthologs for Xcc-8004.2282.1 only; 10 genomes with orthologs for Xcc-8004.4416.1 only