Conservation of cofitness between SMc03006 and SMc01564 in Sinorhizobium meliloti 1021

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc03006 chemotaxis regulator protein 1.0 SMc01564 L-threonine 3-dehydrogenase 0.21 17
Rhizobium sp. OAE497 0.94 ABIE40_RS02870 chemotaxis response regulator CheY1 0.93 ABIE40_RS12725 L-threonine 3-dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.62 A4249_RS15560 response regulator 0.58 A4249_RS02510 L-threonine 3-dehydrogenase low > 48
Phaeobacter inhibens DSM 17395 0.57 PGA1_262p02130 response regulator receiver 0.60 PGA1_c34320 L-threonine 3-dehydrogenase (EC 1.1.1.103) (from data) low > 62
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_1121 Response regulator receiver domain 0.55 Ga0059261_2605 Threonine dehydrogenase and related Zn-dependent dehydrogenases — —
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_19555 response regulator 0.70 CSW01_18565 L-threonine 3-dehydrogenase low > 62
Shewanella oneidensis MR-1 0.48 SO2318 cheY-2 chemotaxis protein CheY (NCBI ptt file) 0.70 SO4673 tdh threonine 3-dehydrogenase (NCBI ptt file) low > 76
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02885 ompR response regulator 0.63 OKGIIK_06605 tdh L-threonine 3-dehydrogenase low > 52
Lysobacter sp. OAE881 0.47 ABIE51_RS16910 response regulator 0.61 ABIE51_RS06140 L-threonine 3-dehydrogenase low > 62
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS13635 response regulator 0.64 LRK54_RS00650 L-threonine 3-dehydrogenase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.2861.1 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.60 Xcc-8004.4082.1 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 74
Shewanella loihica PV-4 0.47 Shew_0114 response regulator receiver protein (RefSeq) 0.71 Shew_3710 tdh L-threonine 3-dehydrogenase (RefSeq) low > 60
Rhodanobacter denitrificans MT42 0.47 LRK55_RS13375 response regulator 0.64 LRK55_RS00420 L-threonine 3-dehydrogenase low > 63
Shewanella amazonensis SB2B 0.46 Sama_3494 response regulator receiver protein (RefSeq) 0.71 Sama_0097 tdh L-threonine 3-dehydrogenase (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS22235 response regulator 0.62 ABZR86_RS08385 L-threonine 3-dehydrogenase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF1475 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.24 GFF1899 L-threonine 3-dehydrogenase (EC 1.1.1.103) — —
Shewanella sp. ANA-3 0.45 Shewana3_2219 response regulator receiver protein (RefSeq) 0.69 Shewana3_4105 tdh L-threonine 3-dehydrogenase (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_05741 two-component system, chemotaxis family, response regulator CheY 0.67 H281DRAFT_03586 L-threonine 3-dehydrogenase low > 103
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS19005 chemotaxis protein CheY 0.67 BPHYT_RS34650 l-threonine 3-dehydrogenase low > 109
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS29015 response regulator 0.68 QEN71_RS16540 L-threonine 3-dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.42 ABIE53_000126 two-component system chemotaxis response regulator CheY 0.65 ABIE53_004673 threonine 3-dehydrogenase low > 113
Castellaniella sp019104865 MT123 0.35 ABCV34_RS05810 chemotaxis response regulator CheY 0.69 ABCV34_RS14100 L-threonine 3-dehydrogenase low > 48
Serratia liquefaciens MT49 0.35 IAI46_16010 chemotaxis response regulator CheY 0.73 IAI46_24725 L-threonine 3-dehydrogenase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF1663 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.73 GFF394 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 78
Pectobacterium carotovorum WPP14 0.35 HER17_RS08125 chemotaxis response regulator CheY 0.72 HER17_RS20760 L-threonine 3-dehydrogenase low > 75
Pantoea sp. MT58 0.34 IAI47_08335 chemotaxis response regulator CheY 0.71 IAI47_00700 L-threonine 3-dehydrogenase low > 76
Escherichia coli ECRC99 0.34 KEDOAH_01950 cheY chemotaxis regulatory protein CheY 0.73 KEDOAH_12435 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC102 0.34 NIAGMN_01905 cheY chemotaxis regulatory protein CheY 0.73 NIAGMN_13475 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC101 0.34 OKFHMN_26155 cheY chemotaxis regulatory protein CheY 0.73 OKFHMN_15715 tdh L-threonine 3-dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01846 Chemotaxis protein CheY 0.73 OHPLBJKB_00083 L-threonine 3-dehydrogenase low > 73
Escherichia coli BW25113 0.34 b1882 cheY chemotaxis regulator transmitting signal to flagellar motor component (NCBI) 0.73 b3616 tdh L-threonine 3-dehydrogenase (NCBI) low > 76
Escherichia coli ECRC62 0.34 BNILDI_15385 cheY chemotaxis regulatory protein CheY 0.73 BNILDI_03920 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC101 0.34 MCAODC_19250 cheY chemotaxis regulatory protein CheY 0.73 MCAODC_06225 tdh L-threonine 3-dehydrogenase — —
Escherichia coli BL21 0.34 ECD_01853 chemotaxis regulator transmitting signal to flagellar motor component 0.73 ECD_03474 L-threonine 3-dehydrogenase, NAD(P)-binding — —
Escherichia coli ECOR27 0.34 NOLOHH_16595 cheY chemotaxis regulatory protein CheY 0.73 NOLOHH_07595 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC98 0.34 JDDGAC_00730 cheY chemotaxis regulatory protein CheY 0.73 JDDGAC_19340 tdh L-threonine 3-dehydrogenase — —
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_0188 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.67 B158DRAFT_0285 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 40
Rahnella sp. WP5 0.34 EX31_RS11355 chemotaxis protein CheY 0.70 EX31_RS14385 L-threonine 3-dehydrogenase low > 89
Escherichia coli Nissle 1917 0.34 ECOLIN_RS10750 chemotaxis response regulator CheY 0.73 ECOLIN_RS20635 L-threonine 3-dehydrogenase — —
Escherichia fergusonii Becca 0.34 EFB2_02061 Chemotaxis protein CheY 0.73 EFB2_00194 L-threonine 3-dehydrogenase low > 86
Escherichia coli ECOR38 0.34 HEPCGN_04575 cheY chemotaxis regulatory protein CheY 0.73 HEPCGN_14555 tdh L-threonine 3-dehydrogenase low > 85
Enterobacter sp. TBS_079 0.33 MPMX20_02786 Chemotaxis protein CheY 0.74 MPMX20_00116 L-threonine 3-dehydrogenase low > 85

Not shown: 34 genomes with orthologs for SMc03006 only; 5 genomes with orthologs for SMc01564 only