Conservation of cofitness between SMc00527 and SMc00033 in Sinorhizobium meliloti 1021

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00527 anhydro-N-acetylmuramic acid kinase 1.0 SMc00033 hypothetical protein 0.57 4
Rhizobium sp. OAE497 0.68 ABIE40_RS10025 anhydro-N-acetylmuramic acid kinase 0.62 ABIE40_RS04540 EAL domain-containing protein low > 107
Agrobacterium fabrum C58 0.60 Atu1827 hypothetical protein 0.61 Atu0826 hypothetical protein low > 89
Rhodospirillum rubrum S1H 0.38 Rru_A2031 Protein of unknown function UPF0075 (NCBI) 0.27 Rru_A3230 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) low > 58
Azospirillum sp. SherDot2 0.34 MPMX19_01987 Anhydro-N-acetylmuramic acid kinase 0.29 MPMX19_00227 hypothetical protein low > 112
Magnetospirillum magneticum AMB-1 0.33 AMB_RS15285 anhydro-N-acetylmuramic acid kinase 0.30 AMB_RS05620 GGDEF domain-containing protein low > 64
Shewanella oneidensis MR-1 0.26 SO1313 conserved hypothetical protein (NCBI ptt file) 0.19 SO0555 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.26 Shewana3_3060 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) 0.19 Shewana3_0554 diguanylate cyclase/phosphodiesterase (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS26820 anhydro-N-acetylmuramic acid kinase 0.19 QEN71_RS00990 phosphodiesterase low > 153
Acidovorax sp. GW101-3H11 0.24 Ac3H11_3055 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.16 Ac3H11_1101 diguanylate cyclase/phosphodiesterase low > 79
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_04259 anhydro-N-acetylmuramic acid kinase 0.19 H281DRAFT_02115 diguanylate cyclase/phosphodiesterase low > 103
Shewanella amazonensis SB2B 0.24 Sama_0848 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) 0.19 Sama_3153 putative diguanylate phosphodiesterase (RefSeq) low > 62
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS16645 anhydro-N-acetylmuramic acid kinase 0.19 BPHYT_RS02060 diguanylate cyclase low > 109
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_1235 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.22 PfGW456L13_4208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) low > 87
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_2562 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.22 Pf1N1B4_3740 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) — —
Shewanella loihica PV-4 0.23 Shew_1020 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) 0.20 Shew_0436 diguanylate cyclase/phosphodiesterase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_14500 anhydro-N-acetylmuramic acid kinase 0.21 AO356_19330 diguanylate phosphodiesterase low > 104
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_07145 anhydro-N-acetylmuramic acid kinase 0.21 AO353_02445 diguanylate phosphodiesterase low > 101
Pseudomonas simiae WCS417 0.22 PS417_25650 anhydro-N-acetylmuramic acid kinase 0.21 PS417_09320 diguanylate phosphodiesterase low > 88
Pseudomonas fluorescens FW300-N2E2 0.22 Pf6N2E2_4838 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.22 Pf6N2E2_5779 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) low > 103
Pseudomonas sp. RS175 0.22 PFR28_04031 Anhydro-N-acetylmuramic acid kinase 0.21 PFR28_03170 hypothetical protein low > 88
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS02010 anhydro-N-acetylmuramic acid kinase 0.19 HSERO_RS09540 diguanylate cyclase low > 78
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_4567 Protein of unknown function UPF0075 0.22 Psyr_1598 diguanylate cyclase/phosphodiesterase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_4567 Protein of unknown function UPF0075 0.22 Psyr_1598 diguanylate cyclase/phosphodiesterase low > 86
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase 0.21 PFLU_RS09975 EAL and GGDEF domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase 0.21 PFLU_RS09975 EAL and GGDEF domain-containing protein low > 109
Variovorax sp. SCN45 0.21 GFF2064 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) 0.17 GFF6204 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) low > 127
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_15705 anhydro-N-acetylmuramic acid kinase 0.16 OKGIIK_13885 eAL phosphodiesterase low > 52
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS02660 anhydro-N-acetylmuramic acid kinase 0.17 RR42_RS35575 diguanylate cyclase low > 128
Rhodanobacter denitrificans FW104-10B01 0.20 LRK54_RS09210 anhydro-N-acetylmuramic acid kinase 0.16 LRK54_RS13860 phosphodiesterase low > 59
Rhodanobacter denitrificans MT42 0.20 LRK55_RS08740 anhydro-N-acetylmuramic acid kinase 0.16 LRK55_RS13575 GGDEF domain-containing protein low > 63
Ralstonia solanacearum PSI07 0.20 RPSI07_RS21585 anhydro-N-acetylmuramic acid kinase 0.16 RPSI07_RS01135 phosphodiesterase low > 81
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS07595 anhydro-N-acetylmuramic acid kinase 0.17 ABZR87_RS22805 phosphodiesterase low > 80
Castellaniella sp019104865 MT123 0.17 ABCV34_RS10575 anhydro-N-acetylmuramic acid kinase 0.17 ABCV34_RS04665 GGDEF domain-containing protein low > 48

Not shown: 52 genomes with orthologs for SMc00527 only; 1 genomes with orthologs for SMc00033 only