Conservation of cofitness between SMc00923 and SM_b21051 in Sinorhizobium meliloti 1021

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00923 DNA-3-methyladenine DNA glycosylase 1.0 SM_b21051 udpglucosegdpmannose dehydrogenase 0.24 2
Phaeobacter inhibens DSM 17395 0.56 PGA1_c22000 putative DNA-3-methyladenine glycosylase 1 0.25 PGA1_262p02300 UDP-glucose/GDP-mannose dehydrogenase low > 62
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS01545 DNA-3-methyladenine glycosylase I 0.25 ABZR86_RS18500 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB low > 74
Bosea sp. OAE506 0.44 ABIE41_RS09690 DNA-3-methyladenine glycosylase I 0.63 ABIE41_RS14415 nucleotide sugar dehydrogenase low > 77
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS19650 DNA-3-methyladenine glycosylase 0.25 CA265_RS19305 Vi polysaccharide biosynthesis protein VipA/TviB low > 88
Escherichia coli BL21 0.43 ECD_03399 3-methyl-adenine DNA glycosylase I, constitutive 0.24 ECD_03665 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase low > 60
Escherichia coli ECRC101 0.43 MCAODC_06555 tag DNA-3-methyladenine glycosylase I 0.24 MCAODC_05070 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECOR38 0.43 HEPCGN_14930 tag DNA-3-methyladenine glycosylase I 0.24 HEPCGN_13275 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 85
Escherichia fergusonii Becca 0.43 EFB2_00258 DNA-3-methyladenine glycosylase 1 0.24 EFB2_04852 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Escherichia coli Nissle 1917 0.43 ECOLIN_RS20310 DNA-3-methyladenine glycosylase I 0.24 ECOLIN_RS21740 UDP-N-acetyl-D-mannosamine dehydrogenase low > 52
Escherichia coli ECRC101 0.43 OKFHMN_16040 tag DNA-3-methyladenine glycosylase I 0.24 OKFHMN_14565 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECRC102 0.43 NIAGMN_13800 tag DNA-3-methyladenine glycosylase I 0.24 NIAGMN_12320 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECRC99 0.43 KEDOAH_12110 tag DNA-3-methyladenine glycosylase I 0.24 KEDOAH_13585 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECRC98 0.43 JDDGAC_19670 tag DNA-3-methyladenine glycosylase I 0.24 JDDGAC_18190 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECOR27 0.42 NOLOHH_07985 tag DNA-3-methyladenine glycosylase I 0.24 NOLOHH_06700 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 57
Enterobacter asburiae PDN3 0.42 EX28DRAFT_3809 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) 0.25 EX28DRAFT_4457 nucleotide sugar dehydrogenase low > 76
Escherichia coli ECRC62 0.42 BNILDI_03560 tag DNA-3-methyladenine glycosylase I 0.24 BNILDI_04825 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_00157 DNA-3-methyladenine glycosylase 1 0.24 OHPLBJKB_04267 UDP-N-acetyl-D-mannosamine dehydrogenase low > 73
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS13585 DNA-3-methyladenine glycosylase I 0.25 HMPREF1078_RS17475 nucleotide sugar dehydrogenase low > 61
Escherichia coli BW25113 0.42 b3549 tag 3-methyl-adenine DNA glycosylase I, constitutive (NCBI) 0.24 b3787 rffD UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) low > 76
Klebsiella michiganensis M5al 0.42 BWI76_RS26920 DNA-3-methyladenine glycosylase I 0.24 BWI76_RS01095 UDP-N-acetyl-D-mannosamine dehydrogenase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF463 DNA-3-methyladenine glycosylase (EC 3.2.2.20) 0.24 GFF2886 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 78
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS20195 DNA-3-methyladenine glycosylase I 0.27 ABZR88_RS08975 nucleotide sugar dehydrogenase low > 71
Enterobacter sp. TBS_079 0.41 MPMX20_00185 DNA-3-methyladenine glycosylase 1 0.24 MPMX20_04486 UDP-N-acetyl-D-mannosamine dehydrogenase low > 85
Bacteroides thetaiotaomicron VPI-5482 0.41 BT2400 DNA-3-methyladenine glycosylase I (NCBI ptt file) 0.22 BT0602 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI ptt file) low > 81
Paraburkholderia graminis OAS925 0.41 ABIE53_000137 DNA-3-methyladenine glycosylase I 0.25 ABIE53_000508 UDP-N-acetyl-D-galactosamine dehydrogenase low > 113
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS05865 DNA-3-methyladenine glycosylase I 0.44 HMPREF1181_RS14975 nucleotide sugar dehydrogenase low > 56
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_08405 DNA-3-methyladenine glycosylase I 0.24 CSW01_04710 UDP-N-acetyl-D-mannosamine dehydrogenase low > 62
Pectobacterium carotovorum WPP14 0.40 HER17_RS21160 DNA-3-methyladenine glycosylase I 0.22 HER17_RS01160 UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Dickeya dianthicola ME23 0.40 DZA65_RS00205 DNA-3-methyladenine glycosylase I 0.22 DZA65_RS21240 UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_0970 3-methyladenine DNA glycosylase 0.25 Echvi_4400 nucleotide sugar dehydrogenase low > 79
Serratia liquefaciens MT49 0.39 IAI46_00120 DNA-3-methyladenine glycosylase I 0.24 IAI46_00605 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Dickeya dianthicola 67-19 0.38 HGI48_RS00200 DNA-3-methyladenine glycosylase I 0.21 HGI48_RS20195 UDP-N-acetyl-D-mannosamine dehydrogenase low > 71
Rahnella sp. WP5 0.37 EX31_RS05880 DNA-3-methyladenine glycosylase I 0.24 EX31_RS15070 UDP-N-acetyl-D-mannosamine dehydrogenase low > 89
Erwinia tracheiphila SCR3 0.37 LU632_RS00080 DNA-3-methyladenine glycosylase I 0.22 LU632_RS24235 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS20945 DNA-3-methyladenine glycosylase I 0.22 ABZR87_RS16430 nucleotide sugar dehydrogenase low > 80
Shewanella amazonensis SB2B 0.37 Sama_0027 DNA-3-methyladenine glycosylase I (RefSeq) 0.23 Sama_2260 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) low > 62
Ralstonia solanacearum PSI07 0.36 RPSI07_RS02490 DNA-3-methyladenine glycosylase I 0.25 RPSI07_RS04505 UDP-N-acetyl-D-mannosamine dehydrogenase low > 81
Dickeya dadantii 3937 0.36 DDA3937_RS21070 DNA-3-methyladenine glycosylase I 0.23 DDA3937_RS20050 UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Ralstonia solanacearum GMI1000 0.36 RS_RS20310 DNA-3-methyladenine glycosylase I 0.26 RS_RS22025 UDP-N-acetyl-D-mannosamine dehydrogenase low > 80
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS20360 DNA-3-methyladenine glycosylase I 0.25 RALBFv3_RS19095 UDP-N-acetyl-D-mannosamine dehydrogenase — —
Ralstonia solanacearum UW163 0.36 UW163_RS18815 DNA-3-methyladenine glycosylase I 0.25 UW163_RS20035 UDP-N-acetyl-D-mannosamine dehydrogenase — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS09865 DNA-3-methyladenine glycosylase I 0.26 LRK55_RS17610 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB low > 63
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS10225 DNA-3-methyladenine glycosylase I 0.26 LRK54_RS17385 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB low > 59
Pantoea sp. MT58 0.32 IAI47_00145 DNA-3-methyladenine glycosylase I 0.23 IAI47_18505 UDP-N-acetyl-D-mannosamine dehydrogenase low > 76
Pseudomonas sp. S08-1 0.31 OH686_12550 DNA-3-methyladenine glycosylase 0.23 OH686_14390 UDP-N-acetyl-D-mannosamine dehydrogenase low > 80
Castellaniella sp019104865 MT123 0.29 ABCV34_RS06670 DNA-3-methyladenine glycosylase I 0.27 ABCV34_RS09370 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB — —
Pseudomonas sp. RS175 0.29 PFR28_04602 DNA-3-methyladenine glycosylase 1 0.23 PFR28_00917 UDP-N-acetyl-D-mannosamine dehydrogenase low > 88
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_657 DNA-3-methyladenine glycosylase (EC 3.2.2.20) 0.24 PfGW456L13_3996 UDP-glucose dehydrogenase (EC 1.1.1.22) — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_11590 3-methyladenine DNA glycosylase 0.51 AO356_03420 UDP-N-acetyl-D-glucosamine dehydrogenase low > 104
Magnetospirillum magneticum AMB-1 0.28 AMB_RS12955 DNA-3-methyladenine glycosylase I 0.26 AMB_RS00730 nucleotide sugar dehydrogenase — —

Not shown: 39 genomes with orthologs for SMc00923 only; 9 genomes with orthologs for SM_b21051 only