Conservation of cofitness between SMc03781 and SM_b20179 in Sinorhizobium meliloti 1021

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc03781 rRNA large subunit methyltransferase 1.0 SM_b20179 hypothetical protein 0.30 1
Dinoroseobacter shibae DFL-12 0.48 Dshi_0088 protein of unknown function DUF163 (RefSeq) 0.69 Dshi_0484 40-residue YVTN family beta-propeller repeat protein (RefSeq) low > 64
Azospirillum sp. SherDot2 0.43 MPMX19_01940 Ribosomal RNA large subunit methyltransferase H 0.56 MPMX19_02925 Hydrazine synthase subunit beta low > 112
Azospirillum brasilense Sp245 0.42 AZOBR_RS04060 50S rRNA methyltransferase 0.56 AZOBR_RS24555 membrane protein low > 97
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS04710 50S rRNA methyltransferase 0.35 RR42_RS11515 hypothetical protein low > 128
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS24420 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.15 QEN71_RS32660 cytochrome D1 domain-containing protein low > 153
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS03565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.12 RALBFv3_RS15495 hypothetical protein low > 76
Ralstonia solanacearum UW163 0.34 UW163_RS10105 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.12 UW163_RS12955 hypothetical protein — —
Ralstonia solanacearum GMI1000 0.34 RS_RS11015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.13 RS_RS06275 YncE family protein — —
Ralstonia solanacearum PSI07 0.34 RPSI07_RS13660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.13 RPSI07_RS17860 YncE family protein — —
Paraburkholderia graminis OAS925 0.34 ABIE53_001541 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.17 ABIE53_005475 YVTN family beta-propeller protein — —
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS15430 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.17 ABZR87_RS15980 beta-propeller fold lactonase family protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_04517 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.17 H281DRAFT_01337 40-residue YVTN family beta-propeller repeat-containing protein low > 103
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS17780 50S rRNA methyltransferase 0.13 HSERO_RS08125 hypothetical protein low > 78
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_2503 Predicted SPOUT methyltransferase 0.09 Ga0059261_3976 Uncharacterized conserved protein low > 68
Variovorax sp. OAS795 0.31 ABID97_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.34 ABID97_RS12815 PQQ-dependent catabolism-associated beta-propeller protein low > 91
Acidovorax sp. GW101-3H11 0.29 Ac3H11_2418 LSU m3Psi1915 methyltransferase RlmH 0.14 Ac3H11_4424 Surface antigen low > 79
Pseudomonas simiae WCS417 0.28 PS417_24730 50S rRNA methyltransferase 0.55 PS417_17485 membrane protein — —
Pseudomonas fluorescens SBW25 0.28 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.12 PFLU_RS09360 beta-propeller fold lactonase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.12 PFLU_RS09360 beta-propeller fold lactonase family protein low > 109
Pseudomonas stutzeri RCH2 0.28 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH 0.55 Psest_2042 PQQ-dependent catabolism-associated beta-propeller protein low > 67
Pseudomonas sp. RS175 0.28 PFR28_03869 Ribosomal RNA large subunit methyltransferase H 0.55 PFR28_01807 Hydrazine synthase subunit beta low > 88
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_4366 Protein of unknown function DUF163 0.12 Psyr_1477 conserved domain protein — —
Pseudomonas putida KT2440 0.27 PP_4808 23S rRNA m3psi1915 methyltransferase 0.55 PP_2669 putative Outer membrane protein low > 96
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF4529 LSU m3Psi1915 methyltransferase RlmH 0.32 GFF5420 FIG00443700: hypothetical protein low > 90
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_4366 Protein of unknown function DUF163 0.12 Psyr_1477 conserved domain protein low > 86
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH 0.55 Pf1N1B4_4493 FIG00443700: hypothetical protein — —
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_06480 50S rRNA methyltransferase 0.55 AO353_22365 hypothetical protein low > 101
Alteromonas macleodii MIT1002 0.27 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H 0.46 MIT1002_03282 PQQ-dependent catabolism-associated beta-propeller protein — —
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_15305 50S rRNA methyltransferase 0.55 AO356_28085 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH 0.55 Pf6N2E2_1395 Uncharacterized conserved protein low > 103
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH 0.56 PfGW456L13_3524 FIG00443700: hypothetical protein low > 87
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.1876.1 LSU m3Psi1915 methyltransferase RlmH 0.22 Xcc-8004.872.1 surface antigen gene — —
Marinobacter adhaerens HP15 0.24 HP15_604 conserved hypothetical protein CHP00246 0.53 HP15_3169 40-residue YVTN family beta-propeller repeat protein low > 73

Not shown: 66 genomes with orthologs for SMc03781 only; 0 genomes with orthologs for SM_b20179 only