Conservation of cofitness between RR42_RS03155 and RR42_RS17195 in Cupriavidus basilensis FW507-4G11

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS03155 alpha/beta hydrolase 1.0 RR42_RS17195 transglutaminase 0.33 19
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS12135 alpha/beta hydrolase 0.85 RALBFv3_RS05205 transglutaminase low > 76
Ralstonia solanacearum UW163 0.68 UW163_RS01475 alpha/beta hydrolase 0.85 UW163_RS08420 transglutaminase — —
Ralstonia solanacearum GMI1000 0.68 RS_RS02820 alpha/beta hydrolase 0.84 RS_RS12825 transglutaminase low > 80
Ralstonia solanacearum PSI07 0.66 RPSI07_RS21195 alpha/beta hydrolase 0.85 RPSI07_RS12095 transglutaminase low > 81
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS08030 alpha/beta fold hydrolase 0.84 ABZR87_RS00860 SirB1 family protein low > 80
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS16305 alpha/beta hydrolase 0.57 BPHYT_RS15895 transglutaminase low > 109
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS02390 hydrolase 0.57 QEN71_RS02805 SirB1 family protein low > 153
Variovorax sp. OAS795 0.52 ABID97_RS00345 alpha/beta fold hydrolase 0.50 ABID97_RS08655 tetratricopeptide repeat protein low > 91
Paraburkholderia graminis OAS925 0.51 ABIE53_003436 putative alpha/beta-fold hydrolase 0.57 ABIE53_003350 regulator of sirC expression with transglutaminase-like and TPR domain low > 113
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS03315 alpha/beta hydrolase 0.50 HSERO_RS06985 transglutaminase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04197 hypothetical protein 0.57 H281DRAFT_04115 Regulator of sirC expression, contains transglutaminase-like and TPR domains low > 103
Variovorax sp. SCN45 0.50 GFF3721 Hydrolase, alpha/beta fold family 0.51 GFF3931 Protein sirB1 low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2952 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 0.51 GFF3424 Protein sirB1 low > 90
Acidovorax sp. GW101-3H11 0.46 Ac3H11_4444 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 0.52 Ac3H11_1327 Protein sirB1 low > 79
Shewanella amazonensis SB2B 0.31 Sama_3000 hypothetical protein (RefSeq) 0.14 Sama_2563 hypothetical protein (RefSeq) low > 62
Escherichia coli Nissle 1917 0.31 ECOLIN_RS19205 hydrolase 0.18 ECOLIN_RS07335 invasion regulator SirB1 low > 55
Escherichia coli BW25113 0.31 b3353 yheT predicted hydrolase (NCBI) 0.18 b1214 ychA predicted transcriptional regulator (NCBI) low > 76
Escherichia coli BL21 0.31 ECD_03204 UPF0017 family putative hydrolase 0.18 ECD_01189 transglutaminase-like TPR-repeat protein low > 61
Escherichia coli ECRC102 0.31 NIAGMN_15030 yheT hydrolase 0.18 NIAGMN_27770 sirB1 invasion regulator SirB1 — —
Escherichia coli ECRC101 0.31 MCAODC_07790 yheT hydrolase 0.18 MCAODC_21795 sirB1 invasion regulator SirB1 low > 87
Escherichia coli ECRC99 0.31 KEDOAH_10880 yheT hydrolase 0.18 KEDOAH_25460 sirB1 invasion regulator SirB1 — —
Escherichia coli ECRC100 0.31 OKFHMN_17260 yheT hydrolase 0.18 OKFHMN_28465 sirB1 invasion regulator SirB1 low > 80
Escherichia coli ECOR38 0.31 HEPCGN_16085 yheT hydrolase 0.18 HEPCGN_24930 sirB1 invasion regulator SirB1 low > 87
Escherichia fergusonii Becca 0.31 EFB2_00469 hypothetical protein 0.18 EFB2_02713 hypothetical protein low > 86
Escherichia coli ECRC98 0.31 JDDGAC_20890 yheT hydrolase 0.18 JDDGAC_06110 sirB1 invasion regulator SirB1 low > 86
Escherichia coli ECRC62 0.31 BNILDI_02460 yheT hydrolase 0.18 BNILDI_18750 sirB1 invasion regulator SirB1 0.59 29
Escherichia coli ECOR27 0.31 NOLOHH_09060 yheT hydrolase 0.18 NOLOHH_20595 sirB1 invasion regulator SirB1 low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_00349 hypothetical protein 0.18 OHPLBJKB_02473 hypothetical protein low > 73
Shewanella oneidensis MR-1 0.31 SO0880 conserved hypothetical protein (NCBI ptt file) 0.13 SO3829 conserved hypothetical protein (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF3716 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 0.17 GFF2771 FIG002708: Protein SirB1 low > 78
Shewanella sp. ANA-3 0.30 Shewana3_3398 alpha/beta hydrolase fold (RefSeq) 0.14 Shewana3_0773 hypothetical protein (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_13215 hydrolase 0.18 CSW01_10830 hypothetical protein low > 62
Pseudomonas putida KT2440 0.29 PP_5117 putative hydrolase 0.16 PP_4618 conserved protein of unknown function low > 96
Rahnella sp. WP5 0.29 EX31_RS04515 hydrolase 0.17 EX31_RS07300 tetratricopeptide repeat-containing protein low > 89
Enterobacter sp. TBS_079 0.29 MPMX20_04256 hypothetical protein 0.16 MPMX20_02633 hypothetical protein 0.30 29
Enterobacter asburiae PDN3 0.29 EX28DRAFT_4176 Predicted hydrolase of the alpha/beta-hydrolase fold 0.16 EX28DRAFT_0833 Uncharacterized conserved protein low > 76
Dickeya dadantii 3937 0.29 DDA3937_RS19425 hydrolase 0.18 DDA3937_RS10980 tetratricopeptide repeat-containing protein low > 74
Pantoea sp. MT58 0.28 IAI47_01985 hydrolase 0.18 IAI47_11255 tetratricopeptide repeat-containing protein — —
Pseudomonas sp. S08-1 0.28 OH686_14200 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 0.14 OH686_18730 hypothetical protein low > 80
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_989 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 0.14 PfGW456L13_4959 Protein sirB1 low > 87
Klebsiella michiganensis M5al 0.28 BWI76_RS25965 hydrolase 0.17 BWI76_RS17420 hypothetical protein low > 92
Pectobacterium carotovorum WPP14 0.27 HER17_RS01935 hydrolase 0.17 HER17_RS10495 invasion regulator SirB1 low > 75
Pseudomonas simiae WCS417 0.26 PS417_26830 alpha/beta hydrolase 0.13 PS417_05035 hypothetical protein low > 88
Pseudomonas sp. RS175 0.26 PFR28_04263 hypothetical protein 0.11 PFR28_00224 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_13315 alpha/beta hydrolase 0.13 AO356_16840 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4578 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 0.13 Pf6N2E2_5293 Protein sirB1 low > 103
Serratia liquefaciens MT49 0.26 IAI46_23560 hydrolase 0.17 IAI46_10295 tetratricopeptide repeat-containing protein low > 86
Xanthomonas campestris pv. campestris strain 8004 0.09 Xcc-8004.237.1 FIG01211085: hypothetical protein 0.29 Xcc-8004.1134.1 Protein sirB1 low > 74

Not shown: 24 genomes with orthologs for RR42_RS03155 only; 5 genomes with orthologs for RR42_RS17195 only