Conservation of cofitness between RR42_RS11260 and RR42_RS17010 in Cupriavidus basilensis FW507-4G11

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) 1.0 RR42_RS17010 L-aspartate oxidase 0.34 16
Ralstonia sp. UNC404CL21Col 0.88 ABZR87_RS14590 methylisocitrate lyase 0.83 ABZR87_RS00345 L-aspartate oxidase low > 80
Ralstonia solanacearum IBSBF1503 0.87 RALBFv3_RS02670 methylisocitrate lyase 0.83 RALBFv3_RS04725 L-aspartate oxidase low > 76
Ralstonia solanacearum UW163 0.87 UW163_RS11055 methylisocitrate lyase 0.83 UW163_RS08945 L-aspartate oxidase — —
Ralstonia solanacearum PSI07 0.87 RPSI07_RS14645 methylisocitrate lyase 0.83 RPSI07_RS12660 L-aspartate oxidase low > 81
Ralstonia solanacearum GMI1000 0.86 RS_RS10050 methylisocitrate lyase 0.83 RS_RS12285 L-aspartate oxidase low > 80
Herbaspirillum seropedicae SmR1 0.84 HSERO_RS15660 2-methylisocitrate lyase 0.74 HSERO_RS11085 L-aspartate oxidase — —
Pseudomonas stutzeri RCH2 0.81 Psest_2321 methylisocitrate lyase 0.65 Psest_3101 L-aspartate oxidase low > 67
Pseudomonas sp. RS175 0.81 PFR28_02928 2-methylisocitrate lyase 0.65 PFR28_00689 L-aspartate oxidase low > 88
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.63 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) low > 103
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_20865 2-methylisocitrate lyase 0.64 AO356_04580 L-aspartate oxidase low > 104
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_00900 2-methylisocitrate lyase 0.65 AO353_17620 L-aspartate oxidase low > 101
Pseudomonas putida KT2440 0.81 PP_2334 2-methylisocitrate lyase 0.65 PP_1426 L-aspartate oxidase low > 96
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) 0.64 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) low > 87
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) 0.64 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) low > 87
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS17555 methylisocitrate lyase 0.80 QEN71_RS03070 L-aspartate oxidase low > 153
Pseudomonas simiae WCS417 0.80 PS417_21080 2-methylisocitrate lyase 0.64 PS417_07115 L-aspartate oxidase — —
Pseudomonas fluorescens SBW25 0.80 PFLU_RS22690 methylisocitrate lyase 0.64 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS22690 methylisocitrate lyase 0.64 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_2085 methylisocitrate lyase 0.65 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_2085 methylisocitrate lyase 0.65 Psyr_3959 L-aspartate oxidase low > 86
Castellaniella sp019104865 MT123 0.77 ABCV34_RS01670 methylisocitrate lyase 0.66 ABCV34_RS03690 L-aspartate oxidase low > 48
Escherichia coli ECOR38 0.76 HEPCGN_07485 prpB methylisocitrate lyase 0.59 HEPCGN_20515 nadB L-aspartate oxidase low > 85
Escherichia coli Nissle 1917 0.75 ECOLIN_RS02150 methylisocitrate lyase 0.59 ECOLIN_RS14570 L-aspartate oxidase low > 52
Escherichia coli BL21 0.75 ECD_00286 2-methylisocitrate lyase 0.59 ECD_02468 quinolinate synthase, L-aspartate oxidase (B protein) subunit low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03339 2-methylisocitrate lyase 0.59 OHPLBJKB_01133 L-aspartate oxidase low > 73
Escherichia coli BW25113 0.75 b0331 prpB 2-methylisocitrate lyase (NCBI) 0.60 b2574 nadB L-aspartate oxidase (NCBI) low > 76
Escherichia coli ECOR27 0.75 NOLOHH_01775 prpB methylisocitrate lyase 0.60 NOLOHH_13045 nadB L-aspartate oxidase low > 57
Escherichia coli ECRC62 0.75 BNILDI_23190 prpB methylisocitrate lyase 0.60 BNILDI_11845 nadB L-aspartate oxidase — —
Escherichia fergusonii Becca 0.75 EFB2_03706 2-methylisocitrate lyase 0.59 EFB2_01322 L-aspartate oxidase low > 86
Escherichia coli ECRC99 0.75 KEDOAH_19065 prpB methylisocitrate lyase 0.59 KEDOAH_06850 nadB L-aspartate oxidase — —
Escherichia coli ECRC98 0.75 JDDGAC_12555 prpB methylisocitrate lyase 0.59 JDDGAC_25035 nadB L-aspartate oxidase — —
Escherichia coli ECRC102 0.75 NIAGMN_06955 prpB methylisocitrate lyase 0.59 NIAGMN_19140 nadB L-aspartate oxidase — —
Escherichia coli ECRC101 0.75 MCAODC_28130 prpB methylisocitrate lyase 0.59 MCAODC_11900 nadB L-aspartate oxidase — —
Escherichia coli ECRC101 0.75 OKFHMN_08900 prpB methylisocitrate lyase 0.59 OKFHMN_21370 nadB L-aspartate oxidase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF4263 Methylisocitrate lyase (EC 4.1.3.30) 0.60 GFF2106 L-aspartate oxidase (EC 1.4.3.16) low > 78
Pseudomonas sp. S08-1 0.73 OH686_01690 methylisocitrate lyase 0.64 OH686_20040 L-aspartate oxidase low > 80
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_1343 methylisocitrate lyase 0.63 B158DRAFT_2179 L-aspartate oxidase (EC 1.4.3.16) low > 40
Shewanella loihica PV-4 0.66 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) 0.60 Shew_1047 L-aspartate oxidase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_06735 methylisocitrate lyase 0.61 CSW01_12495 L-aspartate oxidase low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_03129 Methylisocitrate lyase 0.58 MIT1002_02720 L-aspartate oxidase — —
Marinobacter adhaerens HP15 0.64 HP15_1932 methylisocitrate lyase 2 0.63 HP15_774 L-aspartate oxidase — —
Acinetobacter radioresistens SK82 0.63 MPMX26_01289 2-methylisocitrate lyase 0.59 MPMX26_02162 L-aspartate oxidase — —
Shewanella oneidensis MR-1 0.61 SO0345 prpB methylisocitrate lyase (NCBI ptt file) 0.61 SO1341 nadB L-aspartate oxidase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.61 Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) 0.62 Sama_0873 L-aspartate oxidase (RefSeq) — —
Shewanella sp. ANA-3 0.60 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) 0.61 Shewana3_3033 L-aspartate oxidase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.36 TX73_012370 methylisocitrate lyase 0.28 TX73_005420 L-aspartate oxidase — —

Not shown: 7 genomes with orthologs for RR42_RS11260 only; 38 genomes with orthologs for RR42_RS17010 only