Conservation of cofitness between RR42_RS03280 and RR42_RS15445 in Cupriavidus basilensis FW507-4G11

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS03280 LysR family transcriptional regulator 1.0 RR42_RS15445 7-cyano-7-deazaguanine synthase 0.47 18
Sinorhizobium meliloti 1021 0.62 SMa1782 LysR family transcriptional regulator 0.29 SM_b20940 hypothetical protein low > 103
Shewanella sp. ANA-3 0.39 Shewana3_4390 LysR family transcriptional regulator (RefSeq) 0.26 Shewana3_2164 queuosine biosynthesis protein QueC (RefSeq) low > 73
Castellaniella sp019104865 MT123 0.32 ABCV34_RS09070 LysR family transcriptional regulator 0.19 ABCV34_RS10950 7-cyano-7-deazaguanine synthase QueC low > 48
Pseudomonas sp. RS175 0.31 PFR28_05088 HTH-type transcriptional regulator YhaJ 0.68 PFR28_03403 7-cyano-7-deazaguanine synthase low > 88
Shewanella loihica PV-4 0.30 Shew_1149 LysR family transcriptional regulator (RefSeq) 0.26 Shew_2062 exsB protein (RefSeq) — —
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_12995 LysR family transcriptional regulator 0.67 AO353_03535 7-cyano-7-deazaguanine synthase low > 101
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_1450 LysR family transcriptional regulator PA4989 0.67 Pf1N1B4_628 Queuosine Biosynthesis QueC ATPase low > 87
Pseudomonas putida KT2440 0.30 PP_4929 Transcriptional regulator, LysR family 0.67 PP_1226 pre-queuosine 0 synthase low > 96
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_190 LysR family transcriptional regulator PA4989 0.67 PfGW456L13_1862 Queuosine Biosynthesis QueC ATPase low > 87
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_08825 LysR family transcriptional regulator 0.69 AO356_18070 7-cyano-7-deazaguanine synthase low > 104
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU0309 transcriptional regulator, LysR family (TIGR) 0.25 DVU2659 exsB protein (TIGR) low > 55
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_3647 LysR family transcriptional regulator PA4989 0.69 Pf6N2E2_5546 Queuosine Biosynthesis QueC ATPase low > 103
Pseudomonas fluorescens SBW25 0.27 PFLU_RS02415 LysR family transcriptional regulator 0.68 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS02415 LysR family transcriptional regulator 0.68 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC low > 109
Pseudomonas simiae WCS417 0.27 PS417_02340 LysR family transcriptional regulator 0.68 PS417_22400 7-cyano-7-deazaguanine synthase low > 88
Klebsiella michiganensis M5al 0.27 BWI76_RS23450 LysR family transcriptional regulator 0.28 BWI76_RS06560 7-cyano-7-deazaguanine synthase QueC low > 92
Variovorax sp. SCN45 0.25 GFF595 Transcriptional regulator, LysR family 0.21 GFF5214 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) low > 127
Rahnella sp. WP5 0.25 EX31_RS20055 LysR family transcriptional regulator 0.28 EX31_RS22280 7-cyano-7-deazaguanine synthase QueC low > 89
Ralstonia solanacearum UW163 0.25 UW163_RS17995 LysR family transcriptional regulator 0.90 UW163_RS00625 7-cyano-7-deazaguanine synthase QueC — —
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS16640 LysR family transcriptional regulator 0.90 RALBFv3_RS12940 7-cyano-7-deazaguanine synthase QueC low > 76
Enterobacter sp. TBS_079 0.25 MPMX20_03720 HTH-type transcriptional regulator HdfR 0.28 MPMX20_01035 7-cyano-7-deazaguanine synthase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF1331 LysR-family transcriptional regulator STM3020 0.28 GFF4360 Queuosine Biosynthesis QueC ATPase low > 78
Pantoea sp. MT58 0.24 IAI47_14415 LysR family transcriptional regulator 0.28 IAI47_14620 7-cyano-7-deazaguanine synthase QueC low > 76
Enterobacter asburiae PDN3 0.24 EX28DRAFT_2924 Transcriptional regulator 0.28 EX28DRAFT_2526 queuosine biosynthesis protein QueC low > 76
Pectobacterium carotovorum WPP14 0.24 HER17_RS17115 LysR family transcriptional regulator 0.27 HER17_RS15815 7-cyano-7-deazaguanine synthase QueC low > 75
Ralstonia solanacearum GMI1000 0.24 RS_RS24420 LysR family transcriptional regulator 0.90 RS_RS03715 7-cyano-7-deazaguanine synthase low > 80
Serratia liquefaciens MT49 0.24 IAI46_18235 LysR family transcriptional regulator 0.28 IAI46_05045 7-cyano-7-deazaguanine synthase QueC low > 86
Dickeya dadantii 3937 0.24 DDA3937_RS04545 LysR family transcriptional regulator 0.27 DDA3937_RS05670 7-cyano-7-deazaguanine synthase QueC low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_3357 transcriptional regulator, LysR family 0.67 Psyr_1419 preQ(0) biosynthesis protein QueC low > 86
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_3357 transcriptional regulator, LysR family 0.67 Psyr_1419 preQ(0) biosynthesis protein QueC low > 86
Dickeya dianthicola ME23 0.23 DZA65_RS04425 LysR family transcriptional regulator 0.28 DZA65_RS06040 7-cyano-7-deazaguanine synthase QueC low > 75
Dickeya dianthicola 67-19 0.23 HGI48_RS04505 LysR family transcriptional regulator 0.28 HGI48_RS05715 7-cyano-7-deazaguanine synthase QueC low > 71
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS17685 LysR family transcriptional regulator 0.92 ABZR87_RS09000 7-cyano-7-deazaguanine synthase QueC low > 80
Acinetobacter radioresistens SK82 0.21 MPMX26_01752 hypothetical protein 0.57 MPMX26_02175 7-cyano-7-deazaguanine synthase low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF2844 LysR family transcriptional regulator PA2758 0.16 GFF1402 Queuosine Biosynthesis QueC ATPase low > 90
Alteromonas macleodii MIT1002 0.17 MIT1002_02374 HTH-type transcriptional activator AllS 0.33 MIT1002_01263 7-cyano-7-deazaguanine synthase low > 70
Acidovorax sp. GW101-3H11 0.16 Ac3H11_3277 LysR family transcriptional regulator PA2758 0.21 Ac3H11_4838 Queuosine Biosynthesis QueC ATPase low > 79
Shewanella oneidensis MR-1 0.15 SO0989 transcriptional regulator, LysR family (NCBI ptt file) 0.25 SO2503 exsB exsB protein (NCBI ptt file) low > 76

Not shown: 1 genomes with orthologs for RR42_RS03280 only; 55 genomes with orthologs for RR42_RS15445 only