Conservation of cofitness between RR42_RS13190 and RR42_RS06285 in Cupriavidus basilensis FW507-4G11

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD 1.0 RR42_RS06285 DNA mismatch repair protein MutS 0.50 17
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS15230 hypothetical protein 0.70 RALBFv3_RS14920 DNA mismatch repair protein MutS low > 76
Ralstonia solanacearum UW163 0.60 UW163_RS12695 hypothetical protein 0.70 UW163_RS12390 DNA mismatch repair protein MutS — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS18145 LysM peptidoglycan-binding domain-containing protein 0.71 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Ralstonia solanacearum GMI1000 0.57 RS_RS06040 LysM peptidoglycan-binding domain-containing protein 0.70 RS_RS05735 DNA mismatch repair protein MutS low > 80
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS10870 peptidoglycan DD-metalloendopeptidase family protein 0.71 ABZR87_RS10580 DNA mismatch repair protein MutS low > 80
Paraburkholderia graminis OAS925 0.48 ABIE53_002056 lipoprotein NlpD 0.64 ABIE53_002719 DNA mismatch repair protein MutS low > 113
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS22245 peptidoglycan DD-metalloendopeptidase family protein 0.63 QEN71_RS06085 DNA mismatch repair protein MutS — —
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS09110 peptidase M23 0.64 BPHYT_RS12475 DNA mismatch repair protein MutS — —
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00843 lipoprotein NlpD 0.65 H281DRAFT_00537 DNA mismatch repair protein MutS low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF3881 Lipoprotein NlpD 0.49 GFF3599 DNA mismatch repair protein MutS low > 90
Variovorax sp. SCN45 0.42 GFF2843 Murein hydrolase activator NlpD 0.50 GFF6634 DNA mismatch repair protein MutS low > 127
Acidovorax sp. GW101-3H11 0.42 Ac3H11_1786 Lipoprotein NlpD 0.52 Ac3H11_3641 DNA mismatch repair protein MutS — —
Dechlorosoma suillum PS 0.41 Dsui_1970 metalloendopeptidase-like membrane protein 0.58 Dsui_2244 DNA mismatch repair protein MutS low > 51
Variovorax sp. OAS795 0.40 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein 0.50 ABID97_RS20815 DNA mismatch repair protein MutS low > 91
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS14835 peptidase M23 0.61 HSERO_RS16360 DNA mismatch repair protein MutS low > 78
Alteromonas macleodii MIT1002 0.33 MIT1002_00626 Murein hydrolase activator NlpD precursor 0.49 MIT1002_00953 DNA mismatch repair protein MutS low > 70
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_16610 peptigoglycan-binding protein LysM 0.48 AO353_16625 DNA mismatch repair protein MutS — —
Pseudomonas putida KT2440 0.33 PP_1622 metallopeptidase, M23B subfamily 0.48 PP_1626 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein 0.49 PFLU_RS05765 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens SBW25 0.32 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein 0.49 PFLU_RS05765 DNA mismatch repair protein MutS — —
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_1373 Peptidoglycan-binding LysM:Peptidase M23B 0.48 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_1373 Peptidoglycan-binding LysM:Peptidase M23B 0.48 Psyr_1376 DNA mismatch repair protein MutS — —
Shewanella loihica PV-4 0.31 Shew_1212 peptidase M23B (RefSeq) 0.48 Shew_1214 DNA mismatch repair protein (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_05890 peptigoglycan-binding protein LysM 0.49 AO356_05875 DNA mismatch repair protein MutS — —
Pseudomonas sp. S08-1 0.31 OH686_18180 Murein hydrolase activator NlpD 0.48 OH686_18195 DNA mismatch repair protein MutS 0.62 29
Pseudomonas stutzeri RCH2 0.31 Psest_2807 Membrane proteins related to metalloendopeptidases 0.49 Psest_2875 DNA mismatch repair protein MutS — —
Pseudomonas simiae WCS417 0.31 PS417_06360 peptigoglycan-binding protein LysM 0.49 PS417_05680 DNA mismatch repair protein MutS — —
Pseudomonas sp. RS175 0.31 PFR28_00426 hypothetical protein 0.48 PFR28_00429 DNA mismatch repair protein MutS — —
Kangiella aquimarina DSM 16071 0.29 B158DRAFT_2299 Membrane proteins related to metalloendopeptidases 0.45 B158DRAFT_1529 DNA mismatch repair protein MutS low > 40
Shewanella oneidensis MR-1 0.29 SO3433 nlpD lipoprotein NlpD (NCBI ptt file) 0.47 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_02830 murein hydrolase activator NlpD 0.48 CSW01_02840 DNA mismatch repair protein MutS low > 62
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.3127.1 Lipoprotein NlpD 0.47 Xcc-8004.3760.1 DNA mismatch repair protein MutS — —
Lysobacter sp. OAE881 0.27 ABIE51_RS06500 peptidoglycan DD-metalloendopeptidase family protein 0.49 ABIE51_RS07785 DNA mismatch repair protein MutS low > 62
Castellaniella sp019104865 MT123 0.27 ABCV34_RS03040 peptidoglycan DD-metalloendopeptidase family protein 0.49 ABCV34_RS00270 DNA mismatch repair protein MutS — —

Not shown: 0 genomes with orthologs for RR42_RS13190 only; 65 genomes with orthologs for RR42_RS06285 only