Conservation of cofitness between RR42_RS15875 and RR42_RS02575 in Cupriavidus basilensis FW507-4G11

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS15875 hypothetical protein 1.0 RR42_RS02575 ABC transporter 0.40 12
Ralstonia solanacearum UW163 0.89 UW163_RS00955 DUF179 domain-containing protein 0.84 UW163_RS02030 amino acid ABC transporter substrate-binding protein
Ralstonia solanacearum IBSBF1503 0.89 RALBFv3_RS12610 DUF179 domain-containing protein 0.84 RALBFv3_RS11555 amino acid ABC transporter substrate-binding protein low > 76
Ralstonia solanacearum PSI07 0.88 RPSI07_RS20650 YqgE/AlgH family protein 0.85 RPSI07_RS21655 amino acid ABC transporter substrate-binding protein low > 81
Ralstonia solanacearum GMI1000 0.87 RS_RS03395 YqgE/AlgH family protein 0.85 RS_RS02385 amino acid ABC transporter substrate-binding protein
Ralstonia sp. UNC404CL21Col 0.85 ABZR87_RS08610 YqgE/AlgH family protein 0.80 ABZR87_RS07520 glutamate/aspartate ABC transporter substrate-binding protein low > 80
Paraburkholderia graminis OAS925 0.79 ABIE53_001128 putative transcriptional regulator 0.65 ABIE53_003510 glutamate/aspartate transport system substrate-binding protein low > 113
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS04220 hypothetical protein 0.66 BPHYT_RS16700 ABC transporter low > 109
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_04814 putative transcriptional regulator 0.65 H281DRAFT_04270 L-glutamate-binding protein /L-aspartate-binding protein low > 103
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS25795 YqgE/AlgH family protein 0.65 QEN71_RS26885 glutamate/aspartate ABC transporter substrate-binding protein low > 153
Variovorax sp. SCN45 0.62 GFF2157 UPF0301 protein YqgE 0.53 GFF4088 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF648 UPF0301 protein YqgE 0.39 GFF519 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) low > 90
Dechlorosoma suillum PS 0.60 Dsui_0593 putative transcriptional regulator 0.66 Dsui_0635 periplasmic component of amino acid ABC-type transporter/signal transduction system low > 51
Castellaniella sp019104865 MT123 0.55 ABCV34_RS10730 YqgE/AlgH family protein 0.44 ABCV34_RS14430 amino acid ABC transporter substrate-binding protein low > 48
Pseudomonas sp. S08-1 0.48 OH686_10925 UPF0301 protein YqgE 0.60 OH686_13350 Glutamate/aspartate ABC transporter, substrate-binding protein GltI low > 80
Pseudomonas putida KT2440 0.48 PP_4995 putative protein possibly involved in the control of exopolysaccharide production 0.57 PP_1071 glutamate / aspartate ABC transporter - periplasmic binding protein low > 96
Pseudomonas fluorescens SBW25 0.47 PFLU_RS28330 YqgE/AlgH family protein 0.57 PFLU_RS05645 glutamate/aspartate ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS28330 YqgE/AlgH family protein 0.57 PFLU_RS05645 glutamate/aspartate ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2350 UPF0301 protein YqgE 0.61 Pf1N1B4_771 ABC transporter for L-asparagine and L-glutamate, periplasmic substrate-binding component (from data) low > 87
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_08120 hypothetical protein 0.60 AO353_16290 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, periplasmic substrate-binding component (from data) low > 101
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_1019 UPF0301 protein YqgE 0.57 PfGW456L13_4770 ABC transporter for L-Asparagine and possibly other L-amino acids, periplasmic substrate-binding component (from data) low > 87
Pseudomonas simiae WCS417 0.46 PS417_26685 hypothetical protein 0.57 PS417_05560 ABC transporter low > 88
Pectobacterium carotovorum WPP14 0.45 HER17_RS02630 YqgE/AlgH family protein 0.62 HER17_RS15190 amino acid ABC transporter substrate-binding protein low > 75
Pseudomonas sp. RS175 0.45 PFR28_04234 hypothetical protein 0.59 PFR28_03371 Glutamate/aspartate import solute-binding protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0485 Protein of unknown function DUF179 0.59 Psyr_3908 L-aspartate-binding protein / L-glutamate-binding protein low > 86
Dickeya dianthicola ME23 0.45 DZA65_RS19635 YqgE/AlgH family protein 0.61 DZA65_RS06615 glutamate/aspartate ABC transporter substrate-binding protein low > 75
Dickeya dianthicola 67-19 0.45 HGI48_RS18500 YqgE/AlgH family protein 0.61 HGI48_RS06270 glutamate/aspartate ABC transporter substrate-binding protein low > 71
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_13465 hypothetical protein 0.58 AO356_18230 ABC transporter low > 104
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0485 Protein of unknown function DUF179 0.59 Psyr_3908 L-aspartate-binding protein / L-glutamate-binding protein low > 86
Dickeya dadantii 3937 0.45 DDA3937_RS18565 YqgE/AlgH family protein 0.61 DDA3937_RS06225 glutamate/aspartate ABC transporter substrate-binding protein
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4609 UPF0301 protein YqgE 0.58 Pf6N2E2_5570 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) low > 103
Serratia liquefaciens MT49 0.44 IAI46_21395 YqgE/AlgH family protein 0.62 IAI46_05995 amino acid ABC transporter substrate-binding protein low > 86
Rahnella sp. WP5 0.44 EX31_RS02670 YqgE/AlgH family protein 0.62 EX31_RS23175 amino acid ABC transporter substrate-binding protein low > 89
Klebsiella michiganensis M5al 0.43 BWI76_RS24080 DUF179 domain-containing protein 0.59 BWI76_RS08110 glutamate/aspartate ABC transporter substrate-binding protein low > 92
Pantoea sp. MT58 0.43 IAI47_03610 YqgE/AlgH family protein 0.62 IAI47_13970 amino acid ABC transporter substrate-binding protein low > 76
Escherichia coli Nissle 1917 0.43 ECOLIN_RS16400 YqgE/AlgH family protein 0.60 ECOLIN_RS03525 glutamate/aspartate ABC transporter substrate-binding protein GltI
Escherichia coli ECOR38 0.43 HEPCGN_18575 yqgE YqgE/AlgH family protein 0.60 HEPCGN_00980 gltI glutamate/aspartate ABC transporter substrate-binding protein GltI low > 87
Escherichia coli ECRC99 0.43 KEDOAH_08870 algH YqgE/AlgH family protein 0.60 KEDOAH_20720 gltI glutamate/aspartate ABC transporter substrate-binding protein GltI
Escherichia coli BL21 0.43 ECD_02778 uncharacterized protein 0.60 ECD_00623 glutamate/aspartate periplasmic binding protein low > 61
Escherichia coli BW25113 0.43 b2948 yqgE orf, hypothetical protein (VIMSS) 0.59 b0655 gltI glutamate and aspartate transporter subunit (NCBI) low > 76
Escherichia coli ECRC102 0.42 NIAGMN_17035 yqgE YqgE/AlgH family protein 0.60 NIAGMN_05305 gltI glutamate/aspartate ABC transporter substrate-binding protein GltI
Escherichia coli ECRC62 0.42 BNILDI_09720 yqgE YqgE/AlgH family protein 0.60 BNILDI_21645 gltI glutamate/aspartate ABC transporter substrate-binding protein GltI low > 75
Escherichia coli ECRC101 0.42 MCAODC_09790 yqgE YqgE/AlgH family protein 0.60 MCAODC_26465 gltI glutamate/aspartate ABC transporter substrate-binding protein GltI low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF3050 UPF0301 protein YqgE 0.61 GFF4573 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) low > 78
Escherichia coli ECOR27 0.42 NOLOHH_11140 yqgE YqgE/AlgH family protein 0.60 NOLOHH_23635 gltI glutamate/aspartate ABC transporter substrate-binding protein GltI low > 75
Escherichia fergusonii Becca 0.42 EFB2_00954 hypothetical protein 0.60 EFB2_03444 Glutamate/aspartate import solute-binding protein low > 86
Escherichia coli ECRC98 0.42 JDDGAC_22900 yqgE YqgE/AlgH family protein 0.60 JDDGAC_10895 gltI glutamate/aspartate ABC transporter substrate-binding protein GltI low > 86
Escherichia coli ECRC100 0.42 OKFHMN_19270 yqgE YqgE/AlgH family protein 0.60 OKFHMN_07250 gltI glutamate/aspartate ABC transporter substrate-binding protein GltI low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_00770 hypothetical protein 0.60 OHPLBJKB_03058 Glutamate/aspartate import solute-binding protein low > 73
Rhodospirillum rubrum S1H 0.42 Rru_A3059 Protein of unknown function DUF179 (NCBI) 0.44 Rru_A2087 extracellular solute-binding protein, family 3 (NCBI) low > 58
Enterobacter sp. TBS_079 0.41 MPMX20_03806 hypothetical protein 0.61 MPMX20_01306 Glutamate/aspartate import solute-binding protein low > 85
Enterobacter asburiae PDN3 0.41 EX28DRAFT_2986 Putative transcriptional regulator 0.62 EX28DRAFT_2315 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 76
Acinetobacter radioresistens SK82 0.40 MPMX26_00238 hypothetical protein 0.52 MPMX26_00678 Glutamate/aspartate import solute-binding protein low > 36

Not shown: 44 genomes with orthologs for RR42_RS15875 only; 0 genomes with orthologs for RR42_RS02575 only