Conservation of cofitness between QEN71_RS26240 and QEN71_RS36075 in Paraburkholderia sabiae LMG 24235

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS26240 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 1.0 QEN71_RS36075 S-methyl-5-thioribose-1-phosphate isomerase 0.38 13
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_04724 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase 0.69 H281DRAFT_02707 methylthioribose-1-phosphate isomerase (EC 5.3.1.23) low > 103
Klebsiella michiganensis M5al 0.74 BWI76_RS15475 NAD(P)-dependent oxidoreductase 0.34 BWI76_RS07825 S-methyl-5-thioribose-1-phosphate isomerase low > 92
Enterobacter asburiae PDN3 0.74 EX28DRAFT_1450 Short-chain alcohol dehydrogenase of unknown specificity 0.34 EX28DRAFT_2358 S-methyl-5-thioribose-1-phosphate isomerase low > 76
Escherichia coli Nissle 1917 0.73 ECOLIN_RS08810 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.33 ECOLIN_RS27000 S-methyl-5-thioribose-1-phosphate isomerase — —
Enterobacter sp. TBS_079 0.73 MPMX20_02099 NADP-dependent 3-hydroxy acid dehydrogenase YdfG 0.34 MPMX20_01264 Methylthioribose-1-phosphate isomerase low > 85
Rahnella sp. WP5 0.72 EX31_RS07075 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.35 EX31_RS21045 S-methyl-5-thioribose-1-phosphate isomerase low > 89
Pectobacterium carotovorum WPP14 0.70 HER17_RS10705 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.33 HER17_RS04625 S-methyl-5-thioribose-1-phosphate isomerase low > 75
Serratia liquefaciens MT49 0.70 IAI46_11720 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.35 IAI46_04320 S-methyl-5-thioribose-1-phosphate isomerase low > 86
Pantoea sp. MT58 0.70 IAI47_09805 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.35 IAI47_15205 S-methyl-5-thioribose-1-phosphate isomerase low > 76
Dickeya dianthicola ME23 0.67 DZA65_RS11160 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.34 DZA65_RS17765 S-methyl-5-thioribose-1-phosphate isomerase low > 75
Dickeya dianthicola 67-19 0.67 HGI48_RS10690 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.33 HGI48_RS16675 S-methyl-5-thioribose-1-phosphate isomerase low > 71
Erwinia tracheiphila SCR3 0.67 LU632_RS11720 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.33 LU632_RS01115 mtnA S-methyl-5-thioribose-1-phosphate isomerase low > 74
Dickeya dadantii 3937 0.65 DDA3937_RS10695 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.34 DDA3937_RS16605 S-methyl-5-thioribose-1-phosphate isomerase low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.63 DVU1784 oxidoreductase, short-chain dehydrogenase/reductase family (TIGR) 0.38 DVU0084 translation initiation factor, aIF-2BI family, putative (TIGR) low > 55
Rhodospirillum rubrum S1H 0.59 Rru_A2127 Serine 3-dehydrogenase (NCBI) 0.30 Rru_A0360 Initiation factor 2B alpha/beta/delta (NCBI) low > 58
Pseudomonas putida KT2440 0.55 PP_0488 putative NADP-dependent dehydrogenase HI_1430 0.28 PP_1766 methylthioribose-1-phosphate isomerase low > 96
Desulfovibrio vulgaris Miyazaki F 0.55 DvMF_0398 short-chain dehydrogenase/reductase SDR (RefSeq) 0.37 DvMF_2235 translation initiation factor, aIF-2BI family (RefSeq) low > 51
Magnetospirillum magneticum AMB-1 0.54 AMB_RS12070 NADP-dependent 3-hydroxy acid dehydrogenase 0.30 AMB_RS20850 S-methyl-5-thioribose-1-phosphate isomerase low > 64
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_0602 Short-chain dehydrogenase/reductase SDR 0.35 Psyr_3648 methylthioribose-1-phosphate isomerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_0602 Short-chain dehydrogenase/reductase SDR 0.35 Psyr_3648 methylthioribose-1-phosphate isomerase low > 86
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_08475 hypothetical protein 0.31 AO356_03480 methylthioribose-1-phosphate isomerase low > 104
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_3575 Oxidoreductase, short chain dehydrogenase/reductase family 0.31 Pf6N2E2_2523 Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) low > 103
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.4903.1 Oxidoreductase 0.36 Xcc-8004.3303.1 Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) low > 74
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_117 Oxidoreductase, short chain dehydrogenase/reductase family 0.34 PfGW456L13_2173 Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) low > 87
Pseudomonas sp. RS175 0.52 PFR28_05158 Sulfoacetaldehyde reductase 0.31 PFR28_00903 Methylthioribose-1-phosphate isomerase low > 88
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_1376 Oxidoreductase, short chain dehydrogenase/reductase family 0.33 Pf1N1B4_354 Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) — —
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_13380 hypothetical protein 0.34 AO353_02085 methylthioribose-1-phosphate isomerase low > 101
Pseudomonas stutzeri RCH2 0.51 Psest_0101 Short-chain alcohol dehydrogenase of unknown specificity 0.33 Psest_1981 S-methyl-5-thioribose-1-phosphate isomerase low > 67
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS09150 SDR family NAD(P)-dependent oxidoreductase 0.30 LRK54_RS01010 S-methyl-5-thioribose-1-phosphate isomerase low > 59
Rhodanobacter denitrificans MT42 0.50 LRK55_RS08680 SDR family NAD(P)-dependent oxidoreductase 0.30 LRK55_RS00785 S-methyl-5-thioribose-1-phosphate isomerase low > 63
Azospirillum sp. SherDot2 0.50 MPMX19_02817 Serine 3-dehydrogenase 0.28 MPMX19_02375 Methylthioribose-1-phosphate isomerase low > 112
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS02750 SDR family oxidoreductase 0.32 PFLU_RS08080 S-methyl-5-thioribose-1-phosphate isomerase low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS02750 SDR family oxidoreductase 0.32 PFLU_RS08080 S-methyl-5-thioribose-1-phosphate isomerase low > 109
Bosea sp. OAE506 0.50 ABIE41_RS08870 SDR family NAD(P)-dependent oxidoreductase 0.31 ABIE41_RS11215 S-methyl-5-thioribose-1-phosphate isomerase low > 77
Pseudomonas simiae WCS417 0.49 PS417_02680 hypothetical protein 0.31 PS417_08110 methylthioribose-1-phosphate isomerase low > 88
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_15640 NADP-dependent 3-hydroxy acid dehydrogenase 0.31 OKGIIK_05885 mtnA S-methyl-5-thioribose-1-phosphate isomerase low > 52
Sinorhizobium meliloti 1021 0.29 SMa0320 short chain alcohol dehydrogenase-related dehydrogenase 0.35 SM_b20624 methylthioribose-1-phosphate isomerase low > 103
Rhizobium sp. OAE497 0.22 ABIE40_RS03905 SDR family oxidoreductase 0.34 ABIE40_RS25155 S-methyl-5-thioribose-1-phosphate isomerase low > 107
Marinobacter adhaerens HP15 0.22 HP15_879 short-chain dehydrogenase/reductase SDR 0.33 HP15_1229 translation initiation factor, aIF-2BI family low > 73

Not shown: 41 genomes with orthologs for QEN71_RS26240 only; 13 genomes with orthologs for QEN71_RS36075 only