| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0497 | | LamB/YcsF | 1.0 | Psyr_5088 | | regulatory protein, LuxR:Response regulator receiver | 0.75 | 2 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0497 | | LamB/YcsF | 1.00 | Psyr_5088 | | regulatory protein, LuxR:Response regulator receiver | low | > 86 |
| Agrobacterium fabrum C58 | 0.67 | Atu3910 | | LamB/YcsF family protein | 0.49 | Atu4774 | | two component response regulator | low | > 89 |
| Variovorax sp. SCN45 | 0.66 | GFF5546 | | Lactam utilization protein LamB | 0.36 | GFF965 | | Two-component transcriptional response regulator, LuxR family | — | — |
| Castellaniella sp019104865 MT123 | 0.65 | ABCV34_RS01510 | | 5-oxoprolinase subunit PxpA | 0.39 | ABCV34_RS04170 | | response regulator transcription factor | — | — |
| Rhodopseudomonas palustris CGA009 | 0.46 | TX73_013895 | | LamB/YcsF family protein | 0.48 | TX73_010870 | | response regulator | low | > 86 |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS01255 | | 5-oxoprolinase subunit PxpA | 0.44 | ABID97_RS26300 | | response regulator | — | — |
| Burkholderia phytofirmans PsJN | 0.44 | BPHYT_RS18635 | | LamB/YcsF family protein | 0.50 | BPHYT_RS11910 | | chemotaxis protein CheY | — | — |
| Paraburkholderia graminis OAS925 | 0.44 | ABIE53_000049 | | UPF0271 protein | 0.54 | ABIE53_001505 | | FixJ family two-component response regulator | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS28660 | | 5-oxoprolinase subunit PxpA | 0.53 | QEN71_RS39350 | | response regulator transcription factor | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.44 | H281DRAFT_05811 | | UPF0271 protein | 0.51 | H281DRAFT_03395 | | two component transcriptional regulator, LuxR family | low | > 103 |
| Azospirillum brasilense Sp245 | 0.44 | AZOBR_RS14715 | | hypothetical protein | 0.54 | AZOBR_RS17625 | | Nodulation protein W | — | — |
| Azospirillum sp. SherDot2 | 0.43 | MPMX19_04959 | | 5-oxoprolinase subunit A | 0.50 | MPMX19_03583 | | Response regulator protein TodT | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.43 | PfGW456L13_4478 | | Lactam utilization protein LamB | 0.36 | PfGW456L13_3749 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.43 | Pf1N1B4_3366 | | Lactam utilization protein LamB | 0.52 | Pf1N1B4_4408 | | two-component response regulator | low | > 87 |
| Pseudomonas sp. RS175 | 0.42 | PFR28_00728 | | 5-oxoprolinase subunit A 3 | 0.67 | PFR28_02521 | | Response regulator protein TmoT | — | — |
| Dinoroseobacter shibae DFL-12 | 0.42 | Dshi_2026 | | LamB/YcsF family protein (RefSeq) | 0.34 | Dshi_2568 | | two component transcriptional regulator, LuxR family (RefSeq) | low | > 64 |
| Ralstonia solanacearum UW163 | 0.42 | UW163_RS10245 | | LamB/YcsF family protein | 0.36 | UW163_RS14990 | | DNA-binding response regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS03425 | | LamB/YcsF family protein | 0.36 | RALBFv3_RS01680 | | DNA-binding response regulator | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_2708 | | Lactam utilization protein LamB | 0.38 | Pf6N2E2_1724 | | DNA-binding response regulator, LuxR family | — | — |
| Ralstonia solanacearum PSI07 | 0.41 | RPSI07_RS02850 | | hypothetical protein | 0.36 | RPSI07_RS15805 | | DNA-binding response regulator | — | — |
| Ralstonia solanacearum GMI1000 | 0.41 | RS_RS21600 | | hypothetical protein | 0.36 | RS_RS08045 | | DNA-binding response regulator | low | > 80 |
| Marinobacter adhaerens HP15 | 0.41 | HP15_2685 | | UPF0271 protein, LamB/YcsF family | 0.39 | HP15_1053 | | two component transcriptional regulator, LuxR family | low | > 73 |
| Pseudomonas sp. S08-1 | 0.41 | OH686_08750 | | Lactam utilization protein LamB | 0.50 | OH686_18645 | | Two-component transcriptional response regulator, LuxR family | low | > 80 |
| Dickeya dadantii 3937 | 0.41 | DDA3937_RS08225 | | LamB/YcsF family protein | 0.67 | DDA3937_RS07235 | | response regulator transcription factor | low | > 74 |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS15325 | | 5-oxoprolinase subunit PxpA | 0.36 | ABZR87_RS13480 | | response regulator transcription factor | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.40 | RR42_RS00650 | | hypothetical protein | 0.50 | RR42_RS25965 | | LuxR family transcriptional regulator | low | > 128 |
| Serratia liquefaciens MT49 | 0.40 | IAI46_06225 | | 5-oxoprolinase subunit PxpA | 0.29 | IAI46_04860 | | response regulator transcription factor | low | > 86 |
| Shewanella loihica PV-4 | 0.38 | Shew_0006 | | LamB/YcsF family protein (RefSeq) | 0.42 | Shew_3240 | | two component LuxR family transcriptional regulator (RefSeq) | low | > 60 |
| Enterobacter asburiae PDN3 | 0.38 | EX28DRAFT_2274 | | Uncharacterized proteins, homologs of lactam utilization protein B | 0.38 | EX28DRAFT_3507 | | Response regulator | low | > 76 |
| Pantoea sp. MT58 | 0.38 | IAI47_13795 | | 5-oxoprolinase subunit PxpA | 0.40 | IAI47_20275 | | response regulator transcription factor | low | > 76 |
| Shewanella amazonensis SB2B | 0.37 | Sama_0021 | | hypothetical protein (RefSeq) | 0.32 | Sama_3183 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Enterobacter sp. TBS_079 | 0.37 | MPMX20_01347 | | 5-oxoprolinase subunit A | 0.25 | MPMX20_01965 | | Response regulator protein TmoT | low | > 85 |
| Klebsiella michiganensis M5al | 0.36 | BWI76_RS08360 | | LamB/YcsF family protein | 0.28 | BWI76_RS14640 | | DNA-binding response regulator | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.35 | GFF4618 | | Lactam utilization protein LamB | 0.28 | GFF3576 | | Tetrathionate reductase two-component response regulator | low | > 78 |
| Lysobacter sp. OAE881 | 0.32 | ABIE51_RS08130 | | 5-oxoprolinase subunit PxpA | 0.55 | ABIE51_RS11970 | | response regulator transcription factor | low | > 62 |
Not shown: 29 genomes with orthologs for Psyr_0497 only; 16 genomes with orthologs for Psyr_5088 only