Conservation of cofitness between Psyr_2997 and Psyr_4018 in Pseudomonas syringae pv. syringae B728a

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2997 Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region 1.0 Psyr_4018 Formyltetrahydrofolate deformylase 0.44 6
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2997 Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region 1.00 Psyr_4018 Formyltetrahydrofolate deformylase low > 86
Pseudomonas sp. DMC3 0.86 GFF3487 Glycogen operon protein GlgX 0.89 GFF5213 Formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_26000 glycogen debranching protein 0.92 AO356_17895 formyltetrahydrofolate deformylase — —
Pseudomonas sp. RS175 0.86 PFR28_02150 Glycogen operon protein GlgX 0.92 PFR28_03439 Formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_1073 Glycogen debranching enzyme (EC 3.2.1.-) 0.92 Pf6N2E2_5508 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 103
Pseudomonas fluorescens SBW25 0.85 PFLU_RS16435 glycogen debranching protein GlgX 0.92 PFLU_RS24200 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_4682 Glycogen debranching enzyme (EC 3.2.1.-) 0.92 Pf1N1B4_665 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS16435 glycogen debranching protein GlgX 0.92 PFLU_RS24200 formyltetrahydrofolate deformylase — —
Pseudomonas simiae WCS417 0.85 PS417_14505 glycogen debranching protein 0.91 PS417_22565 formyltetrahydrofolate deformylase low > 88
Pseudomonas lactucae CFBP13502 0.85 GEMAOFIL_03190 Glycogen operon protein GlgX 0.92 GEMAOFIL_04667 Formyltetrahydrofolate deformylase low > 96
Pseudomonas orientalis W4I3 0.85 QF045_RS15290 glycogen debranching protein GlgX 0.91 QF045_RS24740 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_3250 Glycogen debranching enzyme (EC 3.2.1.-) 0.91 PfGW456L13_1825 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_23750 glycogen debranching protein 0.92 AO353_03710 formyltetrahydrofolate deformylase low > 101
Pseudomonas sp. SVBP6 0.83 COO64_RS24790 glgX glycogen debranching protein GlgX 0.89 COO64_RS12215 purU formyltetrahydrofolate deformylase — —
Pseudomonas putida KT2440 0.81 PP_4055 Glycogen debranching enzyme 0.89 PP_1367 formyltetrahydrofolate hydrolase low > 96
Pseudomonas sp. BP01 0.81 JOY50_RS06735 glgX glycogen debranching protein GlgX 0.88 JOY50_RS14345 purU formyltetrahydrofolate deformylase — —
Pseudomonas stutzeri RCH2 0.81 Psest_2167 glycogen debranching enzyme GlgX 0.86 Psest_3178 formyltetrahydrofolate deformylase low > 67
Pseudomonas sp. S08-1 0.77 OH686_01305 glycogen debranching enzyme GlgX 0.91 OH686_18295 formyltetrahydrofolate deformylase low > 80
Pseudomonas aeruginosa PUPa3 0.75 DQ20_RS39320 glgX;go_function=glycogen glycogen debranching protein GlgX 0.86 DQ20_RS57375 purU;go_function=formyltetrahydrofolate formyltetrahydrofolate deformylase low > 101
Pseudomonas aeruginosa PA14 0.75 IKLFDK_10570 glycogen debranching protein GlgX 0.86 IKLFDK_02535 formyltetrahydrofolate deformylase — —
Pseudomonas aeruginosa MRSN321 0.74 DY961_RS17060 glgX;go_function=glycogen glycogen debranching protein GlgX 0.86 DY961_RS24925 purU;go_function=formyltetrahydrofolate formyltetrahydrofolate deformylase low > 100
Rahnella sp. WP5 0.66 EX31_RS07170 glycogen debranching protein GlgX 0.40 EX31_RS10115 formyltetrahydrofolate deformylase low > 89
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS10560 glycogen debranching protein GlgX 0.66 QEN71_RS33925 formyltetrahydrofolate deformylase low > 153
Klebsiella michiganensis M5al 0.52 BWI76_RS14140 glycogen debranching enzyme 0.38 BWI76_RS17290 formyltetrahydrofolate deformylase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF2548 Glycogen debranching enzyme (EC 3.2.1.-) 0.39 GFF2756 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 78
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1157 glycogen debranching enzyme GlgX 0.38 EX28DRAFT_0858 formyltetrahydrofolate deformylase low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_02327 Glycogen operon protein GlgX 0.38 MPMX20_02596 Formyltetrahydrofolate deformylase low > 85
Pantoea sp. MT58 0.51 IAI47_10665 glycogen debranching protein GlgX 0.38 IAI47_09010 formyltetrahydrofolate deformylase low > 76
Pantoea agglomerans CFBP13505 P0401 0.51 PagCFBP13505_RS05470 glycogen debranching protein GlgX 0.38 PagCFBP13505_RS02850 formyltetrahydrofolate deformylase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.51 ABZR88_RS11805 glycogen debranching protein GlgX 0.36 ABZR88_RS14140 formyltetrahydrofolate deformylase low > 71
Shewanella sp. ANA-3 0.47 Shewana3_2933 glycogen debranching enzyme GlgX (RefSeq) 0.36 Shewana3_2821 purU formyltetrahydrofolate deformylase (RefSeq) low > 73
Mycobacterium tuberculosis H37Rv 0.46 Rv1564c Probable maltooligosyltrehalose synthase TreX 0.40 Rv2964 Probable formyltetrahydrofolate deformylase PurU (formyl-FH(4) hydrolase) low > 58
Shewanella oneidensis MR-1 0.46 SO1495 glgX glycogen operon protein (NCBI ptt file) 0.36 SO1624 purU formyltetrahydrofolate deformylase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.45 Shew_1169 glycogen debranching enzyme GlgX (RefSeq) 0.34 Shew_2640 purU formyltetrahydrofolate deformylase (RefSeq) low > 60
Serratia liquefaciens MT49 0.38 IAI46_23935 glycogen debranching protein GlgX 0.38 IAI46_14265 formyltetrahydrofolate deformylase low > 87
Klebsiella pneumoniae MKP103 0.37 KDGMDA_07095 glycogen debranching protein GlgX 0.39 KDGMDA_24520 formyltetrahydrofolate deformylase low > 95
Escherichia coli ECOR27 0.37 NOLOHH_08680 glgX glycogen debranching protein GlgX 0.39 NOLOHH_20480 purU formyltetrahydrofolate deformylase low > 76
Escherichia coli BW25113 0.37 b3431 glgX glycogen debranching enzyme (NCBI) 0.38 b1232 purU formyltetrahydrofolate deformylase (NCBI) low > 76
Escherichia coli ECRC99 0.37 KEDOAH_11250 glgX glycogen debranching protein GlgX 0.39 KEDOAH_25565 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECRC98 0.37 JDDGAC_20520 glgX glycogen debranching protein GlgX 0.39 JDDGAC_06005 purU formyltetrahydrofolate deformylase low > 87
Escherichia coli ECRC101 0.37 MCAODC_07420 glgX glycogen debranching protein GlgX 0.39 MCAODC_21690 purU formyltetrahydrofolate deformylase low > 87
Escherichia coli ECRC100 0.37 OKFHMN_16890 glgX glycogen debranching protein GlgX 0.39 OKFHMN_28570 purU formyltetrahydrofolate deformylase low > 79
Escherichia coli ECOR38 0.37 HEPCGN_15705 glgX glycogen debranching protein GlgX 0.39 HEPCGN_25030 purU formyltetrahydrofolate deformylase low > 88
Escherichia coli ECRC102 0.37 NIAGMN_14660 glgX glycogen debranching protein GlgX 0.39 NIAGMN_27665 purU formyltetrahydrofolate deformylase low > 80
Escherichia coli BL21 0.37 ECD_03283 glycogen debranching enzyme 0.39 ECD_01208 formyltetrahydrofolate hydrolase low > 61
Escherichia fergusonii Becca 0.37 EFB2_00388 Glycogen debranching enzyme 0.39 EFB2_02694 Formyltetrahydrofolate deformylase low > 86
Escherichia coli ECRC62 0.37 BNILDI_02835 glgX glycogen debranching protein GlgX 0.38 BNILDI_18635 purU formyltetrahydrofolate deformylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_00270 Glycogen debranching enzyme 0.39 OHPLBJKB_02453 Formyltetrahydrofolate deformylase low > 74
Pectobacterium carotovorum WPP14 0.37 HER17_RS01490 glycogen debranching protein GlgX 0.38 HER17_RS11065 formyltetrahydrofolate deformylase low > 75
Escherichia coli Nissle 1917 0.37 ECOLIN_RS19635 glycogen debranching protein GlgX 0.39 ECOLIN_RS07460 formyltetrahydrofolate deformylase low > 55
Dickeya dadantii 3937 0.36 DDA3937_RS19740 glycogen debranching protein GlgX 0.39 DDA3937_RS10325 formyltetrahydrofolate deformylase 0.44 29
Dickeya dianthicola 67-19 0.36 HGI48_RS19850 glycogen debranching protein GlgX 0.39 HGI48_RS10335 formyltetrahydrofolate deformylase low > 71
Dickeya dianthicola ME23 0.36 DZA65_RS20925 glycogen debranching protein GlgX 0.39 DZA65_RS10810 formyltetrahydrofolate deformylase low > 75
Erwinia amylovora T8 0.36 OLJFJH_04255 glycogen debranching protein GlgX 0.39 OLJFJH_13275 formyltetrahydrofolate deformylase low > 58
Alteromonas macleodii MIT1002 0.35 MIT1002_02398 Glycogen debranching enzyme 0.60 MIT1002_00404 Formyltetrahydrofolate deformylase low > 70
Synechocystis sp000284455 PCC 6803 0.34 SGL_RS07435 glycogen debranching protein GlgX 0.45 SGL_RS13830 formyltetrahydrofolate deformylase low > 52
Shewanella amazonensis SB2B 0.34 Sama_2452 glycogen operon protein (RefSeq) 0.37 Sama_1134 purU formyltetrahydrofolate deformylase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_19235 glycogen debranching enzyme GlgX 0.38 CSW01_09940 formyltetrahydrofolate deformylase low > 62

Not shown: 27 genomes with orthologs for Psyr_2997 only; 17 genomes with orthologs for Psyr_4018 only