Conservation of cofitness between Psyr_3453 and Psyr_3437 in Pseudomonas syringae pv. syringae B728a

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3453 flagellar protein FliJ, putative 1.0 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.84 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3453 flagellar protein FliJ, putative 1.00 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.47 11
Pseudomonas fluorescens SBW25 0.75 PFLU_RS21755 flagella biosynthesis chaperone FliJ 0.94 PFLU_RS21660 RNA polymerase sigma factor FliA 0.97 5
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_18700 flagellar biogenesis protein 0.96 AO353_18785 flagellar biosynthesis sigma factor 0.37 23
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS21755 flagella biosynthesis chaperone FliJ 0.94 PFLU_RS21660 RNA polymerase sigma factor FliA 0.96 4
Pseudomonas simiae WCS417 0.73 PS417_19785 flagellar biogenesis protein 0.94 PS417_19695 flagellar biosynthesis sigma factor 0.94 10
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4349 Flagellar protein FliJ 0.95 PfGW456L13_4331 RNA polymerase sigma factor for flagellar operon — —
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_3608 Flagellar protein FliJ 0.96 Pf1N1B4_3626 RNA polymerase sigma factor for flagellar operon — —
Pseudomonas sp. RS175 0.72 PFR28_00836 Flagellar FliJ protein 0.94 PFR28_00852 RNA polymerase sigma factor FliA 0.91 17
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_03815 flagellar biogenesis protein 0.94 AO356_03730 flagellar biosynthesis sigma factor 0.94 12
Pseudomonas sp. SVBP6 0.71 COO64_RS21260 fliJ flagellar export protein FliJ 0.96 COO64_RS25625 fliA RNA polymerase sigma factor FliA 0.97 7
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_2589 Flagellar protein FliJ 0.94 Pf6N2E2_2573 RNA polymerase sigma factor for flagellar operon 0.82 13
Pseudomonas sp. DMC3 0.70 GFF2453 hypothetical protein 0.95 GFF2472 RNA polymerase sigma factor FliA low > 89
Pseudomonas sp. BP01 0.70 JOY50_RS00665 fliJ flagellar export protein FliJ 0.92 JOY50_RS00585 fliA RNA polymerase sigma factor FliA 0.68 27
Pseudomonas putida KT2440 0.67 PP_4365 Flagellar protein FliJ 0.92 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons 0.88 8
Pseudomonas sp. S08-1 0.64 OH686_02815 flagellar export protein FliJ 0.83 OH686_02730 RNA polymerase sigma factor for flagellar operon 0.94 1
Pseudomonas aeruginosa PA14 0.56 IKLFDK_05085 flagellar protein FliJ 0.80 IKLFDK_06920 flagellar biosynthesis sigma factor FliA 0.74 27
Pseudomonas stutzeri RCH2 0.50 Psest_1723 flagellar export protein FliJ 0.81 Psest_1740 RNA polymerase sigma factor, FliA/WhiG family 0.91 4
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS20190 flagellar export protein FliJ 0.50 ABZR86_RS20265 RNA polymerase sigma factor FliA 0.40 63
Ralstonia solanacearum PSI07 0.23 RPSI07_RS01555 flagellar export protein FliJ 0.43 RPSI07_RS06165 RNA polymerase sigma factor FliA low > 81
Ralstonia solanacearum UW163 0.22 UW163_RS17620 flagellar export protein FliJ 0.44 UW163_RS21665 RNA polymerase sigma factor FliA — —
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS21570 flagellar export protein FliJ 0.44 RALBFv3_RS17485 RNA polymerase sigma factor FliA low > 76
Ralstonia solanacearum GMI1000 0.20 RS_RS19055 flagellar export protein FliJ 0.43 RS_RS23830 RNA polymerase sigma factor FliA low > 80
Rhodanobacter sp000427505 FW510-R12 0.20 LRK53_RS15060 flagellar export protein FliJ 0.52 LRK53_RS14995 RNA polymerase sigma factor FliA low > 60
Variovorax sp. SCN45 0.19 GFF5746 Flagellar protein FliJ 0.39 GFF5774 RNA polymerase sigma factor for flagellar operon low > 127
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS22060 flagellar export protein FliJ 0.43 ABZR87_RS18040 RNA polymerase sigma factor FliA 0.92 20
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS10290 flagellar biosynthesis protein FliJ 0.46 HSERO_RS10160 flagellar biosynthesis sigma factor 0.92 17
Shewanella amazonensis SB2B 0.19 Sama_2293 flagellar protein FliJ (RefSeq) 0.54 Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) 0.99 8
Vibrio cholerae E7946 ATCC 55056 0.19 CSW01_10630 flagella biosynthesis chaperone FliJ 0.52 CSW01_10335 RNA polymerase sigma factor FliA low > 62
Serratia liquefaciens MT49 0.18 IAI46_15860 flagella biosynthesis chaperone FliJ 0.41 IAI46_15785 RNA polymerase sigma factor FliA low > 86
Marinobacter adhaerens HP15 0.18 HP15_2322 flagellar FliJ protein 0.58 HP15_2302 flagellar biosynthesis sigma factor FliA low > 73
Pectobacterium carotovorum WPP14 0.18 HER17_RS08260 flagella biosynthesis chaperone FliJ 0.41 HER17_RS08355 RNA polymerase sigma factor FliA 0.90 13
Rahnella sp. WP5 0.18 EX31_RS09560 flagella biosynthesis chaperone FliJ 0.41 EX31_RS09450 RNA polymerase sigma factor FliA 0.64 9
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS13515 flagellar export protein FliJ 0.53 LRK54_RS13580 RNA polymerase sigma factor FliA 0.38 5
Rhodanobacter denitrificans MT42 0.17 LRK55_RS13255 flagellar export protein FliJ 0.53 LRK55_RS13320 RNA polymerase sigma factor FliA low > 63
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS23550 flagellar export protein FliJ 0.42 RR42_RS35750 DNA-directed RNA polymerase sigma-70 factor low > 128
Paraburkholderia sabiae LMG 24235 0.17 QEN71_RS28815 flagellar export protein FliJ 0.45 QEN71_RS28940 RNA polymerase sigma factor FliA 0.92 69
Escherichia coli BW25113 0.17 b1942 fliJ flagellar biosynthesis chaperone (NCBI) 0.42 b1922 fliA flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) 0.15 39

Not shown: 0 genomes with orthologs for Psyr_3453 only; 38 genomes with orthologs for Psyr_3437 only