Conservation of cofitness between Psyr_1655 and Psyr_3095 in Pseudomonas syringae pv. syringae B728a

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1655 TatD-related deoxyribonuclease 1.0 Psyr_3095 transport system permease protein 0.41 10
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1655 TatD-related deoxyribonuclease 1.00 Psyr_3095 transport system permease protein low > 86
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS23020 TatD family hydrolase 0.77 PFLU_RS20715 iron ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.89 PFLU_RS23020 TatD family hydrolase 0.77 PFLU_RS20715 iron ABC transporter permease low > 109
Pseudomonas simiae WCS417 0.89 PS417_21405 hydrolase TatD 0.77 PS417_18730 ABC transporter permease low > 88
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_20205 hydrolase TatD 0.74 AO356_16425 ABC transporter permease low > 104
Pseudomonas sp. S08-1 0.86 OH686_22180 Uncharacterized metal-dependent hydrolase YcfH 0.18 OH686_17300 Heme ABC transporter, permease protein HmuU low > 80
Pseudomonas putida KT2440 0.85 PP_1967 tRNA D-aminoacylase 0.65 PP_2417 putative Iron ABC transporter, permease protein low > 96
Pseudomonas stutzeri RCH2 0.84 Psest_1696 hydrolase, TatD family 0.23 Psest_1024 ABC-type Fe3+-siderophore transport system, permease component low > 67
Serratia liquefaciens MT49 0.49 IAI46_09825 metal-dependent hydrolase 0.29 IAI46_06470 iron ABC transporter permease low > 86
Erwinia tracheiphila SCR3 0.48 LU632_RS14785 metal-dependent hydrolase 0.23 LU632_RS17285 iron ABC transporter permease low > 74
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS10885 DNAase 0.23 RR42_RS16135 ABC transporter permease low > 128
Dechlorosoma suillum PS 0.47 Dsui_2652 hydrolase, TatD family 0.24 Dsui_0530 ABC-type Fe3+-siderophore transport system, permease component low > 51
Pantoea sp. MT58 0.47 IAI47_12035 metal-dependent hydrolase 0.24 IAI47_06690 iron ABC transporter permease low > 76
Ralstonia solanacearum GMI1000 0.47 RS_RS09020 TatD family deoxyribonuclease 0.19 RS_RS12045 iron ABC transporter permease low > 80
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS12460 TatD family hydrolase 0.22 ABZR87_RS00090 iron ABC transporter permease low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3382 Putative deoxyribonuclease YcfH 0.22 GFF3529 Vitamin B12 ABC transporter, permease component BtuC low > 78
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS12995 DNAase 0.20 HSERO_RS21915 iron-siderophore ABC transporter permease low > 78
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS01010 TatD family deoxyribonuclease 0.19 RALBFv3_RS04490 iron ABC transporter permease low > 76
Ralstonia solanacearum UW163 0.45 UW163_RS14320 TatD family deoxyribonuclease 0.19 UW163_RS09180 iron ABC transporter permease
Escherichia coli Nissle 1917 0.45 ECOLIN_RS06350 metal-dependent hydrolase 0.24 ECOLIN_RS20060 heme ABC transporter permease ShuU/ChuU low > 55
Escherichia coli ECRC101 0.45 MCAODC_22900 ycfH metal-dependent hydrolase 0.24 MCAODC_06840 chuU heme permease protein ChuU low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02566 putative metal-dependent hydrolase YcfH 0.22 OHPLBJKB_02022 Vitamin B12 import system permease protein BtuC low > 73
Escherichia coli ECOR38 0.45 HEPCGN_23940 ycfH metal-dependent hydrolase 0.24 HEPCGN_15225 shuU heme ABC transporter permease ShuU/ChuU low > 87
Escherichia coli ECRC100 0.45 OKFHMN_03540 ycfH metal-dependent hydrolase 0.24 OKFHMN_16325 chuU heme permease protein ChuU low > 80
Escherichia coli ECRC99 0.45 KEDOAH_24215 ycfH metal-dependent hydrolase 0.24 KEDOAH_11820 chuU heme permease protein ChuU
Escherichia coli ECOR27 0.45 NOLOHH_21070 ycfH metal-dependent hydrolase 0.22 NOLOHH_17620 btuC vitamin B12 ABC transporter permease BtuC
Escherichia coli ECRC98 0.45 JDDGAC_07200 ycfH metal-dependent hydrolase 0.24 JDDGAC_19955 chuU heme permease protein ChuU low > 86
Escherichia coli ECRC102 0.45 NIAGMN_24290 ycfH metal-dependent hydrolase 0.24 NIAGMN_14090 chuU heme permease protein ChuU
Escherichia fergusonii Becca 0.45 EFB2_02875 putative metal-dependent hydrolase YcfH 0.24 EFB2_00303 Hemin transport system permease protein HmuU low > 86
Enterobacter sp. TBS_079 0.45 MPMX20_01780 putative metal-dependent hydrolase YcfH 0.24 MPMX20_01902 Vitamin B12 import system permease protein BtuC low > 85
Enterobacter asburiae PDN3 0.44 EX28DRAFT_1829 hydrolase, TatD family 0.48 EX28DRAFT_2824 ABC-type Fe3+-siderophore transport system, permease component low > 76
Castellaniella sp019104865 MT123 0.44 ABCV34_RS03960 TatD family hydrolase 0.23 ABCV34_RS11140 iron ABC transporter permease low > 48
Azospirillum brasilense Sp245 0.42 AZOBR_RS08795 LuxR family transcriptional regulator 0.23 AZOBR_RS19150 ABC transporter permease low > 97
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS21805 TatD family hydrolase 0.22 QEN71_RS31160 iron ABC transporter permease low > 153
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_0126 hydrolase, TatD family 0.22 Ga0059261_0623 ABC-type Fe3+-siderophore transport system, permease component low > 68
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF4665 Putative deoxyribonuclease YcfH 0.23 GFF4676 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) low > 90
Rhodospirillum rubrum S1H 0.39 Rru_A1700 TatD-related deoxyribonuclease (NCBI) 0.58 Rru_A1137 transport system permease protein (NCBI) low > 58
Sinorhizobium meliloti 1021 0.39 SMc01193 hypothetical protein 0.67 SM_b20057 ABC transporter permease
Agrobacterium fabrum C58 0.37 Atu1495 hypothetical protein 0.62 Atu3395 iron (III ABC transporter permease ABC transporter permease low > 89
Rhizobium sp. OAE497 0.36 ABIE40_RS09480 TatD family hydrolase 0.31 ABIE40_RS14430 iron ABC transporter permease low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS04755 TatD family hydrolase 0.19 A4249_RS05460 iron ABC transporter permease low > 48
Fusobacterium nucleatum SB010 0.32 HUW76_08855 TatD family hydrolase 0.26 HUW76_10040 iron ABC transporter permease low > 35
Marinobacter adhaerens HP15 0.31 HP15_3420 hydrolase, TatD family 0.25 HP15_3955 bacterial transport system permease protein low > 73
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_01898 Mg-dependent Dnase TatD 0.22 CCNA_01250 FecCD-family transporter protein 0.68 35
Caulobacter crescentus NA1000 0.29 CCNA_01898 Mg-dependent Dnase TatD 0.22 CCNA_01250 FecCD-family transporter protein low > 66
Desulfovibrio vulgaris Hildenborough JW710 0.26 DVU3202 hydrolase, TatD family (TIGR) 0.23 DVU0649 iron compound ABC transporter, permease protein (TIGR) low > 55

Not shown: 42 genomes with orthologs for Psyr_1655 only; 8 genomes with orthologs for Psyr_3095 only