Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_1655 | | TatD-related deoxyribonuclease | 1.0 | Psyr_3095 | | transport system permease protein | 0.41 | 10 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_1655 | | TatD-related deoxyribonuclease | 1.00 | Psyr_3095 | | transport system permease protein | low | > 86 |
Pseudomonas fluorescens SBW25-INTG | 0.89 | PFLU_RS23020 | | TatD family hydrolase | 0.77 | PFLU_RS20715 | | iron ABC transporter permease | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.89 | PFLU_RS23020 | | TatD family hydrolase | 0.77 | PFLU_RS20715 | | iron ABC transporter permease | low | > 109 |
Pseudomonas simiae WCS417 | 0.89 | PS417_21405 | | hydrolase TatD | 0.77 | PS417_18730 | | ABC transporter permease | low | > 88 |
Pseudomonas fluorescens FW300-N2C3 | 0.89 | AO356_20205 | | hydrolase TatD | 0.74 | AO356_16425 | | ABC transporter permease | low | > 104 |
Pseudomonas sp. S08-1 | 0.86 | OH686_22180 | | Uncharacterized metal-dependent hydrolase YcfH | 0.18 | OH686_17300 | | Heme ABC transporter, permease protein HmuU | low | > 80 |
Pseudomonas putida KT2440 | 0.85 | PP_1967 | | tRNA D-aminoacylase | 0.65 | PP_2417 | | putative Iron ABC transporter, permease protein | low | > 96 |
Pseudomonas stutzeri RCH2 | 0.84 | Psest_1696 | | hydrolase, TatD family | 0.23 | Psest_1024 | | ABC-type Fe3+-siderophore transport system, permease component | low | > 67 |
Serratia liquefaciens MT49 | 0.49 | IAI46_09825 | | metal-dependent hydrolase | 0.29 | IAI46_06470 | | iron ABC transporter permease | low | > 86 |
Erwinia tracheiphila SCR3 | 0.48 | LU632_RS14785 | | metal-dependent hydrolase | 0.23 | LU632_RS17285 | | iron ABC transporter permease | low | > 74 |
Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS10885 | | DNAase | 0.23 | RR42_RS16135 | | ABC transporter permease | low | > 128 |
Dechlorosoma suillum PS | 0.47 | Dsui_2652 | | hydrolase, TatD family | 0.24 | Dsui_0530 | | ABC-type Fe3+-siderophore transport system, permease component | low | > 51 |
Pantoea sp. MT58 | 0.47 | IAI47_12035 | | metal-dependent hydrolase | 0.24 | IAI47_06690 | | iron ABC transporter permease | low | > 76 |
Ralstonia solanacearum GMI1000 | 0.47 | RS_RS09020 | | TatD family deoxyribonuclease | 0.19 | RS_RS12045 | | iron ABC transporter permease | low | > 80 |
Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS12460 | | TatD family hydrolase | 0.22 | ABZR87_RS00090 | | iron ABC transporter permease | low | > 80 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.46 | GFF3382 | | Putative deoxyribonuclease YcfH | 0.22 | GFF3529 | | Vitamin B12 ABC transporter, permease component BtuC | low | > 78 |
Herbaspirillum seropedicae SmR1 | 0.46 | HSERO_RS12995 | | DNAase | 0.20 | HSERO_RS21915 | | iron-siderophore ABC transporter permease | low | > 78 |
Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS01010 | | TatD family deoxyribonuclease | 0.19 | RALBFv3_RS04490 | | iron ABC transporter permease | low | > 76 |
Ralstonia solanacearum UW163 | 0.45 | UW163_RS14320 | | TatD family deoxyribonuclease | 0.19 | UW163_RS09180 | | iron ABC transporter permease | — | — |
Escherichia coli Nissle 1917 | 0.45 | ECOLIN_RS06350 | | metal-dependent hydrolase | 0.24 | ECOLIN_RS20060 | | heme ABC transporter permease ShuU/ChuU | low | > 55 |
Escherichia coli ECRC101 | 0.45 | MCAODC_22900 | ycfH | metal-dependent hydrolase | 0.24 | MCAODC_06840 | chuU | heme permease protein ChuU | low | > 87 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.45 | OHPLBJKB_02566 | | putative metal-dependent hydrolase YcfH | 0.22 | OHPLBJKB_02022 | | Vitamin B12 import system permease protein BtuC | low | > 73 |
Escherichia coli ECOR38 | 0.45 | HEPCGN_23940 | ycfH | metal-dependent hydrolase | 0.24 | HEPCGN_15225 | shuU | heme ABC transporter permease ShuU/ChuU | low | > 87 |
Escherichia coli ECRC100 | 0.45 | OKFHMN_03540 | ycfH | metal-dependent hydrolase | 0.24 | OKFHMN_16325 | chuU | heme permease protein ChuU | low | > 80 |
Escherichia coli ECRC99 | 0.45 | KEDOAH_24215 | ycfH | metal-dependent hydrolase | 0.24 | KEDOAH_11820 | chuU | heme permease protein ChuU | — | — |
Escherichia coli ECOR27 | 0.45 | NOLOHH_21070 | ycfH | metal-dependent hydrolase | 0.22 | NOLOHH_17620 | btuC | vitamin B12 ABC transporter permease BtuC | — | — |
Escherichia coli ECRC98 | 0.45 | JDDGAC_07200 | ycfH | metal-dependent hydrolase | 0.24 | JDDGAC_19955 | chuU | heme permease protein ChuU | low | > 86 |
Escherichia coli ECRC102 | 0.45 | NIAGMN_24290 | ycfH | metal-dependent hydrolase | 0.24 | NIAGMN_14090 | chuU | heme permease protein ChuU | — | — |
Escherichia fergusonii Becca | 0.45 | EFB2_02875 | | putative metal-dependent hydrolase YcfH | 0.24 | EFB2_00303 | | Hemin transport system permease protein HmuU | low | > 86 |
Enterobacter sp. TBS_079 | 0.45 | MPMX20_01780 | | putative metal-dependent hydrolase YcfH | 0.24 | MPMX20_01902 | | Vitamin B12 import system permease protein BtuC | low | > 85 |
Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_1829 | | hydrolase, TatD family | 0.48 | EX28DRAFT_2824 | | ABC-type Fe3+-siderophore transport system, permease component | low | > 76 |
Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS03960 | | TatD family hydrolase | 0.23 | ABCV34_RS11140 | | iron ABC transporter permease | low | > 48 |
Azospirillum brasilense Sp245 | 0.42 | AZOBR_RS08795 | | LuxR family transcriptional regulator | 0.23 | AZOBR_RS19150 | | ABC transporter permease | low | > 97 |
Paraburkholderia sabiae LMG 24235 | 0.42 | QEN71_RS21805 | | TatD family hydrolase | 0.22 | QEN71_RS31160 | | iron ABC transporter permease | low | > 153 |
Sphingomonas koreensis DSMZ 15582 | 0.40 | Ga0059261_0126 | | hydrolase, TatD family | 0.22 | Ga0059261_0623 | | ABC-type Fe3+-siderophore transport system, permease component | low | > 68 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF4665 | | Putative deoxyribonuclease YcfH | 0.23 | GFF4676 | | Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) | low | > 90 |
Rhodospirillum rubrum S1H | 0.39 | Rru_A1700 | | TatD-related deoxyribonuclease (NCBI) | 0.58 | Rru_A1137 | | transport system permease protein (NCBI) | low | > 58 |
Sinorhizobium meliloti 1021 | 0.39 | SMc01193 | | hypothetical protein | 0.67 | SM_b20057 | | ABC transporter permease | — | — |
Agrobacterium fabrum C58 | 0.37 | Atu1495 | | hypothetical protein | 0.62 | Atu3395 | | iron (III ABC transporter permease ABC transporter permease | low | > 89 |
Rhizobium sp. OAE497 | 0.36 | ABIE40_RS09480 | | TatD family hydrolase | 0.31 | ABIE40_RS14430 | | iron ABC transporter permease | low | > 107 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.34 | A4249_RS04755 | | TatD family hydrolase | 0.19 | A4249_RS05460 | | iron ABC transporter permease | low | > 48 |
Fusobacterium nucleatum SB010 | 0.32 | HUW76_08855 | | TatD family hydrolase | 0.26 | HUW76_10040 | | iron ABC transporter permease | low | > 35 |
Marinobacter adhaerens HP15 | 0.31 | HP15_3420 | | hydrolase, TatD family | 0.25 | HP15_3955 | | bacterial transport system permease protein | low | > 73 |
Caulobacter crescentus NA1000 Δfur | 0.29 | CCNA_01898 | | Mg-dependent Dnase TatD | 0.22 | CCNA_01250 | | FecCD-family transporter protein | 0.68 | 35 |
Caulobacter crescentus NA1000 | 0.29 | CCNA_01898 | | Mg-dependent Dnase TatD | 0.22 | CCNA_01250 | | FecCD-family transporter protein | low | > 66 |
Desulfovibrio vulgaris Hildenborough JW710 | 0.26 | DVU3202 | | hydrolase, TatD family (TIGR) | 0.23 | DVU0649 | | iron compound ABC transporter, permease protein (TIGR) | low | > 55 |
Not shown: 42 genomes with orthologs for Psyr_1655 only; 8 genomes with orthologs for Psyr_3095 only