Conservation of cofitness between Psyr_0056 and Psyr_2017 in Pseudomonas syringae pv. syringae B728a

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0056 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1.0 Psyr_2017 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein 0.36 11
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0056 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1.00 Psyr_2017 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein low > 86
Pseudomonas sp. RS175 0.67 PFR28_04361 Regulator of sigma D 0.93 PFR28_03086 Chaperone protein HtpG low > 88
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_4435 Regulator of sigma D 0.94 Pf6N2E2_5865 Chaperone protein HtpG low > 103
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_12810 transcriptional regulator 0.93 AO356_19745 heat-shock protein Hsp90 low > 104
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_2190 Regulator of sigma D 0.93 Pf1N1B4_3692 Chaperone protein HtpG low > 87
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_861 Regulator of sigma D 0.94 PfGW456L13_4258 Chaperone protein HtpG low > 87
Pseudomonas simiae WCS417 0.65 PS417_27505 transcriptional regulator 0.90 PS417_08945 heat shock protein 90 low > 88
Pseudomonas sp. S08-1 0.65 OH686_13925 Alginate regulatory protein AlgQ, positive transcriptional regulator of AlgD 0.89 OH686_00400 Chaperone protein HtpG low > 80
Pseudomonas orientalis W4I3 0.65 QF045_RS01865 sigma D regulator 0.93 QF045_RS11640 molecular chaperone HtpG low > 93
Pseudomonas segetis P6 0.64 ACVTMO_RS22410 Rsd/AlgQ family anti-sigma factor 0.89 ACVTMO_RS13370 htpG molecular chaperone HtpG low > 75
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS29185 Rsd/AlgQ family anti-sigma factor 0.92 PFLU_RS09005 molecular chaperone HtpG 0.21 100
Pseudomonas lactucae CFBP13502 0.64 GEMAOFIL_05639 Regulator of sigma D 0.89 GEMAOFIL_01919 Chaperone protein HtpG low > 96
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_08965 transcriptional regulator 0.93 AO353_01780 heat-shock protein Hsp90 low > 101
Pseudomonas fluorescens SBW25 0.64 PFLU_RS29185 Rsd/AlgQ family anti-sigma factor 0.92 PFLU_RS09005 molecular chaperone HtpG low > 109
Pseudomonas sp. DMC3 0.64 GFF353 Regulator of sigma D 0.93 GFF2531 Chaperone protein HtpG low > 89
Pseudomonas stutzeri RCH2 0.59 Psest_3743 Regulator of sigma D 0.88 Psest_2484 Molecular chaperone, HSP90 family low > 67
Pseudomonas aeruginosa PA14 0.58 IKLFDK_27180 Alginate regulatory protein AlgQ 0.90 IKLFDK_07645 molecular chaperone HtpG low > 98
Pseudomonas aeruginosa MRSN321 0.58 DY961_RS12155 rsd;go_process=regulation sigma D regulator 0.90 DY961_RS19630 htpG;go_function=ATP molecular chaperone HtpG low > 100
Pseudomonas aeruginosa PUPa3 0.58 DQ20_RS49965 rsd;go_process=regulation sigma D regulator 0.90 DQ20_RS53740 htpG;go_function=ATP molecular chaperone HtpG low > 101
Pseudomonas sp. SVBP6 0.57 COO64_RS01170 Rsd/AlgQ family anti-sigma factor 0.93 COO64_RS18945 htpG molecular chaperone HtpG low > 93
Pseudomonas putida KT2440 0.56 PP_0191 Transcriptional regulatory protein AlgQ 0.92 PP_4179 Chaperone protein HtpG low > 96
Pseudomonas sp. BP01 0.55 JOY50_RS18725 Rsd/AlgQ family anti-sigma factor 0.92 JOY50_RS19125 htpG molecular chaperone HtpG low > 84
Marinobacter adhaerens HP15 0.44 HP15_221 anti-RNA polymerase sigma 70 factor 0.70 HP15_1395 heat shock protein 90 low > 73
Shewanella sp. ANA-3 0.31 Shewana3_0434 anti-RNA polymerase sigma 70 factor (RefSeq) 0.61 Shewana3_2443 heat shock protein 90 (RefSeq) low > 73
Shewanella loihica PV-4 0.30 Shew_3423 anti-RNA polymerase sigma 70 factor (RefSeq) 0.63 Shew_2232 heat shock protein 90 (RefSeq) low > 60
Shewanella oneidensis MR-1 0.30 SO0433 rsd regulator of sigma D (NCBI ptt file) 0.61 SO2016 htpG heat shock protein HtpG (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.29 Sama_0386 anti-RNA polymerase sigma 70 factor (RefSeq) 0.63 Sama_1313 heat shock protein 90 (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.29 MIT1002_03798 Regulator of sigma D 0.63 MIT1002_02648 High temperature protein G low > 70
Klebsiella michiganensis M5al 0.25 BWI76_RS01560 Rsd/AlgQ family anti-sigma factor 0.61 BWI76_RS06835 molecular chaperone HtpG low > 92
Serratia liquefaciens MT49 0.25 IAI46_01325 Rsd/AlgQ family anti-sigma factor 0.59 IAI46_05245 molecular chaperone HtpG low > 87
Rahnella sp. WP5 0.24 EX31_RS16820 Rsd/AlgQ family anti-sigma factor 0.61 EX31_RS22530 molecular chaperone HtpG low > 89
Klebsiella pneumoniae MKP103 0.24 KDGMDA_10045 sigma D regulator 0.61 KDGMDA_14895 molecular chaperone HtpG low > 95
Pectobacterium carotovorum WPP14 0.23 HER17_RS20375 Rsd/AlgQ family anti-sigma factor 0.60 HER17_RS15690 molecular chaperone HtpG low > 75
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_01710 Rsd/AlgQ family anti-sigma factor 0.59 CSW01_05030 molecular chaperone HtpG low > 62
Enterobacter sp. TBS_079 0.22 MPMX20_00218 Regulator of sigma D 0.61 MPMX20_01075 Chaperone protein HtpG low > 85
Pantoea sp. MT58 0.22 IAI47_18080 Rsd/AlgQ family anti-sigma factor 0.60 IAI47_14460 molecular chaperone HtpG low > 76
Pantoea agglomerans CFBP13505 P0401 0.22 PagCFBP13505_RS22615 Rsd/AlgQ family anti-sigma factor 0.61 PagCFBP13505_RS10735 molecular chaperone HtpG low > 74
Enterobacter asburiae PDN3 0.22 EX28DRAFT_4537 Regulator of sigma D 0.61 EX28DRAFT_2484 Molecular chaperone, HSP90 family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF4197 Regulator of sigma D 0.61 GFF4391 Chaperone protein HtpG low > 78
Escherichia coli Nissle 1917 0.21 ECOLIN_RS23045 sigma D regulator 0.61 ECOLIN_RS02810 molecular chaperone HtpG low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_04055 Regulator of sigma D 0.61 OHPLBJKB_03201 Chaperone protein HtpG 0.57 70
Escherichia coli ECRC102 0.21 NIAGMN_11120 rsd sigma D regulator 0.61 NIAGMN_06205 htpG molecular chaperone HtpG low > 80
Escherichia coli BW25113 0.21 b3995 rsd stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) 0.61 b0473 htpG heat shock protein 90 (NCBI) low > 76
Escherichia coli ECOR38 0.21 HEPCGN_12005 rsd sigma D regulator 0.61 HEPCGN_06765 htpG molecular chaperone HtpG low > 88
Escherichia coli BL21 0.21 ECD_03872 stationary phase protein, binds sigma 70 RNA polymerase subunit 0.61 ECD_00424 protein refolding molecular co-chaperone Hsp90, Hsp70-dependent; heat-shock protein; ATPase low > 61
Escherichia fergusonii Becca 0.21 EFB2_04616 Regulator of sigma D 0.61 EFB2_03585 Chaperone protein HtpG low > 86
Escherichia coli ECRC100 0.21 OKFHMN_13370 rsd sigma D regulator 0.61 OKFHMN_08150 htpG molecular chaperone HtpG low > 79
Escherichia coli ECRC101 0.21 MCAODC_03870 rsd sigma D regulator 0.61 MCAODC_27375 htpG molecular chaperone HtpG low > 87
Escherichia coli ECRC99 0.21 KEDOAH_14790 rsd sigma D regulator 0.61 KEDOAH_19815 htpG molecular chaperone HtpG
Escherichia coli ECOR27 0.21 NOLOHH_05515 rsd sigma D regulator 0.61 NOLOHH_01080 htpG molecular chaperone HtpG low > 76
Escherichia coli ECRC62 0.21 BNILDI_06010 rsd sigma D regulator 0.61 BNILDI_22500 htpG molecular chaperone HtpG low > 75
Escherichia coli ECRC98 0.21 JDDGAC_16995 rsd sigma D regulator 0.61 JDDGAC_11800 htpG molecular chaperone HtpG low > 87
Erwinia tracheiphila HP pepo 2.2 0.19 IJEDHG_10890 rsd sigma D regulator 0.59 IJEDHG_16650 htpG molecular chaperone HtpG
Erwinia tracheiphila SCR3 0.19 LU632_RS00975 Rsd/AlgQ family anti-sigma factor 0.59 LU632_RS18100 htpG molecular chaperone HtpG 0.50 64
Dickeya dadantii 3937 0.17 DDA3937_RS01180 Rsd/AlgQ family anti-sigma factor 0.61 DDA3937_RS05795 molecular chaperone HtpG low > 74
Erwinia amylovora T8 0.17 OLJFJH_06745 sigma D regulator 0.60 OLJFJH_17800 molecular chaperone HtpG low > 58
Dickeya dianthicola ME23 0.16 DZA65_RS01220 Rsd/AlgQ family anti-sigma factor 0.60 DZA65_RS06170 molecular chaperone HtpG low > 75
Dickeya dianthicola 67-19 0.16 HGI48_RS01175 sigma D regulator 0.60 HGI48_RS05845 molecular chaperone HtpG low > 71

Not shown: 0 genomes with orthologs for Psyr_0056 only; 44 genomes with orthologs for Psyr_2017 only