Conservation of cofitness between Psyr_2704 and Psyr_0598 in Pseudomonas syringae pv. syringae B728a

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2704 UDP-galactose 4-epimerase 1.0 Psyr_0598 amino acid/amide ABC transporter membrane protein 1, HAAT family 0.28 9
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2704 UDP-galactose 4-epimerase 1.00 Psyr_0598 amino acid/amide ABC transporter membrane protein 1, HAAT family low > 86
Castellaniella sp019104865 MT123 0.62 ABCV34_RS10235 UDP-glucose 4-epimerase GalE 0.68 ABCV34_RS09120 branched-chain amino acid ABC transporter permease LivH low > 48
Shewanella loihica PV-4 0.58 Shew_1433 UDP-glucose 4-epimerase (RefSeq) 0.20 Shew_2609 inner-membrane translocator (RefSeq) low > 60
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_5092 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.90 Pf1N1B4_1381 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) — —
Rahnella sp. WP5 0.56 EX31_RS23580 UDP-glucose 4-epimerase GalE 0.87 EX31_RS15620 branched-chain amino acid ABC transporter permease low > 89
Serratia liquefaciens MT49 0.55 IAI46_05365 UDP-glucose 4-epimerase GalE 0.85 IAI46_17080 branched-chain amino acid ABC transporter permease LivH low > 86
Enterobacter sp. TBS_079 0.54 MPMX20_01386 UDP-glucose 4-epimerase 0.88 MPMX20_02821 High-affinity branched-chain amino acid transport system permease protein LivH low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_2236 UDP-glucose-4-epimerase GalE 0.88 EX28DRAFT_0642 Branched-chain amino acid ABC-type transport system, permease components low > 76
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS04450 UDP-glucose 4-epimerase 0.43 BPHYT_RS31740 ABC transporter permease low > 109
Paraburkholderia graminis OAS925 0.52 ABIE53_001185 UDP-glucose 4-epimerase 0.42 ABIE53_003285 branched-chain amino acid transport system permease protein low > 113
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS19470 UDP-glucose 4-epimerase GalE 0.39 ABZR87_RS00310 branched-chain amino acid ABC transporter permease low > 80
Ralstonia solanacearum GMI1000 0.52 RS_RS22435 UDP-glucose 4-epimerase GalE 0.41 RS_RS12250 branched-chain amino acid ABC transporter permease low > 80
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_00074 UDP-galactose 4-epimerase 0.42 H281DRAFT_04062 amino acid/amide ABC transporter membrane protein 1, HAAT family low > 103
Ralstonia solanacearum PSI07 0.52 RPSI07_RS05120 UDP-glucose 4-epimerase GalE 0.41 RPSI07_RS12695 branched-chain amino acid ABC transporter permease low > 81
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS35875 UDP-galactose-4-epimerase 0.57 RR42_RS14420 branched-chain amino acid transporter permease subunit LivH low > 128
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS25435 UDP-glucose 4-epimerase GalE 0.43 QEN71_RS03105 branched-chain amino acid ABC transporter permease low > 153
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS18435 UDP-glucose 4-epimerase GalE 0.41 RALBFv3_RS04690 branched-chain amino acid ABC transporter permease low > 76
Ralstonia solanacearum UW163 0.52 UW163_RS20695 UDP-glucose 4-epimerase GalE 0.41 UW163_RS08980 branched-chain amino acid ABC transporter permease — —
Dechlorosoma suillum PS 0.52 Dsui_0398 UDP-glucose-4-epimerase 0.43 Dsui_0629 branched-chain amino acid ABC-type transport system, permease component low > 51
Variovorax sp. OAS795 0.50 ABID97_RS05765 UDP-glucose 4-epimerase GalE 0.54 ABID97_RS27580 branched-chain amino acid ABC transporter permease LivH low > 91
Variovorax sp. SCN45 0.49 GFF68 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.41 GFF6033 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3323 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.42 GFF778 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) — —
Azospirillum sp. SherDot2 0.36 MPMX19_04151 UDP-glucose 4-epimerase 0.55 MPMX19_06002 High-affinity branched-chain amino acid transport system permease protein LivH — —
Fusobacterium nucleatum SB010 0.35 HUW76_00075 UDP-glucose 4-epimerase GalE 0.35 HUW76_08110 branched-chain amino acid ABC transporter permease low > 35
Azospirillum brasilense Sp245 0.35 AZOBR_RS22395 UDP-glucose 4-epimerase 0.55 AZOBR_RS08235 L-proline and D-alanine ABC transporter, permease component 1 (from data) low > 97
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU1360 galE UDP-glucose 4-epimerase (TIGR) 0.48 DVU0548 livH high-affinity branched-chain amino acid ABC transporter, permease protein (TIGR) low > 55
Agrobacterium fabrum C58 0.32 Atu4166 UDP-glucose 4-epimerase 0.52 Atu2427 ABC transporter, membrane spanning protein low > 89
Phaeobacter inhibens DSM 17395 0.31 PGA1_c34470 UDP-glucose 4-epimerase ExoB 0.21 PGA1_c02590 putative high-affinity branched-chain amino acid transport system permease protein LivH low > 62
Rhodopseudomonas palustris CGA009 0.31 TX73_023800 UDP-glucose 4-epimerase GalE 0.53 TX73_019710 branched-chain amino acid ABC transporter permease low > 86
Rhizobium sp. OAE497 0.31 ABIE40_RS02650 UDP-glucose 4-epimerase GalE 0.49 ABIE40_RS14715 branched-chain amino acid ABC transporter permease LivH low > 107
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_21135 UDP-galactose-4-epimerase 0.92 AO353_13345 branched-chain amino acid transporter permease subunit LivH low > 101
Sinorhizobium meliloti 1021 0.30 SMc02252 UDP-glucose 4-epimerase 0.50 SMc01951 high-affinity branched-chain amino acid ABC transporter permease low > 103
Desulfovibrio vulgaris Miyazaki F 0.29 DvMF_0137 UDP-glucose 4-epimerase (RefSeq) 0.47 DvMF_2608 inner-membrane translocator (RefSeq) — —
Bosea sp. OAE506 0.28 ABIE41_RS08585 UDP-glucose 4-epimerase GalE 0.49 ABIE41_RS13635 branched-chain amino acid ABC transporter permease LivH — —
Pseudomonas putida KT2440 0.27 PP_3129 UDP-glucose 4-epimerase 0.90 PP_4866 High-affinity branched-chain amino acid transport system permease protein BraD low > 96

Not shown: 48 genomes with orthologs for Psyr_2704 only; 10 genomes with orthologs for Psyr_0598 only