Conservation of cofitness between Psyr_4088 and Psyr_0544 in Pseudomonas syringae pv. syringae B728a

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4088 ketopantoate reductase 1.0 Psyr_0544 hydroxymethylpyrimidine synthase 0.36 6
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4088 ketopantoate reductase 1.00 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03645 2-dehydropantoate 2-reductase 0.94 AO353_13010 thiamine biosynthesis protein ThiC low > 101
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1839 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.94 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_651 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.94 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.95 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 103
Pseudomonas simiae WCS417 0.68 PS417_22515 2-dehydropantoate 2-reductase 0.96 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Pseudomonas sp. RS175 0.68 PFR28_03426 2-dehydropantoate 2-reductase 0.95 PFR28_05091 Phosphomethylpyrimidine synthase low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17955 2-dehydropantoate 2-reductase 0.95 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Pseudomonas fluorescens SBW25 0.67 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.96 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.96 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas putida KT2440 0.65 PP_1351 putative 2-dehydropantoate 2-reductase 0.91 PP_4922 Phosphomethylpyrimidine synthase low > 96
Pseudomonas sp. S08-1 0.60 OH686_08220 2-dehydropantoate 2-reductase 0.90 OH686_15885 phosphomethylpyrimidine synthase low > 80
Pseudomonas stutzeri RCH2 0.57 Psest_1140 2-dehydropantoate 2-reductase 0.90 Psest_0477 thiamine biosynthesis protein ThiC low > 67
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_11730 2-dehydropantoate 2-reductase 0.69 CSW01_00335 phosphomethylpyrimidine synthase low > 62
Shewanella sp. ANA-3 0.23 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.69 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) low > 73
Shewanella oneidensis MR-1 0.23 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.70 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) low > 76
Enterobacter sp. TBS_079 0.22 MPMX20_01016 2-dehydropantoate 2-reductase 0.71 MPMX20_00217 Phosphomethylpyrimidine synthase low > 85
Serratia liquefaciens MT49 0.22 IAI46_04950 2-dehydropantoate 2-reductase 0.70 IAI46_01320 phosphomethylpyrimidine synthase ThiC low > 86
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.71 EX28DRAFT_4536 phosphomethylpyrimidine synthase low > 76
Klebsiella michiganensis M5al 0.21 BWI76_RS06405 2-dehydropantoate 2-reductase 0.71 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC low > 92
Alteromonas macleodii MIT1002 0.21 MIT1002_01217 2-dehydropantoate 2-reductase 0.68 MIT1002_00097 Phosphomethylpyrimidine synthase 0.65 35
Marinobacter adhaerens HP15 0.21 HP15_1312 2-dehydropantoate 2-reductase 0.81 HP15_453 thiamine biosynthesis protein thiC low > 73
Shewanella loihica PV-4 0.21 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.72 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) low > 60
Dickeya dianthicola ME23 0.21 DZA65_RS05940 2-dehydropantoate 2-reductase 0.70 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.82 18
Escherichia coli Nissle 1917 0.20 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.72 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.60 11
Escherichia coli ECRC101 0.20 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.72 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.88 4
Escherichia coli ECRC102 0.20 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.72 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli BW25113 0.20 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.72 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) low > 76
Escherichia coli ECRC98 0.20 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.72 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC low > 86
Escherichia coli ECRC99 0.20 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.72 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECOR38 0.20 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.71 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC low > 87
Rahnella sp. WP5 0.20 EX31_RS22180 2-dehydropantoate 2-reductase 0.71 EX31_RS16815 phosphomethylpyrimidine synthase ThiC low > 89
Escherichia coli ECRC100 0.20 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.72 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC low > 80
Escherichia coli ECOR27 0.20 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.72 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.76 8
Erwinia tracheiphila SCR3 0.20 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.71 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC low > 74
Escherichia coli BL21 0.20 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.71 ECD_03871 phosphomethylpyrimidine synthase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.72 OHPLBJKB_04056 Phosphomethylpyrimidine synthase low > 73
Dickeya dadantii 3937 0.20 DDA3937_RS05555 2-dehydropantoate 2-reductase 0.73 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.84 26
Escherichia coli ECRC62 0.20 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.72 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.68 40
Escherichia fergusonii Becca 0.20 EFB2_03632 2-dehydropantoate 2-reductase 0.72 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Dickeya dianthicola 67-19 0.20 HGI48_RS05615 2-dehydropantoate 2-reductase 0.71 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.79 25
Pantoea sp. MT58 0.20 IAI47_14715 2-dehydropantoate 2-reductase 0.71 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Pectobacterium carotovorum WPP14 0.19 HER17_RS15910 2-dehydropantoate 2-reductase 0.72 HER17_RS20380 phosphomethylpyrimidine synthase ThiC low > 75
Shewanella amazonensis SB2B 0.18 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.71 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) — —
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS15450 2-dehydropantoate 2-reductase 0.72 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC low > 80
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS05755 2-dehydropantoate 2-reductase 0.76 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC low > 78
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS32960 2-dehydropantoate 2-reductase 0.71 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128

Not shown: 1 genomes with orthologs for Psyr_4088 only; 46 genomes with orthologs for Psyr_0544 only