Conservation of cofitness between Psyr_4010 and Psyr_0544 in Pseudomonas syringae pv. syringae B728a

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4010 Citrate-proton symport 1.0 Psyr_0544 hydroxymethylpyrimidine synthase 0.42 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4010 Citrate-proton symport 1.00 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas simiae WCS417 0.86 PS417_06725 alpha-ketoglutarate permease 0.96 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS06750 MFS transporter 0.96 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25 0.86 PFLU_RS06750 MFS transporter 0.96 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_04915 alpha-ketoglutarate permease 0.95 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_4587 dicarboxylic acid transporter PcaT 0.94 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_17220 alpha-ketoglutarate permease 0.94 AO353_13010 thiamine biosynthesis protein ThiC low > 101
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_2832 dicarboxylic acid transporter PcaT 0.95 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 103
Pseudomonas sp. RS175 0.83 PFR28_00625 Alpha-ketoglutarate permease 0.95 PFR28_05091 Phosphomethylpyrimidine synthase low > 88
Pseudomonas putida KT2440 0.81 PP_1378 alpha-ketoglutarate permease 0.91 PP_4922 Phosphomethylpyrimidine synthase low > 96
Variovorax sp. SCN45 0.76 GFF5985 dicarboxylic acid transporter PcaT 0.68 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) low > 127
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS21430 alpha-ketoglutarate permease 0.71 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128
Variovorax sp. OAS795 0.74 ABID97_RS08005 MFS family transporter 0.67 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC low > 91
Serratia liquefaciens MT49 0.68 IAI46_20040 MFS transporter 0.70 IAI46_01320 phosphomethylpyrimidine synthase ThiC low > 86
Ralstonia solanacearum GMI1000 0.68 RS_RS17550 MFS transporter 0.72 RS_RS00555 phosphomethylpyrimidine synthase low > 80
Pectobacterium carotovorum WPP14 0.67 HER17_RS04420 MFS transporter 0.72 HER17_RS20380 phosphomethylpyrimidine synthase ThiC low > 75
Paraburkholderia graminis OAS925 0.67 ABIE53_002314 MHS family alpha-ketoglutarate permease-like MFS transporter 0.75 ABIE53_002857 phosphomethylpyrimidine synthase low > 113
Rahnella sp. WP5 0.67 EX31_RS13690 MFS transporter 0.71 EX31_RS16815 phosphomethylpyrimidine synthase ThiC low > 89
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS16635 MFS family transporter 0.72 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC low > 80
Pantoea sp. MT58 0.66 IAI47_04465 MFS transporter 0.71 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS07390 MFS family transporter 0.75 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.47 71
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_05236 MFS transporter, MHS family, alpha-ketoglutarate permease 0.75 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS16820 2-oxoglutarate:H+ symporter (from data) 0.76 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC low > 78
Ralstonia solanacearum PSI07 0.65 RPSI07_RS00265 MFS transporter 0.72 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC low > 81
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF2093 Alpha-ketoglutarate permease 0.71 GFF4198 Thiamin biosynthesis protein ThiC low > 78
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS11175 alpha-ketoglutarate transporter 0.75 BPHYT_RS13220 phosphomethylpyrimidine synthase low > 109
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS22995 MFS transporter 0.72 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC low > 76
Ralstonia solanacearum UW163 0.65 UW163_RS23615 MFS transporter 0.72 UW163_RS03640 phosphomethylpyrimidine synthase ThiC — —
Enterobacter asburiae PDN3 0.64 EX28DRAFT_0060 metabolite-proton symporter 0.71 EX28DRAFT_4536 phosphomethylpyrimidine synthase low > 76
Dickeya dianthicola ME23 0.64 DZA65_RS17945 MFS transporter 0.70 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.47 9
Dickeya dianthicola 67-19 0.64 HGI48_RS16870 MFS transporter 0.71 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC low > 71
Enterobacter sp. TBS_079 0.64 MPMX20_03456 Alpha-ketoglutarate permease 0.71 MPMX20_00217 Phosphomethylpyrimidine synthase low > 85
Dickeya dadantii 3937 0.64 DDA3937_RS16800 MFS transporter 0.73 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC low > 74
Escherichia coli Nissle 1917 0.62 ECOLIN_RS14640 alpha-ketoglutarate permease 0.72 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC low > 55
Escherichia fergusonii Becca 0.62 EFB2_01309 Alpha-ketoglutarate permease 0.72 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Escherichia coli ECRC98 0.62 JDDGAC_24965 kgtP alpha-ketoglutarate permease 0.72 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC low > 86
Escherichia coli ECRC102 0.62 NIAGMN_19070 kgtP alpha-ketoglutarate permease 0.72 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC101 0.62 MCAODC_11830 kgtP alpha-ketoglutarate permease 0.72 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC low > 87
Escherichia coli ECRC99 0.62 KEDOAH_06920 kgtP alpha-ketoglutarate permease 0.72 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_01119 Alpha-ketoglutarate permease 0.72 OHPLBJKB_04056 Phosphomethylpyrimidine synthase low > 73
Escherichia coli ECOR38 0.62 HEPCGN_20425 kgtP alpha-ketoglutarate permease 0.71 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC low > 87
Escherichia coli ECRC100 0.62 OKFHMN_21300 kgtP alpha-ketoglutarate permease 0.72 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC low > 80
Escherichia coli BW25113 0.62 b2587 kgtP alpha-ketoglutarate transporter (NCBI) 0.72 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) low > 76
Escherichia coli ECOR27 0.62 NOLOHH_12970 kgtP alpha-ketoglutarate permease 0.72 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli ECRC62 0.62 BNILDI_11775 kgtP alpha-ketoglutarate permease 0.72 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli BL21 0.62 ECD_02481 alpha-ketoglutarate transporter 0.71 ECD_03871 phosphomethylpyrimidine synthase low > 61
Klebsiella michiganensis M5al 0.62 BWI76_RS21415 MFS transporter 0.71 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC low > 92
Acinetobacter radioresistens SK82 0.52 MPMX26_01705 Alpha-ketoglutarate permease 0.74 MPMX26_00180 Phosphomethylpyrimidine synthase low > 36
Castellaniella sp019104865 MT123 0.48 ABCV34_RS09940 MFS transporter 0.75 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC low > 48

Not shown: 0 genomes with orthologs for Psyr_4010 only; 44 genomes with orthologs for Psyr_0544 only