Conservation of cofitness between Psyr_0506 and Psyr_0315 in Pseudomonas syringae pv. syringae B728a

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase 1.0 Psyr_0315 Protein of unknown function DUF589 0.28 15
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0506 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase 1.00 Psyr_0315 Protein of unknown function DUF589 low > 86
Pseudomonas simiae WCS417 0.91 PS417_02175 transcriptional regulator 0.79 PS417_27315 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.91 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.80 PFLU_RS28970 EVE domain-containing protein low > 109
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_223 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.79 PfGW456L13_890 FIG006231: RNA-binding protein low > 87
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS02230 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.80 PFLU_RS28970 EVE domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_1489 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.80 Pf1N1B4_2223 FIG006231: RNA-binding protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3685 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.79 Pf6N2E2_4474 FIG006231: RNA-binding protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_09015 transcriptional regulator 0.78 AO356_12985 hypothetical protein low > 104
Pseudomonas sp. RS175 0.91 PFR28_05053 Bifunctional protein PutA 0.75 PFR28_04327 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_12810 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.76 AO353_08785 hypothetical protein low > 101
Pseudomonas putida KT2440 0.88 PP_4947 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase 0.79 PP_5205 conserved protein of unknown function low > 96
Pseudomonas sp. S08-1 0.76 OH686_06735 Transcriptional repressor of PutA and PutP / Proline dehydrogenase / Delta-1-pyrroline-5-carboxylate dehydrogenase 0.75 OH686_11235 Protein of unknown function DUF55 low > 80
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS20125 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.46 RR42_RS16155 RNA-binding protein low > 128
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS03970 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.48 ABZR87_RS00115 EVE domain-containing protein low > 80
Ralstonia solanacearum GMI1000 0.69 RS_RS16540 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.47 RS_RS12065 EVE domain-containing protein low > 80
Ralstonia solanacearum UW163 0.68 UW163_RS04885 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.46 UW163_RS09155 EVE domain-containing protein — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS08725 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.46 RALBFv3_RS04515 EVE domain-containing protein low > 76
Ralstonia solanacearum PSI07 0.68 RPSI07_RS08540 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.48 RPSI07_RS12860 EVE domain-containing protein low > 81
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2850 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.45 Ac3H11_2176 FIG006231: RNA-binding protein low > 79
Variovorax sp. SCN45 0.64 GFF5175 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.5.2) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88) 0.44 GFF3613 Protein of unknown function DUF55 low > 127
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS19355 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 0.46 BPHYT_RS04835 hypothetical protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_02404 L-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase 0.46 H281DRAFT_00131 Predicted RNA-binding protein, contains PUA-like domain low > 103
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS29240 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.48 QEN71_RS25165 EVE domain-containing protein low > 153
Paraburkholderia graminis OAS925 0.60 ABIE53_000244 RHH-type proline utilization regulon transcriptional repressor/proline dehydrogenase/delta 1-pyrroline-5-carboxylate dehydrogenase 0.46 ABIE53_001243 putative RNA-binding protein with PUA-like domain low > 113
Azospirillum brasilense Sp245 0.56 AZOBR_RS23695 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.29 AZOBR_RS00280 ubiquinol-cytochrome C reductase low > 97
Azospirillum sp. SherDot2 0.55 MPMX19_05932 Bifunctional protein PutA 0.32 MPMX19_02040 hypothetical protein low > 112
Sinorhizobium meliloti 1021 0.53 SMc02181 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 0.27 SMc03227 hypothetical protein low > 103
Agrobacterium fabrum C58 0.53 Atu4157 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 0.26 Atu2648 hypothetical protein 0.24 30
Rhizobium sp. OAE497 0.52 ABIE40_RS23445 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 0.26 ABIE40_RS18045 EVE domain-containing protein low > 107
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_3926 L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 0.31 Ga0059261_3162 Uncharacterized conserved protein low > 68
Alteromonas macleodii MIT1002 0.38 MIT1002_00637 Bifunctional protein PutA 0.50 MIT1002_01794 EVE domain protein low > 70
Dinoroseobacter shibae DFL-12 0.37 Dshi_2311 delta-1-pyrroline-5-carboxylate dehydrogenase (RefSeq) 0.29 Dshi_3412 protein of unknown function DUF55 (RefSeq) low > 64
Marinobacter adhaerens HP15 0.37 HP15_2688 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.55 HP15_2975 protein belonging to uncharacterized protein family UPF0310 low > 73
Phaeobacter inhibens DSM 17395 0.36 PGA1_c11750 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) 0.38 PGA1_c35460 Uncharacterized conserved protein low > 62
Rhodospirillum rubrum S1H 0.36 Rru_A0656 delta-1-pyrroline-5-carboxylate dehydrogenase 3 (NCBI) 0.28 Rru_A3573 Protein of unknown function DUF589 (NCBI) — —

Not shown: 28 genomes with orthologs for Psyr_0506 only; 23 genomes with orthologs for Psyr_0315 only