Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas fluorescens GW456-L13 | 1.0 | PfGW456L13_5137 | | Transcriptional regulator, LysR family | 1.0 | PfGW456L13_1553 | | Carbonic anhydrase (EC 4.2.1.1) | 0.35 | 20 |
Pseudomonas fluorescens FW300-N1B4 | 0.94 | Pf1N1B4_1207 | | Transcriptional regulator, LysR family | 0.95 | Pf1N1B4_2893 | | Carbonic anhydrase (EC 4.2.1.1) | low | > 87 |
Pseudomonas fluorescens FW300-N2C3 | 0.90 | AO356_07805 | | LysR family transcriptional regulator | 0.92 | AO356_16270 | | carbonate dehydratase | low | > 104 |
Pseudomonas fluorescens FW300-N2E2 | 0.90 | Pf6N2E2_3445 | | Transcriptional regulator, LysR family | 0.92 | Pf6N2E2_5190 | | Carbonic anhydrase (EC 4.2.1.1) | low | > 103 |
Pseudomonas fluorescens FW300-N2E3 | 0.88 | AO353_05905 | | LysR family transcriptional regulator | 0.93 | AO353_14595 | | carbonate dehydratase | low | > 101 |
Pseudomonas sp. RS175 | 0.87 | PFR28_00026 | | HTH-type transcriptional regulator DmlR | 0.93 | PFR28_03679 | | Carbonic anhydrase 2 | low | > 88 |
Pseudomonas simiae WCS417 | 0.80 | PS417_23625 | | LysR family transcriptional regulator | 0.93 | PS417_03310 | | carbonate dehydratase | low | > 88 |
Pseudomonas fluorescens SBW25 | 0.78 | PFLU_RS25440 | | LysR family transcriptional regulator | 0.93 | PFLU_RS03405 | | carbonate dehydratase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.78 | PFLU_RS25440 | | LysR family transcriptional regulator | 0.93 | PFLU_RS03405 | | carbonate dehydratase | low | > 109 |
Dickeya dadantii 3937 | 0.55 | DDA3937_RS01770 | | LysR family transcriptional regulator | 0.56 | DDA3937_RS15980 | | carbonate dehydratase | — | — |
Pantoea sp. MT58 | 0.55 | IAI47_03165 | | LysR family transcriptional regulator | 0.56 | IAI47_15685 | | carbonate dehydratase | low | > 76 |
Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS11395 | | LysR family transcriptional regulator | 0.53 | RR42_RS00880 | | carbonate dehydratase | — | — |
Ralstonia sp. UNC404CL21Col | 0.54 | ABZR87_RS10585 | | LysR family transcriptional regulator | 0.57 | ABZR87_RS06310 | | carbonate dehydratase | low | > 80 |
Ralstonia solanacearum IBSBF1503 | 0.54 | RALBFv3_RS14925 | | LysR family transcriptional regulator | 0.56 | RALBFv3_RS10520 | | carbonate dehydratase | low | > 76 |
Ralstonia solanacearum UW163 | 0.54 | UW163_RS12395 | | LysR family transcriptional regulator | 0.56 | UW163_RS03060 | | carbonate dehydratase | — | — |
Pectobacterium carotovorum WPP14 | 0.54 | HER17_RS19795 | | LysR family transcriptional regulator | 0.56 | HER17_RS05535 | | carbonate dehydratase | — | — |
Ralstonia solanacearum GMI1000 | 0.54 | RS_RS05740 | | LysR family transcriptional regulator | 0.56 | RS_RS01360 | | carbonate dehydratase | low | > 80 |
Dickeya dianthicola 67-19 | 0.54 | HGI48_RS01665 | | LysR family transcriptional regulator | 0.56 | HGI48_RS16095 | | carbonate dehydratase | — | — |
Serratia liquefaciens MT49 | 0.52 | IAI46_21915 | | LysR family transcriptional regulator | 0.57 | IAI46_21270 | | carbonate dehydratase | low | > 86 |
Variovorax sp. SCN45 | 0.52 | GFF2787 | | Transcriptional regulator PA1859, LysR family | 0.51 | GFF1991 | | Carbonic anhydrase, beta class (EC 4.2.1.1) | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.51 | ABZR86_RS17240 | | LysR family transcriptional regulator | 0.57 | ABZR86_RS08905 | | carbonate dehydratase | low | > 74 |
Pseudomonas sp. S08-1 | 0.51 | OH686_12450 | | Transcriptional regulator, LysR family | 0.87 | OH686_08030 | | Carbonic anhydrase, beta class | low | > 80 |
Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_1990 | | Transcriptional regulator, LysR family | 0.49 | Ac3H11_2992 | | Carbonic anhydrase (EC 4.2.1.1) | low | > 79 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF2875 | | Transcriptional regulator, LysR family | 0.56 | GFF1724 | | Carbonic anhydrase (EC 4.2.1.1) | — | — |
Pseudomonas stutzeri RCH2 | 0.48 | Psest_0042 | | Transcriptional regulator | 0.85 | Psest_1062 | | Carbonic anhydrase | — | — |
Shewanella sp. ANA-3 | 0.47 | Shewana3_3598 | | LysR family transcriptional regulator (RefSeq) | 0.59 | Shewana3_1909 | | carbonic anhydrase (RefSeq) | low | > 73 |
Marinobacter adhaerens HP15 | 0.46 | HP15_2718 | | transcriptional regulator, LysR family protein | 0.51 | HP15_2268 | | carbonate dehydratase | low | > 73 |
Shewanella amazonensis SB2B | 0.46 | Sama_2389 | | LysR family transcriptional regulator (RefSeq) | 0.57 | Sama_1642 | | carbonate dehydratase (RefSeq) | low | > 62 |
Shewanella oneidensis MR-1 | 0.45 | SO2455 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.59 | SO2474 | | carbonic anhydrase family protein (NCBI ptt file) | low | > 76 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.43 | GFF4039 | | LysR family transcriptional regulator YafC | 0.53 | GFF102 | | Carbonic anhydrase (EC 4.2.1.1) | — | — |
Klebsiella michiganensis M5al | 0.43 | BWI76_RS05415 | | LysR family transcriptional regulator | 0.57 | BWI76_RS04960 | | carbonate dehydratase | low | > 92 |
Escherichia coli ECRC62 | 0.42 | BNILDI_09325 | yafC | DNA-binding transcriptional regulator YafC | 0.56 | BNILDI_08885 | can | carbonate dehydratase | — | — |
Escherichia coli BL21 | 0.42 | ECD_00201 | | LysR family putative transcriptional regulator | 0.56 | ECD_00125 | | carbonic anhydrase | — | — |
Escherichia coli ECOR38 | 0.42 | HEPCGN_07940 | yafC | DNA-binding transcriptional regulator YafC | 0.56 | HEPCGN_08420 | can | carbonate dehydratase | — | — |
Escherichia coli ECRC101 | 0.42 | MCAODC_00515 | yafC | DNA-binding transcriptional regulator YafC | 0.56 | MCAODC_00955 | can | carbonate dehydratase | — | — |
Escherichia coli ECRC102 | 0.42 | NIAGMN_07850 | yafC | DNA-binding transcriptional regulator YafC | 0.56 | NIAGMN_08290 | can | carbonate dehydratase | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.42 | OHPLBJKB_03453 | | HTH-type transcriptional regulator DmlR | 0.56 | OHPLBJKB_03535 | | Carbonic anhydrase 2 | — | — |
Escherichia coli BW25113 | 0.42 | b0208 | yafC | predicted DNA-binding transcriptional regulator (NCBI) | 0.56 | b0126 | can | carbonic anhydrase (NCBI) | — | — |
Escherichia coli ECRC99 | 0.42 | KEDOAH_18155 | yafC | DNA-binding transcriptional regulator YafC | 0.56 | KEDOAH_17715 | can | carbonate dehydratase | — | — |
Escherichia coli ECRC98 | 0.42 | JDDGAC_13595 | yafC | DNA-binding transcriptional regulator YafC | 0.56 | JDDGAC_14035 | can | carbonate dehydratase | — | — |
Escherichia coli ECOR27 | 0.42 | NOLOHH_02345 | yafC | DNA-binding transcriptional regulator YafC | 0.56 | NOLOHH_02785 | can | carbonate dehydratase | — | — |
Escherichia coli ECRC100 | 0.42 | OKFHMN_10000 | yafC | DNA-binding transcriptional regulator YafC | 0.56 | OKFHMN_10440 | can | carbonate dehydratase | — | — |
Rahnella sp. WP5 | 0.42 | EX31_RS21220 | | LysR family transcriptional regulator | 0.56 | EX31_RS03305 | | carbonate dehydratase | low | > 89 |
Enterobacter asburiae PDN3 | 0.42 | EX28DRAFT_2687 | | Transcriptional regulator | 0.57 | EX28DRAFT_3723 | | Carbonic anhydrase | low | > 76 |
Enterobacter sp. TBS_079 | 0.42 | MPMX20_00892 | | HTH-type transcriptional regulator DmlR | 0.57 | MPMX20_00820 | | Carbonic anhydrase 2 | low | > 85 |
Escherichia fergusonii Becca | 0.41 | EFB2_03835 | | HTH-type transcriptional regulator DmlR | 0.56 | EFB2_03919 | | Carbonic anhydrase 2 | — | — |
Escherichia coli Nissle 1917 | 0.41 | ECOLIN_RS01140 | | DNA-binding transcriptional regulator YafC | 0.56 | ECOLIN_RS00700 | | carbonate dehydratase | — | — |
Dickeya dianthicola ME23 | 0.29 | DZA65_RS14610 | | LysR family transcriptional regulator | 0.57 | DZA65_RS17180 | | carbonate dehydratase | — | — |
Not shown: 16 genomes with orthologs for PfGW456L13_5137 only; 20 genomes with orthologs for PfGW456L13_1553 only