Conservation of cofitness between Pf6N2E2_622 and Pf6N2E2_4416 in Pseudomonas fluorescens FW300-N2E2

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_622 BatA (Bacteroides aerotolerance operon) 1.0 Pf6N2E2_4416 Tyrosine recombinase XerC 0.32 13
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_24650 BatB protein 0.98 AO356_12725 recombinase XerC low > 104
Pseudomonas sp. RS175 0.85 PFR28_01592 hypothetical protein 0.98 PFR28_04378 Tyrosine recombinase XerC low > 88
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS17120 VWA domain-containing protein 0.86 PFLU_RS29280 tyrosine recombinase XerC low > 109
Pseudomonas fluorescens SBW25 0.78 PFLU_RS17120 VWA domain-containing protein 0.86 PFLU_RS29280 tyrosine recombinase XerC low > 109
Pseudomonas simiae WCS417 0.78 PS417_15100 BatB protein 0.86 PS417_27595 recombinase XerC low > 88
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_3303 BatA (Bacteroides aerotolerance operon) 0.96 PfGW456L13_842 Tyrosine recombinase XerC low > 87
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_4637 BatA (Bacteroides aerotolerance operon) 0.96 Pf1N1B4_2171 Tyrosine recombinase XerC — —
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_23720 BatB protein 0.92 AO353_09050 recombinase XerC low > 101
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_1718 von Willebrand factor, type A 0.85 Psyr_0185 tyrosine recombinase XerC subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_1718 von Willebrand factor, type A 0.85 Psyr_0185 tyrosine recombinase XerC subunit low > 86
Pseudomonas putida KT2440 0.71 PP_2029 von Willebrand factor type A domain protein 0.79 PP_5230 Tyrosine recombinase XerC low > 96
Pseudomonas stutzeri RCH2 0.64 Psest_1940 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 0.76 Psest_3767 tyrosine recombinase XerC low > 67
Pseudomonas sp. S08-1 0.59 OH686_22240 Aerotolerance protein BatA 0.75 OH686_13785 tyrosine recombinase XerC low > 80
Alteromonas macleodii MIT1002 0.39 MIT1002_01282 VWFA-related Acidobacterial domain protein 0.41 MIT1002_00157 Tyrosine recombinase XerC low > 70
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_1003 Mg-chelatase subunit ChlD 0.46 B158DRAFT_0244 tyrosine recombinase XerC subunit low > 40
Shewanella oneidensis MR-1 0.38 SO3093 von Willebrand factor type A domain protein (NCBI ptt file) 0.41 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_1456 von Willebrand factor, type A (RefSeq) 0.41 Shewana3_0393 tyrosine recombinase XerC (RefSeq) low > 73
Shewanella amazonensis SB2B 0.36 Sama_2172 von Willebrand factor type A domain-containing protein (RefSeq) 0.43 Sama_3247 integrase/recombinase XerC (RefSeq) low > 62
Marinobacter adhaerens HP15 0.35 HP15_2273 von Willebrand factor type A domain protein 0.47 HP15_250 site-specific tyrosine recombinase XerC low > 73
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_14850 VWA domain-containing protein 0.40 CSW01_00650 tyrosine recombinase XerC low > 62
Shewanella loihica PV-4 0.34 Shew_2430 von Willebrand factor, type A (RefSeq) 0.45 Shew_0325 tyrosine recombinase XerC (RefSeq) low > 60
Lysobacter sp. OAE881 0.32 ABIE51_RS17145 VWA domain-containing protein 0.45 ABIE51_RS03035 tyrosine recombinase XerC low > 62
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1185.1 BatA (Bacteroides aerotolerance operon) 0.47 Xcc-8004.847.1 Site-specific tyrosine recombinase — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS11770 VWA domain-containing protein 0.49 ABZR86_RS15025 tyrosine recombinase XerC low > 74
Rhodanobacter denitrificans MT42 0.29 LRK55_RS11600 VWA domain-containing protein 0.46 LRK55_RS08300 tyrosine recombinase XerC low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS11875 VWA domain-containing protein 0.46 LRK54_RS08535 tyrosine recombinase XerC low > 59
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_12020 chlD BatB protein 0.48 OKGIIK_15325 xerC tyrosine recombinase XerC — —
Dinoroseobacter shibae DFL-12 0.27 Dshi_3116 von Willebrand factor type A (RefSeq) 0.28 Dshi_5002 xerC hypothetical protein (NCBI) — —
Azospirillum brasilense Sp245 0.24 AZOBR_RS24375 membrane protein 0.28 AZOBR_RS03965 tyrosine recombinase XerC — —
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS04065 VWA domain-containing protein 0.29 HMPREF1058_RS09445 tyrosine-type recombinase/integrase low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.12 GFF3386 BatA (Bacteroides aerotolerance operon) 0.39 GFF547 Tyrosine recombinase XerC low > 90
Variovorax sp. SCN45 0.11 GFF6084 Aerotolerance protein BatA 0.36 GFF4490 Site-specific tyrosine recombinase XerC low > 127

Not shown: 4 genomes with orthologs for Pf6N2E2_622 only; 55 genomes with orthologs for Pf6N2E2_4416 only