Conservation of cofitness between Pf6N2E2_2479 and Pf6N2E2_2845 in Pseudomonas fluorescens FW300-N2E2

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_2479 Transcription elongation factor GreB 1.0 Pf6N2E2_2845 RNA polymerase associated protein RapA (EC 3.6.1.-) 0.23 11
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_03240 transcription elongation factor GreB 0.99 AO356_04975 RNA polymerase-associated protein RapA 0.28 91
Pseudomonas sp. RS175 0.97 PFR28_00955 Transcription elongation factor GreB 0.98 PFR28_00612 RNA polymerase-associated protein RapA low > 88
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_2216 Transcription elongation factor GreB 0.97 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_18990 transcription elongation factor GreB 0.97 AO353_17155 RNA polymerase-associated protein RapA low > 101
Pseudomonas stutzeri RCH2 0.88 Psest_2339 transcription elongation factor GreB 0.86 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family low > 67
Pseudomonas sp. S08-1 0.86 OH686_01805 transcription elongation factor GreB 0.86 OH686_19955 RNA polymerase associated protein RapA low > 80
Marinobacter adhaerens HP15 0.60 HP15_3481 transcription elongation factor GreB 0.42 HP15_3376 RNA polymerase-associated protein RapA low > 73
Shewanella sp. ANA-3 0.54 Shewana3_4014 transcription elongation factor GreB (RefSeq) 0.48 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) low > 73
Shewanella loihica PV-4 0.53 Shew_3636 transcription elongation factor GreB (RefSeq) 0.47 Shew_0457 ATP-dependent helicase HepA (RefSeq) low > 60
Shewanella oneidensis MR-1 0.53 SO4631 greB transcription elongation factor GreB (NCBI ptt file) 0.48 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.53 Sama_3509 GreA/GreB family elongation factor (RefSeq) 0.46 Sama_3131 ATP-dependent helicase HepA (RefSeq) low > 62
Dickeya dadantii 3937 0.50 DDA3937_RS19625 transcription elongation factor GreB 0.49 DDA3937_RS18235 RNA polymerase-associated protein RapA low > 74
Pseudomonas putida KT2440 0.49 PP_2315 Transcription elongation factor GreB 0.91 PP_1145 RNA polymerase-associated protein RapA low > 96
Dickeya dianthicola ME23 0.48 DZA65_RS20845 transcription elongation factor GreB 0.49 DZA65_RS19310 RNA polymerase-associated protein RapA low > 75
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_04765 greB transcription elongation factor GreB 0.33 OKGIIK_09865 rapA RNA polymerase-associated protein RapA low > 52
Dickeya dianthicola 67-19 0.48 HGI48_RS19755 transcription elongation factor GreB 0.49 HGI48_RS18170 RNA polymerase-associated protein RapA low > 71
Pseudomonas simiae WCS417 0.48 PS417_08390 transcription elongation factor GreB 0.95 PS417_06645 RNA polymerase-associated protein RapA low > 88
Rhodanobacter denitrificans MT42 0.48 LRK55_RS01545 transcription elongation factor GreB 0.33 LRK55_RS02635 RNA polymerase-associated protein RapA low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS01765 transcription elongation factor GreB 0.33 LRK54_RS02885 RNA polymerase-associated protein RapA low > 59
Pectobacterium carotovorum WPP14 0.48 HER17_RS01650 transcription elongation factor GreB 0.49 HER17_RS02990 RNA polymerase-associated protein RapA low > 75
Enterobacter sp. TBS_079 0.48 MPMX20_04293 Transcription elongation factor GreB 0.49 MPMX20_00753 RNA polymerase-associated protein RapA low > 85
Serratia liquefaciens MT49 0.47 IAI46_23795 transcription elongation factor GreB 0.49 IAI46_03275 RNA polymerase-associated protein RapA low > 86
Acinetobacter radioresistens SK82 0.47 MPMX26_00813 Transcription elongation factor GreB 0.39 MPMX26_01027 RNA polymerase-associated protein RapA — —
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS08080 transcription elongation factor GreB 0.33 ABZR86_RS09245 RNA polymerase-associated protein RapA low > 74
Pseudomonas fluorescens SBW25 0.47 PFLU_RS08340 transcription elongation factor GreB 0.96 PFLU_RS06675 RNA polymerase-associated protein RapA low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS08340 transcription elongation factor GreB 0.96 PFLU_RS06675 RNA polymerase-associated protein RapA low > 109
Enterobacter asburiae PDN3 0.47 EX28DRAFT_4137 transcription elongation factor GreB 0.49 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family low > 76
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_13700 transcription elongation factor GreB 0.48 CSW01_12705 RNA polymerase-associated protein RapA low > 62
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_298 Transcription elongation factor GreB 0.97 Pf1N1B4_3224 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 87
Pantoea sp. MT58 0.47 IAI47_01810 transcription elongation factor GreB 0.48 IAI47_16055 RNA polymerase-associated protein RapA low > 76
Escherichia coli ECRC98 0.46 JDDGAC_20660 greB transcription elongation factor GreB 0.50 JDDGAC_14395 rapA RNA polymerase-associated protein RapA low > 86
Escherichia coli BW25113 0.46 b3406 greB transcription elongation factor GreB (NCBI) 0.50 b0059 hepA ATP-dependent helicase HepA (NCBI) low > 76
Escherichia fergusonii Becca 0.46 EFB2_00422 Transcription elongation factor GreB 0.50 EFB2_03986 RNA polymerase-associated protein RapA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00297 Transcription elongation factor GreB 0.49 OHPLBJKB_03599 RNA polymerase-associated protein RapA 0.67 4
Escherichia coli ECRC99 0.46 KEDOAH_11110 greB transcription elongation factor GreB 0.50 KEDOAH_17355 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC100 0.46 OKFHMN_17030 greB transcription elongation factor GreB 0.50 OKFHMN_10800 rapA RNA polymerase-associated protein RapA low > 80
Escherichia coli ECOR38 0.46 HEPCGN_15840 greB transcription elongation factor GreB 0.50 HEPCGN_08790 rapA RNA polymerase-associated protein RapA low > 87
Escherichia coli BL21 0.46 ECD_03258 transcript cleavage factor 0.50 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase low > 61
Rahnella sp. WP5 0.46 EX31_RS04835 transcription elongation factor GreB 0.49 EX31_RS03745 RNA polymerase-associated protein RapA low > 89
Escherichia coli ECRC62 0.46 BNILDI_02700 greB transcription elongation factor GreB 0.50 BNILDI_08460 rapA RNA polymerase-associated protein RapA low > 75
Escherichia coli ECRC101 0.46 MCAODC_07560 greB transcription elongation factor GreB 0.50 MCAODC_01315 rapA RNA polymerase-associated protein RapA low > 87
Escherichia coli ECOR27 0.46 NOLOHH_08820 greB transcription elongation factor GreB 0.50 NOLOHH_03145 rapA RNA polymerase-associated protein RapA low > 75
Escherichia coli Nissle 1917 0.46 ECOLIN_RS19460 transcription elongation factor GreB 0.50 ECOLIN_RS00315 RNA polymerase-associated protein RapA low > 55
Escherichia coli ECRC102 0.46 NIAGMN_14800 greB transcription elongation factor GreB 0.50 NIAGMN_08650 rapA RNA polymerase-associated protein RapA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2065 transcription elongation factor GreB 0.94 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit low > 86
Erwinia tracheiphila SCR3 0.46 LU632_RS22950 greB transcription elongation factor GreB 0.49 LU632_RS02805 rapA RNA polymerase-associated protein RapA low > 74
Klebsiella michiganensis M5al 0.46 BWI76_RS26660 transcription elongation factor GreB 0.49 BWI76_RS04570 RNA polymerase-associated protein RapA low > 92
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2065 transcription elongation factor GreB 0.94 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF612 Transcription elongation factor GreB 0.49 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 78
Alteromonas macleodii MIT1002 0.45 MIT1002_04011 Transcript cleavage factor GreB 0.42 MIT1002_00659 RNA polymerase-associated protein RapA low > 70

Not shown: 21 genomes with orthologs for Pf6N2E2_2479 only; 0 genomes with orthologs for Pf6N2E2_2845 only