| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N1B4 | 1.0 | Pf1N1B4_1185 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 1.0 | Pf1N1B4_3884 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | 0.61 | 4 |
| Pseudomonas fluorescens GW456-L13 | 0.98 | PfGW456L13_5113 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.97 | PfGW456L13_4056 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.95 | AO353_05695 | | transcriptional regulator PdhR | 0.93 | AO353_00585 | | cytochrome C oxidase Cbb3 | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.95 | AO356_07545 | | transcriptional regulator PdhR | 0.95 | AO356_02405 | | cytochrome C oxidase Cbb3 | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.94 | Pf6N2E2_3379 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.95 | Pf6N2E2_2305 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | 0.23 | 66 |
| Pseudomonas fluorescens SBW25-INTG | 0.94 | PFLU_RS25940 | | FCD domain-containing protein | 0.96 | PFLU_RS22320 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.94 | PFLU_RS25940 | | FCD domain-containing protein | 0.96 | PFLU_RS22320 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 109 |
| Pseudomonas sp. RS175 | 0.93 | PFR28_00064 | | Pyruvate dehydrogenase complex repressor | 0.95 | PFR28_01095 | | Cbb3-type cytochrome c oxidase subunit CcoN1 | low | > 88 |
| Pseudomonas simiae WCS417 | 0.89 | PS417_24100 | | transcriptional regulator PdhR | 0.96 | PS417_20700 | | cbb3-type cytochrome c oxidase subunit I | low | > 88 |
| Pseudomonas putida KT2440 | 0.86 | PP_4734 | | DNA-binding transcriptional dual regulator, LldR-L-lactate | 0.92 | PP_4250 | | cytochrome c oxidase subunit I, cbb3-type | low | > 96 |
| Pseudomonas sp. S08-1 | 0.79 | OH686_17020 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.91 | OH686_02175 | | cytochrome c oxidase, cbb3-type, subunit I | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.79 | Psest_0956 | | Transcriptional regulators | 0.92 | Psest_2524 | | cytochrome c oxidase, cbb3-type, subunit I | low | > 67 |
| Marinobacter adhaerens HP15 | 0.64 | HP15_4087 | | transcriptional regulator, GntR family | 0.79 | HP15_2107 | | cytochrome c oxidase, cbb3-type, subunit I | — | — |
| Shewanella sp. ANA-3 | 0.42 | Shewana3_0425 | pdhR | transcriptional regulator PdhR (RefSeq) | 0.80 | Shewana3_2107 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.42 | SO0423 | pdhR | pyruvate dehydrogenase complex repressor (NCBI ptt file) | 0.80 | SO2364 | ccoN | cytochrome c oxidase, cbb3-type, subunit I (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.41 | Sama_0374 | pdhR | transcriptional regulator PdhR (RefSeq) | 0.79 | Sama_1791 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.41 | Shew_3432 | pdhR | transcriptional regulator PdhR (RefSeq) | 0.79 | Shew_1985 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.40 | CSW01_12225 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.78 | CSW01_07230 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 62 |
| Magnetospirillum magneticum AMB-1 | 0.39 | AMB_RS01210 | | FCD domain-containing protein | 0.62 | AMB_RS22070 | | cytochrome-c oxidase, cbb3-type subunit I | — | — |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_3026 | | GntR domain protein (RefSeq) | 0.62 | Dshi_0661 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | low | > 64 |
| Alteromonas macleodii MIT1002 | 0.35 | MIT1002_03004 | | Pyruvate dehydrogenase complex repressor | 0.79 | MIT1002_02129 | | hypothetical protein | low | > 70 |
| Castellaniella sp019104865 MT123 | 0.35 | ABCV34_RS10290 | | transcriptional regulator LldR | 0.75 | ABCV34_RS06870 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 48 |
| Phaeobacter inhibens DSM 17395 | 0.34 | PGA1_c00760 | | putative pyruvate dehydrogenase complex repressor | 0.63 | PGA1_c30120 | | cytochrome c oxidase subunit 1 | 0.24 | 6 |
| Sinorhizobium meliloti 1021 | 0.34 | SMc00829 | | transcriptional regulator | 0.62 | SMa1220 | | cbb3-type cytochrome c oxidase subunit I | 0.26 | 71 |
| Azospirillum sp. SherDot2 | 0.32 | MPMX19_06090 | | Pyruvate dehydrogenase complex repressor | 0.65 | MPMX19_00206 | | Cytochrome c oxidase subunit 1, bacteroid | low | > 112 |
| Agrobacterium fabrum C58 | 0.31 | Atu0662 | | transcriptional regulator, GntR family | 0.62 | Atu1537 | | cytochrome-c oxidase, FixN chain | low | > 89 |
| Cupriavidus basilensis FW507-4G11 | 0.30 | RR42_RS21300 | | GntR family transcriptional regulator | 0.77 | RR42_RS12910 | | cbb3-type cytochrome c oxidase subunit I | low | > 128 |
| Rhodospirillum rubrum S1H | 0.26 | Rru_A1414 | | regulatory protein GntR (NCBI) | 0.63 | Rru_A3332 | | Cytochrome c oxidase cbb3-type, subunit I (NCBI) | — | — |
| Azospirillum brasilense Sp245 | 0.25 | AZOBR_RS25130 | | GntR family transcriptional regulator | 0.65 | AZOBR_RS01180 | | peptidase S41 | low | > 97 |
| Variovorax sp. OAS795 | 0.19 | ABID97_RS05820 | | FadR/GntR family transcriptional regulator | 0.75 | ABID97_RS16225 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 91 |
| Caulobacter crescentus NA1000 Δfur | 0.19 | CCNA_01037 | | GntR-family transcriptional regulator | 0.60 | CCNA_01467 | | cytochrome cbb3 oxidase subunit I ccoN | low | > 67 |
| Caulobacter crescentus NA1000 | 0.19 | CCNA_01037 | | GntR-family transcriptional regulator | 0.60 | CCNA_01467 | | cytochrome cbb3 oxidase subunit I ccoN | low | > 66 |
| Herbaspirillum seropedicae SmR1 | 0.19 | HSERO_RS20270 | | transcription regulator protein | 0.75 | HSERO_RS16055 | | cytochrome oxidase subunit I | — | — |
| Rhizobium sp. OAE497 | 0.18 | ABIE40_RS25825 | | FadR/GntR family transcriptional regulator | 0.64 | ABIE40_RS26170 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 107 |
| Bosea sp. OAE506 | 0.15 | ABIE41_RS23680 | | FCD domain-containing protein | 0.62 | ABIE41_RS10565 | | cytochrome-c oxidase, cbb3-type subunit I | low | > 77 |
Not shown: 33 genomes with orthologs for Pf1N1B4_1185 only; 16 genomes with orthologs for Pf1N1B4_3884 only