| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4129 | | NADH:ubiquinone oxidoreductase, membrane subunit L | 1.0 | PP_5352 | | DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex | 0.42 | 18 |
| Pseudomonas sp. RS175 | 0.93 | PFR28_02637 | | NADH-quinone oxidoreductase subunit L | 0.87 | PFR28_04523 | | DNA helicase II | — | — |
| Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS18665 | | NADH-quinone oxidoreductase subunit L | 0.86 | PFLU_RS29900 | | DNA helicase II | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS18665 | | NADH-quinone oxidoreductase subunit L | 0.86 | PFLU_RS29900 | | DNA helicase II | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_27790 | | NADH-quinone oxidoreductase subunit L | 0.88 | AO353_10055 | | DNA helicase II | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_2623 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.87 | PfGW456L13_724 | | ATP-dependent DNA helicase UvrD/PcrA | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.90 | AO356_22020 | | NADH-quinone oxidoreductase subunit L | 0.87 | AO356_11990 | | DNA helicase II | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.89 | Pf6N2E2_267 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.87 | Pf6N2E2_4273 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.88 | Pf1N1B4_4030 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.86 | Pf1N1B4_2005 | | ATP-dependent DNA helicase UvrD/PcrA | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.87 | Psyr_3207 | | NADH dehydrogenase subunit L | 0.86 | Psyr_5065 | | ATP-dependent DNA helicase UvrD | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.87 | Psyr_3207 | | NADH dehydrogenase subunit L | 0.86 | Psyr_5065 | | ATP-dependent DNA helicase UvrD | — | — |
| Pseudomonas sp. S08-1 | 0.76 | OH686_00105 | | NADH-ubiquinone oxidoreductase chain L | 0.80 | OH686_13045 | | ATP-dependent DNA helicase UvrD/PcrA | low | > 80 |
| Shewanella oneidensis MR-1 | 0.69 | SO1011 | nuoL | NADH dehydrogenase I, L subunit (NCBI ptt file) | 0.61 | SO0467 | uvrD | DNA helicase II (NCBI ptt file) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.67 | HER17_RS07175 | | NADH-quinone oxidoreductase subunit L | 0.63 | HER17_RS01360 | | DNA helicase II | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.67 | GFF1881 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.63 | GFF241 | | ATP-dependent DNA helicase UvrD/PcrA | low | > 78 |
| Pantoea sp. MT58 | 0.67 | IAI47_06410 | | NADH-quinone oxidoreductase subunit L | 0.61 | IAI47_18390 | | DNA helicase II | low | > 76 |
| Escherichia coli ECOR27 | 0.67 | NOLOHH_14510 | nuoL | NADH-quinone oxidoreductase subunit L | 0.63 | NOLOHH_06540 | uvrD | DNA helicase II | low | > 57 |
| Erwinia tracheiphila SCR3 | 0.67 | LU632_RS08015 | nuoL | NADH-quinone oxidoreductase subunit L | 0.61 | LU632_RS24125 | uvrD | DNA helicase II | — | — |
| Escherichia coli BL21 | 0.67 | ECD_02203 | | NADH:ubiquinone oxidoreductase, membrane subunit L | 0.63 | ECD_03689 | | DNA-dependent ATPase I and helicase II | — | — |
| Enterobacter sp. TBS_079 | 0.67 | MPMX20_03208 | | NADH-quinone oxidoreductase subunit L | 0.63 | MPMX20_04463 | | DNA helicase II | low | > 85 |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_0332 | | proton-translocating NADH-quinone oxidoreductase, chain L | 0.63 | EX28DRAFT_4482 | | ATP-dependent DNA helicase UvrD (EC 3.6.1.-) | low | > 76 |
| Escherichia fergusonii Becca | 0.67 | EFB2_01581 | | NADH-quinone oxidoreductase subunit L | 0.63 | EFB2_04824 | | DNA helicase II | low | > 86 |
| Escherichia coli Nissle 1917 | 0.67 | ECOLIN_RS13235 | | NADH-quinone oxidoreductase subunit L | 0.63 | ECOLIN_RS21885 | | DNA helicase II | low | > 52 |
| Escherichia coli ECOR38 | 0.67 | HEPCGN_22095 | nuoL | NADH-quinone oxidoreductase subunit L | 0.63 | HEPCGN_13115 | uvrD | DNA helicase II | low | > 85 |
| Escherichia coli ECRC99 | 0.67 | KEDOAH_05305 | nuoL | NADH-quinone oxidoreductase subunit L | 0.63 | KEDOAH_13740 | uvrD | DNA helicase II | — | — |
| Escherichia coli ECRC102 | 0.67 | NIAGMN_20660 | nuoL | NADH-quinone oxidoreductase subunit L | 0.63 | NIAGMN_12165 | uvrD | DNA helicase II | — | — |
| Escherichia coli ECRC98 | 0.67 | JDDGAC_26855 | nuoL | NADH-quinone oxidoreductase subunit L | 0.63 | JDDGAC_18035 | uvrD | DNA helicase II | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_01428 | | NADH-quinone oxidoreductase subunit L | 0.63 | OHPLBJKB_04237 | | DNA helicase II | 0.41 | 21 |
| Escherichia coli ECRC101 | 0.67 | OKFHMN_22890 | nuoL | NADH-quinone oxidoreductase subunit L | 0.63 | OKFHMN_14410 | uvrD | DNA helicase II | — | — |
| Escherichia coli ECRC101 | 0.67 | MCAODC_13930 | nuoL | NADH-quinone oxidoreductase subunit L | 0.63 | MCAODC_04915 | uvrD | DNA helicase II | — | — |
| Escherichia coli BW25113 | 0.67 | b2278 | nuoL | NADH dehydrogenase subunit L (NCBI) | 0.63 | b3813 | uvrD | DNA-dependent ATPase I and helicase II (NCBI) | low | > 76 |
| Rahnella sp. WP5 | 0.67 | EX31_RS19385 | | NADH-quinone oxidoreductase subunit L | 0.62 | EX31_RS15175 | | DNA helicase II | low | > 89 |
| Escherichia coli ECRC62 | 0.67 | BNILDI_13430 | nuoL | NADH-quinone oxidoreductase subunit L | 0.63 | BNILDI_04995 | uvrD | DNA helicase II | — | — |
| Serratia liquefaciens MT49 | 0.66 | IAI46_17660 | | NADH-quinone oxidoreductase subunit L | 0.63 | IAI46_00735 | | DNA helicase II | low | > 86 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS20140 | | NADH-quinone oxidoreductase subunit L | 0.63 | BWI76_RS01220 | | DNA-dependent helicase II | 0.32 | 86 |
| Dickeya dianthicola ME23 | 0.65 | DZA65_RS14935 | | NADH-quinone oxidoreductase subunit L | 0.63 | DZA65_RS21080 | | DNA helicase II | — | — |
| Dickeya dadantii 3937 | 0.65 | DDA3937_RS14285 | | NADH-quinone oxidoreductase subunit L | 0.63 | DDA3937_RS19880 | | DNA helicase II | — | — |
| Dickeya dianthicola 67-19 | 0.65 | HGI48_RS14260 | | NADH-quinone oxidoreductase subunit L | 0.62 | HGI48_RS20035 | | DNA helicase II | low | > 71 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.45 | CA264_04220 | | NADH-quinone oxidoreductase subunit L | 0.32 | CA264_07795 | | ATP-dependent DNA helicase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.32 | CA265_RS23590 | | NADH-quinone oxidoreductase subunit L | 0.32 | CA265_RS12980 | | ATP-dependent DNA helicase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.31 | ABZR88_RS17115 | | NADH-quinone oxidoreductase subunit L | 0.32 | ABZR88_RS07840 | | ATP-dependent helicase | — | — |
| Azospirillum brasilense Sp245 | 0.29 | AZOBR_RS07220 | | NADH:ubiquinone oxidoreductase subunit L | 0.37 | AZOBR_RS12445 | | DNA helicase II | — | — |
| Azospirillum sp. SherDot2 | 0.29 | MPMX19_01735 | | NADH-quinone oxidoreductase subunit L | 0.36 | MPMX19_01610 | | ATP-dependent DNA helicase PcrA | — | — |
| Magnetospirillum magneticum AMB-1 | 0.29 | AMB_RS13955 | | NADH-quinone oxidoreductase subunit L | 0.33 | AMB_RS03725 | | DNA helicase II | — | — |
| Variovorax sp. OAS795 | 0.28 | ABID97_RS20440 | | NADH-quinone oxidoreductase subunit L | 0.45 | ABID97_RS09150 | | UvrD-helicase domain-containing protein | — | — |
| Rhodospirillum rubrum S1H | 0.28 | Rru_A1566 | | NADH-plastoquinone oxidoreductase, chain 5 (NCBI) | 0.34 | Rru_A1536 | | UvrD/REP helicase (NCBI) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.28 | Dshi_1327 | | proton-translocating NADH-quinone oxidoreductase, chain L (RefSeq) | 0.34 | Dshi_2483 | | UvrD/REP helicase (RefSeq) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_0698 | | NADH dehydrogenase subunit L (EC 1.6.5.3) | 0.36 | Ga0059261_0249 | | Superfamily I DNA and RNA helicases | — | — |
| Mycobacterium tuberculosis H37Rv | 0.25 | Rv3156 | | Probable NADH dehydrogenase I (chain L) NuoL (NADH-ubiquinone oxidoreductase chain L) | 0.33 | Rv0949 | | Probable ATP-dependent DNA helicase II UvrD1 | low | > 58 |
| Bosea sp. OAE506 | 0.25 | ABIE41_RS17885 | | NADH-quinone oxidoreductase subunit L | 0.36 | ABIE41_RS12730 | | UvrD-helicase domain-containing protein | — | — |
| Bacteroides stercoris CC31F | 0.24 | HMPREF1181_RS09035 | | NADH-quinone oxidoreductase subunit L | 0.32 | HMPREF1181_RS16505 | | UvrD-helicase domain-containing protein | low | > 56 |
| Bacteroides ovatus ATCC 8483 | 0.24 | BACOVA_04855 | | proton-translocating NADH-quinone oxidoreductase, chain L | 0.32 | BACOVA_02365 | | UvrD/REP helicase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.23 | BT4060 | | NADH dehydrogenase I, chain L (NCBI ptt file) | 0.32 | BT0657 | | ATP-dependent DNA helicase (NCBI ptt file) | — | — |
| Synechococcus elongatus PCC 7942 | 0.23 | Synpcc7942_1977 | ndhF1 | NAD(P)H-quinone oxidoreductase subunit F | 0.30 | Synpcc7942_2168 | pcrA | ATP-dependent DNA helicase, Rep family | low | > 38 |
| Phocaeicola vulgatus CL09T03C04 | 0.23 | HMPREF1058_RS13300 | | NADH-quinone oxidoreductase subunit L | 0.31 | HMPREF1058_RS03305 | | UvrD-helicase domain-containing protein | 0.47 | 20 |
| Phocaeicola dorei CL03T12C01 | 0.23 | ABI39_RS08505 | | NADH-quinone oxidoreductase subunit L | 0.31 | ABI39_RS17735 | | UvrD-helicase domain-containing protein | — | — |
Not shown: 4 genomes with orthologs for PP_4129 only; 36 genomes with orthologs for PP_5352 only