Conservation of cofitness between PP_1426 and PP_5348 in Pseudomonas putida KT2440

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1426 L-aspartate oxidase 1.0 PP_5348 Transcriptional regulator, LysR family 0.45 19
Pseudomonas fluorescens SBW25 0.90 PFLU_RS07225 L-aspartate oxidase 0.84 PFLU_RS29885 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS07225 L-aspartate oxidase 0.84 PFLU_RS29885 LysR family transcriptional regulator 0.42 17
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_17620 L-aspartate oxidase 0.87 AO353_10035 LysR family transcriptional regulator low > 101
Pseudomonas simiae WCS417 0.90 PS417_07115 L-aspartate oxidase 0.84 PS417_28220 LysR family transcriptional regulator 0.33 51
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) 0.84 PfGW456L13_727 LysR family transcriptional regulator PA5437 low > 87
Pseudomonas sp. RS175 0.89 PFR28_00689 L-aspartate oxidase 0.86 PFR28_04519 HTH-type transcriptional activator CmpR low > 88
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) 0.85 Pf1N1B4_2009 LysR family transcriptional regulator PA5437 low > 87
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_3959 L-aspartate oxidase 0.80 Psyr_5062 transcriptional regulator, LysR family 0.53 37
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_3959 L-aspartate oxidase 0.80 Psyr_5062 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_04580 L-aspartate oxidase 0.85 AO356_12015 LysR family transcriptional regulator low > 104
Pseudomonas sp. S08-1 0.87 OH686_20040 L-aspartate oxidase 0.71 OH686_13195 Transcriptional regulator, LysR family low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_3101 L-aspartate oxidase 0.74 Psest_4086 Transcriptional regulator low > 67
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) 0.83 Pf6N2E2_4277 LysR family transcriptional regulator PA5437 0.29 29
Shewanella amazonensis SB2B 0.67 Sama_0873 L-aspartate oxidase (RefSeq) 0.24 Sama_0693 RuBisCo operon transcriptional regulator (RefSeq) — —
Shewanella oneidensis MR-1 0.66 SO1341 nadB L-aspartate oxidase (NCBI ptt file) 0.23 SO3757 rbcR rubisco operon transcriptional regulator (NCBI ptt file) 0.44 24
Shewanella sp. ANA-3 0.66 Shewana3_3033 L-aspartate oxidase (RefSeq) 0.22 Shewana3_0835 LysR family transcriptional regulator (RefSeq) — —
Shewanella loihica PV-4 0.66 Shew_1047 L-aspartate oxidase (RefSeq) 0.33 Shew_1245 LysR family transcriptional regulator (RefSeq) — —
Paraburkholderia graminis OAS925 0.65 ABIE53_003292 L-aspartate oxidase 0.34 ABIE53_005077 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS03070 L-aspartate oxidase 0.33 QEN71_RS20425 LysR family transcriptional regulator low > 153
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_04069 L-aspartate oxidase 0.35 H281DRAFT_03013 transcriptional regulator, LysR family low > 103
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS17010 L-aspartate oxidase 0.33 RR42_RS31340 transcriptional regulator low > 128
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS15640 L-aspartate oxidase 0.34 BPHYT_RS29890 LysR family transcriptional regulator low > 109
Dechlorosoma suillum PS 0.64 Dsui_2452 L-aspartate oxidase 0.30 Dsui_2869 transcriptional regulator — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF1214 L-aspartate oxidase (EC 1.4.3.16) 0.32 GFF2192 Cys regulon transcriptional activator CysB low > 90
Variovorax sp. OAS795 0.59 ABID97_RS07440 L-aspartate oxidase 0.31 ABID97_RS24450 LysR family transcriptional regulator low > 91
Acidovorax sp. GW101-3H11 0.57 Ac3H11_3824 L-aspartate oxidase (EC 1.4.3.16) 0.31 Ac3H11_3174 RuBisCO operon transcriptional regulator low > 79
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_1881 nadB L-aspartate oxidase 0.38 Synpcc7942_1310 cmpR ndhF3 operon transcriptional regulator — —
Sinorhizobium meliloti 1021 0.29 SMc02599 L-aspartate oxidase 0.25 SM_b20203 transcriptional regulator — —
Azospirillum sp. SherDot2 0.26 MPMX19_05671 L-aspartate oxidase 0.28 MPMX19_02949 HTH-type transcriptional activator CmpR low > 112
Rhodospirillum rubrum S1H 0.25 Rru_A1433 L-aspartate oxidase (NCBI) 0.33 Rru_A2401 RuBisCO transcriptional regulator cbbR, LysR family (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.25 TX73_005420 L-aspartate oxidase 0.25 TX73_007990 LysR family transcriptional regulator — —

Not shown: 60 genomes with orthologs for PP_1426 only; 0 genomes with orthologs for PP_5348 only