Conservation of cofitness between PP_1988 and PP_5098 in Pseudomonas putida KT2440

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1988 3-isopropylmalate dehydrogenase 1.0 PP_5098 methionine biosynthesis protein MetW 0.89 16
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.84 Pf6N2E2_4596 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.94 6
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_21415 3-isopropylmalate dehydrogenase 0.84 AO356_13405 methionine biosynthesis protein MetW 0.96 6
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.85 PfGW456L13_1006 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.95 7
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.84 PFLU_RS28390 methionine biosynthesis protein MetW 0.89 5
Pseudomonas fluorescens SBW25 0.93 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.84 PFLU_RS28390 methionine biosynthesis protein MetW 0.84 8
Pseudomonas simiae WCS417 0.93 PS417_18585 3-isopropylmalate dehydrogenase 0.85 PS417_26745 methionine biosynthesis protein MetW 0.93 6
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.84 Pf1N1B4_2337 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.90 7
Pseudomonas sp. RS175 0.93 PFR28_02821 3-isopropylmalate dehydrogenase 0.85 PFR28_04246 Bifunctional methionine biosynthesis protein MetXA/MetW 0.44 33
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_20635 3-isopropylmalate dehydrogenase 0.86 AO353_08185 methionine biosynthesis protein MetW 0.98 2
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_1985 3-isopropylmalate dehydrogenase 0.84 Psyr_0473 Methionine biosynthesis MetW 0.94 5
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_1985 3-isopropylmalate dehydrogenase 0.84 Psyr_0473 Methionine biosynthesis MetW 0.94 7
Pseudomonas stutzeri RCH2 0.87 Psest_2589 3-isopropylmalate dehydrogenase 0.78 Psest_0279 methionine biosynthesis protein MetW 0.94 4
Pseudomonas sp. S08-1 0.87 OH686_04470 3-isopropylmalate dehydrogenase 0.77 OH686_11005 methionine biosynthesis protein MetW low > 80
Acinetobacter radioresistens SK82 0.73 MPMX26_00348 3-isopropylmalate dehydrogenase 0.54 MPMX26_00402 Bifunctional methionine biosynthesis protein MetXA/MetW low > 36
Marinobacter adhaerens HP15 0.73 HP15_1832 3-isopropylmalate dehydrogenase 0.57 HP15_283 methionine biosynthesis protein MetW 0.82 18
Dechlorosoma suillum PS 0.68 Dsui_3198 3-isopropylmalate dehydrogenase 0.37 Dsui_0740 methionine biosynthesis protein MetW — —
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.36 H281DRAFT_02215 methionine biosynthesis protein MetW 0.75 4
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.39 ABZR87_RS05205 methionine biosynthesis protein MetW low > 80
Paraburkholderia graminis OAS925 0.65 ABIE53_004804 3-isopropylmalate dehydrogenase 0.36 ABIE53_000413 methionine biosynthesis protein MetW 0.66 23
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.37 HSERO_RS00460 methionine biosynthesis protein MetW low > 78
Variovorax sp. OAS795 0.64 ABID97_RS08455 3-isopropylmalate dehydrogenase 0.35 ABID97_RS02595 methionine biosynthesis protein MetW — —
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS14385 3-isopropylmalate dehydrogenase 0.41 RR42_RS01165 methionine biosynthesis protein MetW low > 128
Ralstonia solanacearum GMI1000 0.64 RS_RS09990 3-isopropylmalate dehydrogenase 0.38 RS_RS00130 methionine biosynthesis protein MetW low > 80
Ralstonia solanacearum UW163 0.64 UW163_RS11115 3-isopropylmalate dehydrogenase 0.41 UW163_RS04050 methionine biosynthesis protein MetW — —
Variovorax sp. SCN45 0.64 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.35 GFF3264 Methionine biosynthesis protein MetW low > 127
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.41 RALBFv3_RS09530 methionine biosynthesis protein MetW 0.45 47
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.35 BPHYT_RS01590 methionine biosynthesis protein MetW 0.79 50
Acidovorax sp. GW101-3H11 0.64 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.36 Ac3H11_4278 Methionine biosynthesis protein MetW 0.95 5
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.36 QEN71_RS00285 methionine biosynthesis protein MetW low > 153
Ralstonia solanacearum PSI07 0.63 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.39 RPSI07_RS23820 methionine biosynthesis protein MetW 0.55 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.37 GFF2448 Methionine biosynthesis protein MetW low > 90
Azospirillum sp. SherDot2 0.57 MPMX19_00607 3-isopropylmalate dehydrogenase 0.36 MPMX19_04392 Bifunctional methionine biosynthesis protein MetXA/MetW 0.78 28
Magnetospirillum magneticum AMB-1 0.56 AMB_RS20570 3-isopropylmalate dehydrogenase 0.40 AMB_RS20095 methionine biosynthesis protein MetW — —
Rhodospirillum rubrum S1H 0.56 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.39 Rru_A3267 Methionine biosynthesis MetW (NCBI) 0.90 10
Azospirillum brasilense Sp245 0.55 AZOBR_RS14130 3-isopropylmalate dehydrogenase 0.38 AZOBR_RS20470 methionine biosynthesis protein low > 97
Rhodopseudomonas palustris CGA009 0.53 TX73_001175 3-isopropylmalate dehydrogenase 0.35 TX73_023020 methionine biosynthesis protein MetW — —

Not shown: 66 genomes with orthologs for PP_1988 only; 0 genomes with orthologs for PP_5098 only