Conservation of cofitness between PP_1985 and PP_5098 in Pseudomonas putida KT2440

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1985 3-isopropylmalate dehydratase large subunit 1.0 PP_5098 methionine biosynthesis protein MetW 0.87 16
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.85 PfGW456L13_1006 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.94 11
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.84 Pf1N1B4_2337 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.90 8
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.84 Pf6N2E2_4596 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.85 10
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_21400 isopropylmalate isomerase 0.84 AO356_13405 methionine biosynthesis protein MetW 0.95 3
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_20620 isopropylmalate isomerase 0.86 AO353_08185 methionine biosynthesis protein MetW 0.97 3
Pseudomonas simiae WCS417 0.89 PS417_18600 isopropylmalate isomerase 0.85 PS417_26745 methionine biosynthesis protein MetW 0.91 6
Pseudomonas sp. RS175 0.89 PFR28_02824 3-isopropylmalate dehydratase large subunit 0.85 PFR28_04246 Bifunctional methionine biosynthesis protein MetXA/MetW 0.43 32
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.84 PFLU_RS28390 methionine biosynthesis protein MetW 0.90 5
Pseudomonas fluorescens SBW25 0.89 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.84 PFLU_RS28390 methionine biosynthesis protein MetW 0.81 8
Pseudomonas stutzeri RCH2 0.88 Psest_2591 3-isopropylmalate dehydratase, large subunit 0.78 Psest_0279 methionine biosynthesis protein MetW 0.92 4
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.84 Psyr_0473 Methionine biosynthesis MetW 0.93 8
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.84 Psyr_0473 Methionine biosynthesis MetW 0.93 10
Pseudomonas sp. S08-1 0.86 OH686_04480 3-isopropylmalate dehydratase large subunit 0.77 OH686_11005 methionine biosynthesis protein MetW low > 80
Marinobacter adhaerens HP15 0.78 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain 0.57 HP15_283 methionine biosynthesis protein MetW 0.83 18
Acinetobacter radioresistens SK82 0.72 MPMX26_00345 3-isopropylmalate dehydratase large subunit 0.54 MPMX26_00402 Bifunctional methionine biosynthesis protein MetXA/MetW low > 36
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit 0.39 ABZR87_RS05205 methionine biosynthesis protein MetW low > 80
Ralstonia solanacearum PSI07 0.72 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.39 RPSI07_RS23820 methionine biosynthesis protein MetW 0.53 74
Cupriavidus basilensis FW507-4G11 0.72 RR42_RS14400 isopropylmalate isomerase 0.41 RR42_RS01165 methionine biosynthesis protein MetW low > 128
Ralstonia solanacearum GMI1000 0.72 RS_RS10000 3-isopropylmalate dehydratase large subunit 0.38 RS_RS00130 methionine biosynthesis protein MetW low > 80
Ralstonia solanacearum UW163 0.71 UW163_RS11105 3-isopropylmalate dehydratase large subunit 0.41 UW163_RS04050 methionine biosynthesis protein MetW — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit 0.41 RALBFv3_RS09530 methionine biosynthesis protein MetW 0.54 32
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.36 QEN71_RS00285 methionine biosynthesis protein MetW low > 153
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.36 H281DRAFT_02215 methionine biosynthesis protein MetW 0.76 3
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS33915 isopropylmalate isomerase 0.35 BPHYT_RS01590 methionine biosynthesis protein MetW 0.78 49
Paraburkholderia graminis OAS925 0.71 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit 0.36 ABIE53_000413 methionine biosynthesis protein MetW 0.63 28
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS16515 isopropylmalate isomerase 0.37 HSERO_RS00460 methionine biosynthesis protein MetW low > 78
Variovorax sp. OAS795 0.69 ABID97_RS08465 3-isopropylmalate dehydratase large subunit 0.35 ABID97_RS02595 methionine biosynthesis protein MetW — —
Variovorax sp. SCN45 0.68 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.35 GFF3264 Methionine biosynthesis protein MetW low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.37 GFF2448 Methionine biosynthesis protein MetW low > 90
Acidovorax sp. GW101-3H11 0.67 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.36 Ac3H11_4278 Methionine biosynthesis protein MetW 0.96 5
Azospirillum sp. SherDot2 0.66 MPMX19_01998 3-isopropylmalate dehydratase large subunit 0.36 MPMX19_04392 Bifunctional methionine biosynthesis protein MetXA/MetW 0.69 60
Azospirillum brasilense Sp245 0.66 AZOBR_RS03545 isopropylmalate isomerase 0.38 AZOBR_RS20470 methionine biosynthesis protein low > 97
Rhodospirillum rubrum S1H 0.66 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI) 0.39 Rru_A3267 Methionine biosynthesis MetW (NCBI) 0.95 6
Dechlorosoma suillum PS 0.66 Dsui_3201 3-isopropylmalate dehydratase, large subunit 0.37 Dsui_0740 methionine biosynthesis protein MetW — —
Magnetospirillum magneticum AMB-1 0.63 AMB_RS20560 3-isopropylmalate dehydratase large subunit 0.40 AMB_RS20095 methionine biosynthesis protein MetW — —
Rhodopseudomonas palustris CGA009 0.62 TX73_001245 3-isopropylmalate dehydratase large subunit 0.35 TX73_023020 methionine biosynthesis protein MetW — —

Not shown: 66 genomes with orthologs for PP_1985 only; 0 genomes with orthologs for PP_5098 only