Conservation of cofitness between PP_4475 and PP_4722 in Pseudomonas putida KT2440

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4475 succinylglutamate desuccinylase 1.0 PP_4722 Transcription elongation factor GreA 0.53 2
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_02995 succinylglutamate desuccinylase 0.80 AO353_05625 transcription elongation factor GreA low > 101
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_5671 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.89 Pf6N2E2_3363 Transcription elongation factor GreA — —
Pseudomonas sp. RS175 0.78 PFR28_03277 Succinylglutamate desuccinylase 0.85 PFR28_00078 Transcription elongation factor GreA — —
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS23285 succinylglutamate desuccinylase 0.80 PFLU_RS25875 transcription elongation factor GreA low > 109
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_18755 succinylglutamate desuccinylase 0.87 AO356_07475 transcription elongation factor GreA — —
Pseudomonas fluorescens SBW25 0.78 PFLU_RS23285 succinylglutamate desuccinylase 0.80 PFLU_RS25875 transcription elongation factor GreA 0.57 106
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_1977 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.79 PfGW456L13_5098 Transcription elongation factor GreA — —
Pseudomonas simiae WCS417 0.77 PS417_21680 succinylglutamate desuccinylase 0.79 PS417_24035 transcription elongation factor GreA — —
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.80 Pf1N1B4_1171 Transcription elongation factor GreA — —
Pseudomonas sp. S08-1 0.74 OH686_21320 succinylglutamate desuccinylase 0.81 OH686_17085 Transcription elongation factor GreA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_3559 succinylglutamate desuccinylase 0.82 Psyr_4190 transcription elongation factor GreA — —
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_3559 succinylglutamate desuccinylase 0.82 Psyr_4190 transcription elongation factor GreA — —
Pseudomonas stutzeri RCH2 0.45 Psest_2717 Succinylglutamate desuccinylase 0.77 Psest_0969 transcription elongation factor GreA 0.26 37
Shewanella oneidensis MR-1 0.35 SO2338 astE succinylglutamate desuccinylase (NCBI ptt file) 0.60 SO1191 greA transcription elongation factor GreA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.35 Shewana3_2132 succinylglutamate desuccinylase (RefSeq) 0.61 Shewana3_1017 transcription elongation factor GreA (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.35 MIT1002_01538 Succinylglutamate desuccinylase 0.60 MIT1002_01468 Transcript cleavage factor GreA — —
Shewanella amazonensis SB2B 0.35 Sama_1708 succinylglutamate desuccinylase (RefSeq) 0.59 Sama_0951 GreA/GreB family elongation factor (RefSeq) low > 62
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_06483 succinylglutamate desuccinylase 0.46 H281DRAFT_04404 GreA/GreB family elongation factor low > 103
Acinetobacter radioresistens SK82 0.34 MPMX26_02247 Succinylglutamate desuccinylase 0.56 MPMX26_00765 Transcription elongation factor GreA low > 36
Paraburkholderia graminis OAS925 0.33 ABIE53_001774 succinylglutamate desuccinylase 0.46 ABIE53_003003 transcription elongation factor GreA low > 113
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS23350 succinylglutamate desuccinylase 0.47 QEN71_RS04785 transcription elongation factor GreA low > 153
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS07720 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.46 BPHYT_RS14185 transcription elongation factor GreA low > 109
Enterobacter asburiae PDN3 0.32 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96) 0.59 EX28DRAFT_3232 transcription elongation factor GreA — —
Shewanella loihica PV-4 0.32 Shew_1924 succinylglutamate desuccinylase (RefSeq) 0.61 Shew_2837 transcription elongation factor GreA (RefSeq) — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_1551 succinylglutamate desuccinylase (EC 3.5.1.96) 0.58 B158DRAFT_0617 transcription elongation factor GreA — —
Escherichia coli ECRC98 0.31 JDDGAC_01500 astE succinylglutamate desuccinylase 0.60 JDDGAC_21670 greA transcription elongation factor GreA — —
Escherichia coli ECRC102 0.31 NIAGMN_01140 astE succinylglutamate desuccinylase 0.60 NIAGMN_15805 greA transcription elongation factor GreA — —
Escherichia coli ECRC99 0.31 KEDOAH_01185 astE succinylglutamate desuccinylase 0.60 KEDOAH_10105 greA transcription elongation factor GreA — —
Escherichia coli ECRC101 0.31 MCAODC_18485 astE succinylglutamate desuccinylase 0.60 MCAODC_08565 greA transcription elongation factor GreA — —
Enterobacter sp. TBS_079 0.31 MPMX20_01869 Succinylglutamate desuccinylase 0.59 MPMX20_04085 Transcription elongation factor GreA low > 85
Escherichia coli ECRC101 0.31 OKFHMN_26925 astE succinylglutamate desuccinylase 0.60 OKFHMN_18045 greA transcription elongation factor GreA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF3496 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.61 GFF2922 Transcription elongation factor GreA low > 78
Escherichia coli BW25113 0.31 b1744 astE succinylglutamate desuccinylase (NCBI) 0.60 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01988 Succinylglutamate desuccinylase 0.60 OHPLBJKB_00519 Transcription elongation factor GreA low > 73
Escherichia coli ECOR27 0.31 NOLOHH_17440 astE succinylglutamate desuccinylase 0.60 NOLOHH_09845 greA transcription elongation factor GreA — —
Escherichia coli BL21 0.31 ECD_01713 succinylglutamate desuccinylase 0.60 ECD_03046 transcript cleavage factor low > 60
Escherichia fergusonii Becca 0.31 EFB2_02249 Succinylglutamate desuccinylase 0.60 EFB2_00642 Transcription elongation factor GreA low > 86
Serratia liquefaciens MT49 0.31 IAI46_15315 succinylglutamate desuccinylase 0.56 IAI46_01880 transcription elongation factor GreA low > 86
Escherichia coli Nissle 1917 0.31 ECOLIN_RS09725 succinylglutamate desuccinylase 0.60 ECOLIN_RS18320 transcription elongation factor GreA — —
Marinobacter adhaerens HP15 0.31 HP15_3034 succinylglutamate desuccinylase 0.59 HP15_3076 protein containing prokaryotic transcription elongation factor GreA domain low > 73
Escherichia coli ECRC62 0.31 BNILDI_16225 astE succinylglutamate desuccinylase 0.60 BNILDI_01690 greA transcription elongation factor GreA — —
Escherichia coli ECOR38 0.31 HEPCGN_05290 astE succinylglutamate desuccinylase 0.60 HEPCGN_16920 greA transcription elongation factor GreA — —
Rahnella sp. WP5 0.29 EX31_RS17390 succinylglutamate desuccinylase 0.56 EX31_RS08595 transcription elongation factor GreA low > 89
Klebsiella michiganensis M5al 0.29 BWI76_RS11690 succinylglutamate desuccinylase 0.59 BWI76_RS25160 transcription elongation factor GreA low > 92
Pantoea sp. MT58 0.28 IAI47_11075 succinylglutamate desuccinylase 0.58 IAI47_17080 transcription elongation factor GreA low > 76
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_06280 succinylglutamate desuccinylase 0.53 CSW01_03330 transcription elongation factor GreA low > 62

Not shown: 0 genomes with orthologs for PP_4475 only; 50 genomes with orthologs for PP_4722 only