Conservation of cofitness between PP_3118 and PP_4158 in Pseudomonas putida KT2440

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3118 DNA linked enzyme involved in DNA repair 1.0 PP_4158 sensor protein 0.19 11
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_2086 DNA polymerase-like protein PA0670 0.77 Pf6N2E2_2491 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_22710 DNA repair nucleotidyltransferase 0.76 AO353_18930 histidine kinase low > 101
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_21815 DNA repair nucleotidyltransferase 0.79 AO356_03300 histidine kinase low > 104
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_5680 DNA polymerase-like protein PA0670 0.77 Pf1N1B4_312 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) low > 87
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_2821 DNA polymerase-like protein PA0670 0.79 PfGW456L13_2204 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) low > 87
Pseudomonas sp. RS175 0.63 PFR28_01354 Protein ImuB 0.78 PFR28_00942 Sensor protein KdpD low > 88
Pseudomonas simiae WCS417 0.62 PS417_15585 DNA repair nucleotidyltransferase 0.75 PS417_08300 histidine kinase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_2522 conserved hypothetical protein 0.77 Psyr_2050 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA low > 86
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_2522 conserved hypothetical protein 0.77 Psyr_2050 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA low > 86
Pseudomonas fluorescens SBW25 0.60 PFLU_RS17570 DNA polymerase Y family protein 0.75 PFLU_RS08240 sensor histidine kinase KdpD low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS17570 DNA polymerase Y family protein 0.75 PFLU_RS08240 sensor histidine kinase KdpD low > 109
Pseudomonas sp. S08-1 0.55 OH686_02405 DNA polymerase IV-like protein ImuB 0.70 OH686_01890 Osmosensitive K+ channel histidine kinase KdpD low > 80
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS18205 DNA polymerase Y family protein 0.44 ABZR86_RS13210 sensor histidine kinase KdpD low > 74
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.3896.1 hypothetical protein 0.40 Xcc-8004.4379.1 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) low > 74
Paraburkholderia sabiae LMG 24235 0.17 QEN71_RS43590 DNA polymerase Y family protein 0.28 QEN71_RS24345 DUF4118 domain-containing protein low > 153
Dechlorosoma suillum PS 0.17 Dsui_2266 nucleotidyltransferase/DNA polymerase involved in DNA repair 0.30 Dsui_0272 osmosensitive K+ channel histidine kinase — —
Paraburkholderia graminis OAS925 0.15 ABIE53_000205 protein ImuB 0.26 ABIE53_001556 two-component system sensor histidine kinase KdpD low > 113
Paraburkholderia bryophila 376MFSha3.1 0.15 H281DRAFT_04986 protein ImuB 0.27 H281DRAFT_04532 two-component system, OmpR family, sensor histidine kinase KdpD low > 103
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS32800 nucleotidyltransferase 0.28 RR42_RS00495 histidine kinase low > 128
Ralstonia solanacearum GMI1000 0.14 RS_RS20935 DNA polymerase Y family protein 0.29 RS_RS16960 sensor histidine kinase KdpD low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF4008 DNA polymerase-like protein PA0670 0.41 GFF4474 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) low > 90
Herbaspirillum seropedicae SmR1 0.13 HSERO_RS11285 DNA polymerase 0.29 HSERO_RS18855 sensor protein KdpD low > 78
Ralstonia solanacearum PSI07 0.13 RPSI07_RS03295 DNA polymerase Y family protein 0.29 RPSI07_RS08140 sensor histidine kinase KdpD low > 81
Ralstonia sp. UNC404CL21Col 0.13 ABZR87_RS20565 DNA polymerase Y family protein 0.28 ABZR87_RS04525 sensor histidine kinase KdpD low > 80
Sinorhizobium meliloti 1021 0.12 SMc03789 hypothetical protein 0.27 SMa2327 sensor protein low > 103
Bosea sp. OAE506 0.11 ABIE41_RS17350 DNA polymerase Y family protein 0.37 ABIE41_RS24230 sensor histidine kinase KdpD — —
Ralstonia solanacearum UW163 0.11 UW163_RS19255 DNA polymerase Y family protein 0.29 UW163_RS04465 sensor histidine kinase KdpD — —
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS19920 DNA polymerase Y family protein 0.29 RALBFv3_RS09130 sensor histidine kinase KdpD low > 76
Sphingomonas koreensis DSMZ 15582 0.11 Ga0059261_2477 Nucleotidyltransferase/DNA polymerase involved in DNA repair 0.26 Ga0059261_3881 Osmosensitive K+ channel histidine kinase low > 68
Variovorax sp. SCN45 0.11 GFF679 DNA polymerase-like protein PA0670 0.26 GFF3520 Osmosensitive K+ channel histidine kinase KdpD 0.43 37
Caulobacter crescentus NA1000 0.10 CCNA_03318 DNA polymerase Y-family protein ImuB 0.32 CCNA_01666 osmosensitive K+ channel histidine kinase kdpD low > 66
Caulobacter crescentus NA1000 Δfur 0.10 CCNA_03318 DNA polymerase Y-family protein ImuB 0.32 CCNA_01666 osmosensitive K+ channel histidine kinase kdpD low > 67
Variovorax sp. OAS795 0.10 ABID97_RS19220 DNA polymerase Y family protein 0.25 ABID97_RS01010 DUF4118 domain-containing protein low > 91
Azospirillum sp. SherDot2 0.09 MPMX19_00258 Protein ImuB 0.34 MPMX19_03748 Sensor protein KdpD low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.09 A4249_RS05690 DNA polymerase Y family protein 0.29 A4249_RS15630 sensor histidine kinase KdpD low > 48
Magnetospirillum magneticum AMB-1 0.08 AMB_RS15105 DNA polymerase Y family protein 0.36 AMB_RS09655 sensor histidine kinase KdpD — —
Rhodopseudomonas palustris CGA009 0.07 TX73_009270 DNA polymerase Y family protein 0.33 TX73_015550 sensor histidine kinase KdpD low > 86
Acidovorax sp. GW101-3H11 0.07 Ac3H11_4194 DNA polymerase-like protein PA0670 0.28 Ac3H11_2408 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) low > 79
Agrobacterium fabrum C58 0.07 Atu3229 hypothetical protein 0.35 Atu3787 two component sensor kinase low > 89

Not shown: 10 genomes with orthologs for PP_3118 only; 31 genomes with orthologs for PP_4158 only