| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_2455 | | ribose ABC transporter - ATP-binding subunit | 1.0 | PP_2081 | | putative phosphoenolpyruvate synthase regulatory protein | 0.25 | 6 |
| Pseudomonas fluorescens SBW25-INTG | 0.77 | PFLU_RS20375 | | sugar ABC transporter ATP-binding protein | 0.90 | PFLU_RS22635 | | kinase/pyrophosphorylase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.77 | PFLU_RS20375 | | sugar ABC transporter ATP-binding protein | 0.90 | PFLU_RS22635 | | kinase/pyrophosphorylase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.77 | AO353_20820 | | sugar ABC transporter ATP-binding protein | 0.90 | AO353_00875 | | transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.76 | Pf6N2E2_162 | | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | 0.91 | Pf6N2E2_2391 | | FIG137360: hypothetical protein | low | > 103 |
| Pseudomonas simiae WCS417 | 0.76 | PS417_18400 | | D-ribose ABC transporter, ATPase component RbsA (from data) | 0.90 | PS417_21025 | | PEP synthetase regulatory protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.76 | AO356_00965 | | sugar ABC transporter ATP-binding protein | 0.91 | AO356_02830 | | transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.76 | PfGW456L13_3911 | | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | 0.91 | PfGW456L13_4113 | | FIG137360: hypothetical protein | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.76 | Psyr_2152 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.92 | Psyr_2089 | | Protein of unknown function DUF299 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.76 | Psyr_2152 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.92 | Psyr_2089 | | Protein of unknown function DUF299 | low | > 86 |
| Pseudomonas sp. RS175 | 0.76 | PFR28_02736 | | Arabinose import ATP-binding protein AraG | 0.91 | PFR28_01037 | | Phosphoenolpyruvate synthase regulatory protein | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.75 | Pf1N1B4_6034 | | D-ribose ABC transporter, ATPase component RbsA (from data) | 0.91 | Pf1N1B4_3824 | | FIG137360: hypothetical protein | low | > 87 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_05226 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.48 | H281DRAFT_00626 | | hypothetical protein | — | — |
| Burkholderia phytofirmans PsJN | 0.71 | BPHYT_RS11215 | | ribose ABC transporter ATPase | 0.48 | BPHYT_RS12060 | | hypothetical protein | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.69 | ABIE53_002324 | | ribose transport system ATP-binding protein | 0.48 | ABIE53_002487 | | regulator of PEP synthase PpsR (kinase-PPPase family) | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.68 | QEN71_RS07345 | | sugar ABC transporter ATP-binding protein | 0.49 | QEN71_RS06500 | | pyruvate, water dikinase regulatory protein | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.61 | HSERO_RS11485 | | D-ribose ABC transporter, ATPase component RbsA (from data) | 0.48 | HSERO_RS10960 | | PEP synthetase regulatory protein | low | > 78 |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS09965 | | sugar ABC transporter ATP-binding protein | 0.48 | ABZR87_RS11920 | | pyruvate, water dikinase regulatory protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.56 | RS_RS05030 | | sugar ABC transporter ATP-binding protein | 0.49 | RS_RS07125 | | phosphoenolpyruvate synthase regulatory protein | — | — |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS11715 | | sugar ABC transporter ATP-binding protein | 0.49 | UW163_RS13800 | | kinase/pyrophosphorylase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS14250 | | sugar ABC transporter ATP-binding protein | 0.49 | RALBFv3_RS00470 | | kinase/pyrophosphorylase | — | — |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS19215 | | sugar ABC transporter ATP-binding protein | 0.49 | RPSI07_RS17020 | | kinase/pyrophosphorylase | — | — |
| Variovorax sp. SCN45 | 0.54 | GFF2139 | | Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) | 0.48 | GFF2819 | | Phosphoenolpyruvate synthase regulatory protein | low | > 127 |
| Variovorax sp. OAS795 | 0.53 | ABID97_RS24760 | | sugar ABC transporter ATP-binding protein | 0.47 | ABID97_RS10810 | | pyruvate, water dikinase regulatory protein | — | — |
| Sinorhizobium meliloti 1021 | 0.37 | SM_b20507 | | L-arabinose transporter ATP-binding protein | 0.18 | SMc02793 | | hypothetical protein | low | > 103 |
| Agrobacterium fabrum C58 | 0.37 | Atu2819 | | ABC transporter, nucleotide binding/ATPase protein (ribose) | 0.20 | Atu0001 | | hypothetical protein | low | > 89 |
| Azospirillum sp. SherDot2 | 0.36 | MPMX19_03312 | | Galactose/methyl galactoside import ATP-binding protein MglA | 0.20 | MPMX19_02558 | | Putative pyruvate, phosphate dikinase regulatory protein | — | — |
| Rhizobium sp. OAE497 | 0.35 | ABIE40_RS17080 | | L-arabinose ABC transporter ATP-binding protein AraG | 0.18 | ABIE40_RS19240 | | pyruvate, water dikinase regulatory protein | low | > 107 |
| Enterobacter asburiae PDN3 | 0.34 | EX28DRAFT_0653 | | ABC-type sugar transport system, ATPase component | 0.47 | EX28DRAFT_1705 | | Uncharacterized protein conserved in bacteria | low | > 76 |
| Escherichia fergusonii Becca | 0.34 | EFB2_00572 | | Ribose import ATP-binding protein RbsA | 0.48 | EFB2_02288 | | Phosphoenolpyruvate synthase regulatory protein | low | > 86 |
| Escherichia coli Nissle 1917 | 0.34 | ECOLIN_RS18685 | | sugar ABC transporter ATP-binding protein | 0.48 | ECOLIN_RS09520 | | posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR | — | — |
| Escherichia coli ECOR38 | 0.34 | HEPCGN_16545 | xylG | D-xylose ABC transporter ATP-binding protein | 0.48 | HEPCGN_05505 | ppsR | posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR | low | > 85 |
| Enterobacter sp. TBS_079 | 0.34 | MPMX20_02807 | | Arabinose import ATP-binding protein AraG | 0.48 | MPMX20_01921 | | Phosphoenolpyruvate synthase regulatory protein | low | > 85 |
| Rahnella sp. WP5 | 0.33 | EX31_RS06650 | | L-arabinose ABC transporter ATP-binding protein AraG | 0.50 | EX31_RS13940 | | kinase/pyrophosphorylase | low | > 89 |
| Escherichia coli BW25113 | 0.33 | b4087 | alsA | fused D-allose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | 0.48 | b1703 | ydiA | hypothetical protein (NCBI) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.33 | HER17_RS10805 | | L-arabinose ABC transporter ATP-binding protein AraG | 0.48 | HER17_RS08880 | | kinase/pyrophosphorylase | low | > 75 |
| Escherichia coli ECOR27 | 0.33 | NOLOHH_04980 | alsA | D-allose ABC transporter ATP-binding protein AlsA | 0.48 | NOLOHH_17660 | ppsR | posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.33 | CCNA_00903 | | inositol transport ATP-binding protein IatA | 0.18 | CCNA_00001 | | ATP/GTP-binding protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.33 | CCNA_00903 | | inositol transport ATP-binding protein IatA | 0.18 | CCNA_00001 | | ATP/GTP-binding protein | low | > 66 |
| Dickeya dianthicola ME23 | 0.33 | DZA65_RS11080 | | L-arabinose ABC transporter ATP-binding protein AraG | 0.48 | DZA65_RS13345 | | kinase/pyrophosphorylase | low | > 75 |
| Escherichia coli ECRC98 | 0.33 | JDDGAC_00650 | araG | arabinose ABC transporter ATP-binding protein AraG | 0.48 | JDDGAC_01715 | ppsR | posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR | — | — |
| Escherichia coli ECRC99 | 0.33 | KEDOAH_02030 | araG | arabinose ABC transporter ATP-binding protein AraG | 0.48 | KEDOAH_00970 | ppsR | posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR | — | — |
| Escherichia coli ECRC102 | 0.33 | NIAGMN_01990 | araG | arabinose ABC transporter ATP-binding protein AraG | 0.48 | NIAGMN_00925 | ppsR | posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR | — | — |
| Escherichia coli ECRC101 | 0.33 | MCAODC_19330 | araG | arabinose ABC transporter ATP-binding protein AraG | 0.48 | MCAODC_18270 | ppsR | posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR | — | — |
| Escherichia coli ECRC62 | 0.33 | BNILDI_15305 | araG | arabinose ABC transporter ATP-binding protein AraG | 0.48 | BNILDI_16450 | ppsR | posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR | — | — |
| Escherichia coli ECRC101 | 0.33 | OKFHMN_26075 | araG | arabinose ABC transporter ATP-binding protein AraG | 0.48 | OKFHMN_27140 | ppsR | posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR | — | — |
| Dickeya dianthicola 67-19 | 0.33 | HGI48_RS10600 | | L-arabinose ABC transporter ATP-binding protein AraG | 0.48 | HGI48_RS12880 | | kinase/pyrophosphorylase | low | > 71 |
| Bosea sp. OAE506 | 0.32 | ABIE41_RS06845 | | sugar ABC transporter ATP-binding protein | 0.18 | ABIE41_RS04660 | | pyruvate, water dikinase regulatory protein | low | > 77 |
| Vibrio cholerae E7946 ATCC 55056 | 0.32 | CSW01_06695 | | galactose/methyl galactoside import ATP-binding protein MglA | 0.39 | CSW01_19045 | | phosphoenolpyruvate synthase regulatory protein | low | > 62 |
| Rhodopseudomonas palustris CGA009 | 0.25 | TX73_023765 | | ABC transporter ATP-binding protein | 0.17 | TX73_001550 | | kinase/pyrophosphorylase | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.24 | Psest_1392 | | ABC-type uncharacterized transport systems, ATPase components | 0.87 | Psest_2317 | | Uncharacterized protein conserved in bacteria | low | > 67 |
Not shown: 4 genomes with orthologs for PP_2455 only; 32 genomes with orthologs for PP_2081 only