Conservation of cofitness between PP_4129 and PP_1629 in Pseudomonas putida KT2440

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 1.0 PP_1629 Protein RecA 0.45 12
Pseudomonas sp. RS175 0.93 PFR28_02637 NADH-quinone oxidoreductase subunit L 0.88 PFR28_00472 Protein RecA — —
Pseudomonas fluorescens SBW25 0.91 PFLU_RS18665 NADH-quinone oxidoreductase subunit L 0.88 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS18665 NADH-quinone oxidoreductase subunit L 0.88 PFLU_RS05885 recombinase RecA 0.37 15
Pseudomonas simiae WCS417 0.91 PS417_16625 NADH-quinone oxidoreductase subunit L 0.88 PS417_05815 recombinase RecA — —
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_27790 NADH-quinone oxidoreductase subunit L 0.88 AO353_16805 recombinase RecA — —
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_2623 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) 0.89 PfGW456L13_4668 RecA protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_22020 NADH-quinone oxidoreductase subunit L 0.88 AO356_05670 recombinase RecA — —
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_267 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) 0.88 Pf6N2E2_2993 RecA protein — —
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_4030 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) 0.88 Pf1N1B4_3143 RecA protein low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_3207 NADH dehydrogenase subunit L 0.88 Psyr_1378 RecA protein — —
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_3207 NADH dehydrogenase subunit L 0.88 Psyr_1378 RecA protein — —
Pseudomonas sp. S08-1 0.76 OH686_00105 NADH-ubiquinone oxidoreductase chain L 0.89 OH686_18205 protein RecA low > 80
Shewanella oneidensis MR-1 0.69 SO1011 nuoL NADH dehydrogenase I, L subunit (NCBI ptt file) 0.73 SO3430 recA recA protein (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF1881 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) 0.72 GFF4693 RecA protein — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS07175 NADH-quinone oxidoreductase subunit L 0.73 HER17_RS05045 recombinase RecA low > 75
Escherichia coli ECOR27 0.67 NOLOHH_14510 nuoL NADH-quinone oxidoreductase subunit L 0.71 NOLOHH_12545 recA recombinase RecA — —
Pantoea sp. MT58 0.67 IAI47_06410 NADH-quinone oxidoreductase subunit L 0.70 IAI47_04300 recombinase RecA low > 76
Erwinia tracheiphila SCR3 0.67 LU632_RS08015 nuoL NADH-quinone oxidoreductase subunit L 0.72 LU632_RS15735 recA recombinase RecA low > 74
Enterobacter sp. TBS_079 0.67 MPMX20_03208 NADH-quinone oxidoreductase subunit L 0.71 MPMX20_03580 Protein RecA low > 85
Enterobacter asburiae PDN3 0.67 EX28DRAFT_0332 proton-translocating NADH-quinone oxidoreductase, chain L 0.71 EX28DRAFT_2785 protein RecA — —
Escherichia coli BL21 0.67 ECD_02203 NADH:ubiquinone oxidoreductase, membrane subunit L 0.71 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor low > 60
Escherichia coli ECOR38 0.67 HEPCGN_22095 nuoL NADH-quinone oxidoreductase subunit L 0.71 HEPCGN_19900 recA recombinase RecA low > 85
Escherichia coli Nissle 1917 0.67 ECOLIN_RS13235 NADH-quinone oxidoreductase subunit L 0.71 ECOLIN_RS15060 recombinase RecA — —
Escherichia coli ECRC101 0.67 OKFHMN_22890 nuoL NADH-quinone oxidoreductase subunit L 0.71 OKFHMN_20705 recA recombinase RecA — —
Escherichia fergusonii Becca 0.67 EFB2_01581 NADH-quinone oxidoreductase subunit L 0.71 EFB2_01225 Protein RecA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01428 NADH-quinone oxidoreductase subunit L 0.71 OHPLBJKB_01035 Protein RecA low > 73
Escherichia coli ECRC99 0.67 KEDOAH_05305 nuoL NADH-quinone oxidoreductase subunit L 0.71 KEDOAH_07430 recA recombinase RecA — —
Escherichia coli ECRC102 0.67 NIAGMN_20660 nuoL NADH-quinone oxidoreductase subunit L 0.71 NIAGMN_18475 recA recombinase RecA — —
Escherichia coli ECRC98 0.67 JDDGAC_26855 nuoL NADH-quinone oxidoreductase subunit L 0.71 JDDGAC_24370 recA recombinase RecA — —
Escherichia coli ECRC101 0.67 MCAODC_13930 nuoL NADH-quinone oxidoreductase subunit L 0.71 MCAODC_11230 recA recombinase RecA — —
Escherichia coli ECRC62 0.67 BNILDI_13430 nuoL NADH-quinone oxidoreductase subunit L 0.71 BNILDI_11105 recA recombinase RecA — —
Escherichia coli BW25113 0.67 b2278 nuoL NADH dehydrogenase subunit L (NCBI) 0.71 b2699 recA recombinase A (NCBI) low > 76
Rahnella sp. WP5 0.67 EX31_RS19385 NADH-quinone oxidoreductase subunit L 0.73 EX31_RS07800 recombinase RecA low > 89
Serratia liquefaciens MT49 0.66 IAI46_17660 NADH-quinone oxidoreductase subunit L 0.71 IAI46_03840 recombinase RecA low > 86
Klebsiella michiganensis M5al 0.65 BWI76_RS20140 NADH-quinone oxidoreductase subunit L 0.72 BWI76_RS22180 recombinase RecA — —
Dickeya dianthicola ME23 0.65 DZA65_RS14935 NADH-quinone oxidoreductase subunit L 0.72 DZA65_RS17450 recombinase RecA — —
Dickeya dadantii 3937 0.65 DDA3937_RS14285 NADH-quinone oxidoreductase subunit L 0.72 DDA3937_RS16245 recombinase RecA — —
Dickeya dianthicola 67-19 0.65 HGI48_RS14260 NADH-quinone oxidoreductase subunit L 0.72 HGI48_RS16355 recombinase RecA low > 71
Acinetobacter radioresistens SK82 0.53 MPMX26_02545 NADH-quinone oxidoreductase subunit L 0.74 MPMX26_01308 Protein RecA — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_04220 NADH-quinone oxidoreductase subunit L 0.61 CA264_19695 DNA recombination/repair protein RecA — —
Pedobacter sp. GW460-11-11-14-LB5 0.32 CA265_RS23590 NADH-quinone oxidoreductase subunit L 0.58 CA265_RS00600 recombinase RecA — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS17115 NADH-quinone oxidoreductase subunit L 0.58 ABZR88_RS16740 recombinase RecA — —
Azospirillum brasilense Sp245 0.29 AZOBR_RS07220 NADH:ubiquinone oxidoreductase subunit L 0.68 AZOBR_RS11095 recombinase RecA — —
Azospirillum sp. SherDot2 0.29 MPMX19_01735 NADH-quinone oxidoreductase subunit L 0.67 MPMX19_00869 Protein RecA — —
Magnetospirillum magneticum AMB-1 0.29 AMB_RS13955 NADH-quinone oxidoreductase subunit L 0.66 AMB_RS03205 DNA recombination/repair protein RecA — —
Sinorhizobium meliloti 1021 0.28 SMc01925 NADH dehydrogenase subunit L 0.67 SMc00760 recombinase A — —
Variovorax sp. OAS795 0.28 ABID97_RS20440 NADH-quinone oxidoreductase subunit L 0.65 ABID97_RS02275 recombinase RecA — —
Rhodospirillum rubrum S1H 0.28 Rru_A1566 NADH-plastoquinone oxidoreductase, chain 5 (NCBI) 0.67 Rru_A2819 RecA DNA recombination protein (NCBI) — —
Dinoroseobacter shibae DFL-12 0.28 Dshi_1327 proton-translocating NADH-quinone oxidoreductase, chain L (RefSeq) 0.63 Dshi_1643 recA protein (RefSeq) — —
Rhizobium sp. OAE497 0.26 ABIE40_RS07240 NADH-quinone oxidoreductase subunit L 0.67 ABIE40_RS10320 recombinase RecA — —
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_0698 NADH dehydrogenase subunit L (EC 1.6.5.3) 0.69 Ga0059261_0204 protein RecA — —
Bosea sp. OAE506 0.25 ABIE41_RS17885 NADH-quinone oxidoreductase subunit L 0.64 ABIE41_RS13335 recombinase RecA — —
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS09035 NADH-quinone oxidoreductase subunit L 0.57 HMPREF1181_RS11910 recombinase RecA low > 56
Bacteroides ovatus ATCC 8483 0.24 BACOVA_04855 proton-translocating NADH-quinone oxidoreductase, chain L 0.57 BACOVA_05402 RecA protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.23 BT4060 NADH dehydrogenase I, chain L (NCBI ptt file) 0.56 BT4610 RecA (NCBI ptt file) low > 81
Synechococcus elongatus PCC 7942 0.23 Synpcc7942_1977 ndhF1 NAD(P)H-quinone oxidoreductase subunit F 0.59 Synpcc7942_0348 recA recombinase A — —
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS13300 NADH-quinone oxidoreductase subunit L 0.57 HMPREF1058_RS15965 recombinase RecA low > 67
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS08505 NADH-quinone oxidoreductase subunit L 0.57 ABI39_RS11930 recombinase RecA low > 72

Not shown: 1 genomes with orthologs for PP_4129 only; 42 genomes with orthologs for PP_1629 only