Conservation of cofitness between PP_0126 and PP_1317 in Pseudomonas putida KT2440

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0126 Cytochrome c4 1.0 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.32 7
Pseudomonas fluorescens SBW25 0.80 PFLU_RS00410 cytochrome c4 0.85 PFLU_RS04195 ubiquinol-cytochrome c reductase iron-sulfur subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS00410 cytochrome c4 0.85 PFLU_RS04195 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.51 8
Pseudomonas simiae WCS417 0.80 PS417_00420 cytochrome C 0.85 PS417_04155 ubiquinol-cytochrome C reductase
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_1878 Cytochrome c4 0.86 Pf1N1B4_962 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.81 3
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_10945 cytochrome C 0.87 AO353_15245 ubiquinol-cytochrome c reductase iron-sulfur subunit
Pseudomonas sp. RS175 0.72 PFR28_04627 Cytochrome c4 0.86 PFR28_03606 Ubiquinol-cytochrome c reductase iron-sulfur subunit
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_4159 Cytochrome c4 0.86 Pf6N2E2_5337 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.72 8
Pseudomonas stutzeri RCH2 0.71 Psest_0185 Cytochrome c553 0.84 Psest_3279 ubiquinol-cytochrome c reductase, iron-sulfur subunit
Pseudomonas sp. S08-1 0.71 OH686_12200 Cytochrome c4 0.86 OH686_08390 ubiquinol-cytochrome c reductase, iron-sulfur subunit
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_11450 cytochrome C 0.86 AO356_17065 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.68 5
Alteromonas macleodii MIT1002 0.47 MIT1002_00012 Cytochrome c4 precursor 0.47 MIT1002_00814 Ubiquinol-cytochrome c reductase iron-sulfur subunit low > 70
Marinobacter adhaerens HP15 0.45 HP15_3326 cytochrome c, class I 0.65 HP15_545 ubiquinol-cytochrome c reductase iron-sulfur subunit
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0504 Cytochrome c553 0.54 B158DRAFT_2100 ubiquinol-cytochrome c reductase, iron-sulfur subunit
Shewanella sp. ANA-3 0.41 Shewana3_4111 cytochrome c, class I (RefSeq) 0.50 Shewana3_0601 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq)
Shewanella amazonensis SB2B 0.41 Sama_0091 cytochrome c, class I (RefSeq) 0.53 Sama_3021 ubiquinol--cytochrome-c reductase (RefSeq) 0.90 3
Shewanella oneidensis MR-1 0.41 SO4666 cytcB cytochrome c (NCBI ptt file) 0.51 SO0608 petA ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI ptt file)
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_00570 cytochrome c4 0.56 CSW01_03045 ubiquinol-cytochrome c reductase iron-sulfur subunit low > 62
Shewanella loihica PV-4 0.39 Shew_3716 cytochrome c, class I (RefSeq) 0.53 Shew_0570 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) 0.63 9
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF1351 Cytochrome c4 0.43 GFF1295 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS00765 cytochrome C 0.45 HSERO_RS20245 ubiquinol-cytochrome C reductase
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS17955 cytochrome C 0.43 BPHYT_RS17630 ubiquinol-cytochrome C reductase 0.90 2
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_05601 hypothetical protein 0.44 H281DRAFT_05669 ubiquinol-cytochrome c reductase iron-sulfur subunit
Variovorax sp. OAS795 0.34 ABID97_RS23330 c-type cytochrome 0.49 ABID97_RS22985 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.82 12
Paraburkholderia graminis OAS925 0.34 ABIE53_003754 cbb3-type cytochrome c oxidase subunit III 0.44 ABIE53_003685 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.76 3
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS28105 c-type cytochrome 0.44 QEN71_RS27785 ubiquinol-cytochrome c reductase iron-sulfur subunit low > 153
Ralstonia solanacearum GMI1000 0.32 RS_RS14970 cytochrome c4 0.40 RS_RS14675 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.92 3
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS19090 cytochrome C 0.46 RR42_RS18825 ubiquinol-cytochrome C reductase 0.65 3
Dechlorosoma suillum PS 0.31 Dsui_1304 cytochrome c553 0.51 Dsui_1812 ubiquinol-cytochrome c reductase, iron-sulfur subunit
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS02680 c-type cytochrome 0.40 ABZR87_RS02385 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.74 19
Rhodopseudomonas palustris CGA009 0.22 TX73_003820 c-type cytochrome 0.29 TX73_006120 ubiquinol-cytochrome c reductase iron-sulfur subunit

Not shown: 2 genomes with orthologs for PP_0126 only; 25 genomes with orthologs for PP_1317 only