Conservation of cofitness between PP_5227 and PP_0965 in Pseudomonas putida KT2440

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5227 diaminopimelate decarboxylase 1.0 PP_0965 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) 0.48 11
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_12740 diaminopimelate decarboxylase 0.94 AO356_06970 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) — —
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_4419 Diaminopimelate decarboxylase (EC 4.1.1.20) 0.94 Pf6N2E2_3253 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) — —
Pseudomonas sp. RS175 0.89 PFR28_04375 Diaminopimelate decarboxylase 0.94 PFR28_00186 ATP phosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_845 Diaminopimelate decarboxylase (EC 4.1.1.20) 0.96 PfGW456L13_5001 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) 0.86 28
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_2174 Diaminopimelate decarboxylase (EC 4.1.1.20) 0.93 Pf1N1B4_1067 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_0182 diaminopimelate decarboxylase 0.95 Psyr_4134 ATP phosphoribosyltransferase (homohexameric) — —
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_0182 diaminopimelate decarboxylase 0.95 Psyr_4134 ATP phosphoribosyltransferase (homohexameric) — —
Pseudomonas simiae WCS417 0.87 PS417_27580 diaminopimelate decarboxylase 0.94 PS417_04415 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) — —
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_09035 diaminopimelate decarboxylase 0.96 AO353_05115 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) — —
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS29265 diaminopimelate decarboxylase 0.94 PFLU_RS04465 ATP phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.86 PFLU_RS29265 diaminopimelate decarboxylase 0.94 PFLU_RS04465 ATP phosphoribosyltransferase low > 109
Pseudomonas stutzeri RCH2 0.82 Psest_3764 diaminopimelate decarboxylase 0.92 Psest_3299 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) — —
Pseudomonas sp. S08-1 0.81 OH686_13800 diaminopimelate decarboxylase 0.92 OH686_08475 ATP phosphoribosyltransferase low > 80
Marinobacter adhaerens HP15 0.72 HP15_247 diaminopimelate decarboxylase 0.70 HP15_2429 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) — —
Dechlorosoma suillum PS 0.64 Dsui_1182 diaminopimelate decarboxylase 0.57 Dsui_1410 ATP phosphoribosyltransferase — —
Acinetobacter radioresistens SK82 0.61 MPMX26_02232 Diaminopimelate decarboxylase 0.68 MPMX26_02588 ATP phosphoribosyltransferase low > 36
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS28080 diaminopimelate decarboxylase 0.57 QEN71_RS27870 ATP phosphoribosyltransferase 0.91 20
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS06990 diaminopimelate decarboxylase 0.54 RALBFv3_RS06850 ATP phosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.59 UW163_RS06625 diaminopimelate decarboxylase 0.54 UW163_RS06765 ATP phosphoribosyltransferase — —
Paraburkholderia graminis OAS925 0.59 ABIE53_003749 diaminopimelate decarboxylase 0.58 ABIE53_003702 ATP phosphoribosyltransferase — —
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS17930 diaminopimelate decarboxylase 0.58 BPHYT_RS17715 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) low > 109
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS02640 diaminopimelate decarboxylase 0.54 ABZR87_RS02505 ATP phosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_05606 diaminopimelate decarboxylase 0.58 H281DRAFT_05651 ATP phosphoribosyltransferase (homohexameric) — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS10250 diaminopimelate decarboxylase 0.54 RPSI07_RS10385 ATP phosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS00950 diaminopimelate decarboxylase 0.57 HSERO_RS20350 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) — —
Castellaniella sp019104865 MT123 0.57 ABCV34_RS12685 diaminopimelate decarboxylase 0.55 ABCV34_RS11225 ATP phosphoribosyltransferase — —
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS19050 diaminopimelate decarboxylase 0.55 RR42_RS18920 ATP phosphoribosyltransferase catalytic subunit — —
Variovorax sp. SCN45 0.53 GFF5315 Diaminopimelate decarboxylase (EC 4.1.1.20) 0.56 GFF5344 ATP phosphoribosyltransferase (EC 2.4.2.17) => HisGs — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF1341 Diaminopimelate decarboxylase (EC 4.1.1.20) 0.57 GFF1315 ATP phosphoribosyltransferase (EC 2.4.2.17) — —
Variovorax sp. OAS795 0.51 ABID97_RS23305 diaminopimelate decarboxylase 0.57 ABID97_RS23165 ATP phosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.49 MPMX19_05819 Diaminopimelate decarboxylase 0.41 MPMX19_05544 ATP phosphoribosyltransferase — —
Azospirillum brasilense Sp245 0.49 AZOBR_RS16945 diaminopimelate decarboxylase 0.40 AZOBR_RS19500 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) — —
Agrobacterium fabrum C58 0.47 Atu3601 diaminopimelate decarboxylase 0.16 Atu0679 ATP phosphoribosyltransferase — —
Magnetospirillum magneticum AMB-1 0.46 AMB_RS22725 diaminopimelate decarboxylase 0.40 AMB_RS16910 ATP phosphoribosyltransferase — —
Rhodospirillum rubrum S1H 0.43 Rru_A0396 Diaminopimelate decarboxylase (NCBI) 0.39 Rru_A2772 ATP phosphoribosyltransferase (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_2051 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) 0.41 Ga0059261_1280 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) 0.98 27
Synechococcus elongatus PCC 7942 0.23 Synpcc7942_0262 lysA diaminopimelate decarboxylase 0.29 Synpcc7942_0783 hisG ATP phosphoribosyltransferase catalytic subunit — —

Not shown: 40 genomes with orthologs for PP_5227 only; 1 genomes with orthologs for PP_0965 only