Conservation of cofitness between PP_0496 and PP_0504 in Pseudomonas putida KT2440

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0496 Sodium/alanine symporter 1.0 PP_0504 Outer membrane protein OprG 0.34 13
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_11095 sodium:alanine symporter 0.51 AO356_14880 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_4086 sodium/alanine transporter 0.51 Pf6N2E2_4909 Outer membrane protein W precursor low > 103
Pseudomonas simiae WCS417 0.77 PS417_28135 sodium:alanine symporter 0.56 PS417_25315 membrane protein low > 88
Pseudomonas sp. RS175 0.77 PFR28_04500 Amino-acid carrier protein AlsT 0.52 PFR28_03959 Outer membrane protein W low > 88
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS29820 alanine:cation symporter family protein 0.49 PFLU_RS26950 outer membrane beta-barrel protein low > 109
Pseudomonas fluorescens SBW25 0.76 PFLU_RS29820 alanine:cation symporter family protein 0.49 PFLU_RS26950 outer membrane beta-barrel protein low > 109
Pseudomonas sp. S08-1 0.76 OH686_13280 Probable AGCS sodium/alanine/glycine symporter 0.58 OH686_15635 Outer membrane protein W precursor low > 80
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_5052 Sodium:alanine symporter 0.81 Psyr_4473 OmpW low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_5052 Sodium:alanine symporter 0.81 Psyr_4473 OmpW low > 86
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_09955 sodium:alanine symporter 0.55 AO353_06765 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_2024 sodium/alanine transporter 0.50 Pf1N1B4_2639 Outer membrane protein W precursor low > 87
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_741 sodium/alanine transporter 0.53 PfGW456L13_1302 Outer membrane protein W precursor low > 87
Pseudomonas stutzeri RCH2 0.62 Psest_4077 amino acid carrier protein 0.55 Psest_3571 Outer membrane protein W low > 67
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_11935 sodium:alanine symporter family protein 0.43 CSW01_18465 outer membrane protein W low > 62
Serratia liquefaciens MT49 0.41 IAI46_03050 sodium:alanine symporter family protein 0.42 IAI46_14055 outer membrane protein OmpW low > 86
Shewanella amazonensis SB2B 0.41 Sama_0916 sodium:alanine symporter family protein (RefSeq) 0.42 Sama_1371 outer membrane protein W (RefSeq) low > 62
Shewanella loihica PV-4 0.39 Shew_1092 amino acid carrier protein (RefSeq) 0.42 Shew_2554 outer membrane protein W (RefSeq) low > 60
Shewanella oneidensis MR-1 0.38 SO3541 sodium:alanine symporter family protein (NCBI ptt file) 0.42 SO1673 outer membrane protein OmpW, putative (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF1082 Putative alanine/glycine transport protein 0.40 GFF2731 Outer membrane protein W precursor low > 78
Shewanella sp. ANA-3 0.38 Shewana3_3144 amino acid carrier protein (RefSeq) 0.45 Shewana3_2775 outer membrane protein W (RefSeq) 0.61 6
Enterobacter asburiae PDN3 0.37 EX28DRAFT_3619 amino acid carrier protein 0.41 EX28DRAFT_0927 Outer membrane protein W low > 76
Enterobacter sp. TBS_079 0.37 MPMX20_00715 Amino-acid carrier protein AlsT 0.41 MPMX20_02571 Outer membrane protein W low > 85
Acinetobacter radioresistens SK82 0.37 MPMX26_00623 Amino-acid carrier protein AlsT 0.20 MPMX26_00217 Outer membrane protein W low > 36
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1265.1 sodium/alanine symporter family protein 0.23 Xcc-8004.1234.1 Outer membrane protein W precursor low > 74
Escherichia coli ECRC101 0.36 MCAODC_01600 yaaJ Uncharacterized transporter YaaJ 0.42 MCAODC_21565 ompW outer membrane protein OmpW low > 87
Escherichia coli ECRC100 0.35 OKFHMN_11085 yaaJ Uncharacterized transporter YaaJ 0.42 OKFHMN_28695 ompW outer membrane protein OmpW low > 80
Escherichia coli ECRC99 0.35 KEDOAH_17070 yaaJ Uncharacterized transporter YaaJ 0.42 KEDOAH_25690 ompW outer membrane protein OmpW — —
Escherichia coli ECRC102 0.35 NIAGMN_08935 yaaJ Uncharacterized transporter YaaJ 0.42 NIAGMN_27540 ompW outer membrane protein OmpW — —
Escherichia coli ECRC98 0.35 JDDGAC_14680 yaaJ Uncharacterized transporter YaaJ 0.42 JDDGAC_05880 ompW outer membrane protein OmpW low > 86
Klebsiella michiganensis M5al 0.35 BWI76_RS04265 sodium:alanine symporter family protein 0.41 BWI76_RS11810 outer membrane protein OmpW low > 92
Escherichia coli BL21 0.35 ECD_00007 putative transporter 0.42 ECD_01230 outer membrane protein W low > 61
Escherichia coli BW25113 0.35 b0007 yaaJ predicted transporter (NCBI) 0.42 b1256 ompW outer membrane protein W (NCBI) low > 76
Rahnella sp. WP5 0.35 EX31_RS03925 alanine:cation symporter family protein 0.40 EX31_RS09990 outer membrane protein OmpW low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03653 Amino-acid carrier protein AlsT 0.42 OHPLBJKB_02427 Outer membrane protein W low > 73
Escherichia coli ECRC62 0.35 BNILDI_08190 yaaJ Uncharacterized transporter YaaJ 0.42 BNILDI_18500 ompW outer membrane protein OmpW 0.75 32
Escherichia coli ECOR38 0.35 HEPCGN_09090 yaaJ Uncharacterized transporter YaaJ 0.42 HEPCGN_25160 ompW outer membrane protein OmpW low > 87
Escherichia coli ECOR27 0.35 NOLOHH_03415 yaaJ Uncharacterized transporter YaaJ 0.42 NOLOHH_20355 ompW outer membrane protein OmpW low > 75
Escherichia fergusonii Becca 0.35 EFB2_04036 Amino-acid carrier protein AlsT 0.42 EFB2_02669 Outer membrane protein W low > 86
Escherichia coli Nissle 1917 0.34 ECOLIN_RS00040 sodium:alanine symporter family protein 0.42 ECOLIN_RS07580 outer membrane protein OmpW low > 55
Alteromonas macleodii MIT1002 0.34 MIT1002_01494 Amino-acid carrier protein AlsT 0.42 MIT1002_00027 Outer membrane protein W precursor low > 70
Phaeobacter inhibens DSM 17395 0.27 PGA1_78p00280 putative sodium/alanine symporter 0.26 PGA1_c10290 outer membrane protein low > 62
Castellaniella sp019104865 MT123 0.23 ABCV34_RS11085 sodium:alanine symporter family protein 0.32 ABCV34_RS01650 OmpW family outer membrane protein low > 48
Marinobacter adhaerens HP15 0.23 HP15_3907 sodium/alanine symporter family protein 0.46 HP15_3604 outer membrane protein OmpW low > 73
Dinoroseobacter shibae DFL-12 0.21 Dshi_1808 amino acid carrier protein (RefSeq) 0.26 Dshi_1299 OmpW family protein (RefSeq) low > 64
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS14800 amino acid carrier protein 0.22 QEN71_RS28020 OmpW family outer membrane protein low > 153

Not shown: 11 genomes with orthologs for PP_0496 only; 24 genomes with orthologs for PP_0504 only