Conservation of cofitness between PP_5035 and PP_0422 in Pseudomonas putida KT2440

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5035 Histidine utilization repressor 1.0 PP_0422 Indole-3-glycerol phosphate synthase 0.44 13
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_0366 transcriptional regulator, GntR family 0.82 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_329 Histidine utilization repressor 0.87 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_0366 transcriptional regulator, GntR family 0.82 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_12240 histidine utilization repressor 0.86 AO353_07210 indole-3-glycerol-phosphate synthase 0.25 101
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_1590 Histidine utilization repressor 0.87 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.48 17
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_09640 histidine utilization repressor 0.87 AO356_14440 indole-3-glycerol-phosphate synthase 0.40 36
Pseudomonas sp. RS175 0.87 PFR28_04963 HTH-type transcriptional repressor NagR 0.87 PFR28_04043 Indole-3-glycerol phosphate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_3807 Histidine utilization repressor 0.88 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 103
Pseudomonas fluorescens SBW25 0.84 PFLU_RS01765 histidine utilization repressor 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS01765 histidine utilization repressor 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.35 27
Pseudomonas simiae WCS417 0.84 PS417_01710 histidine utilization repressor 0.86 PS417_25710 indole-3-glycerol-phosphate synthase 0.47 36
Rhizobium sp. OAE497 0.57 ABIE40_RS23900 histidine utilization repressor 0.45 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC — —
Sinorhizobium meliloti 1021 0.57 SMc00674 histidine utilization repressor transcription regulator protein 0.40 SMc00236 Indole-3-glycerol phosphate synthase low > 103
Variovorax sp. SCN45 0.47 GFF6410 Histidine utilization repressor 0.48 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Variovorax sp. OAS795 0.47 ABID97_RS03415 histidine utilization repressor 0.50 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC low > 91
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS16925 histidine utilization repressor 0.51 RR42_RS18310 indole-3-glycerol-phosphate synthase low > 128
Azospirillum sp. SherDot2 0.45 MPMX19_04937 Mannosyl-D-glycerate transport/metabolism system repressor MngR 0.44 MPMX19_01014 Indole-3-glycerol phosphate synthase low > 112
Acidovorax sp. GW101-3H11 0.45 Ac3H11_2559 Histidine utilization repressor 0.49 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 79
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS07755 histidine utilization repressor 0.53 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC low > 153
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_05296 GntR family transcriptional regulator, histidine utilization repressor 0.50 H281DRAFT_05712 indole-3-glycerol phosphate synthase low > 103
Rhodospirillum rubrum S1H 0.44 Rru_A1294 Transcriptional Regulator, Histidine utilization repressor, GntR family (NCBI) 0.45 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) low > 58
Ralstonia solanacearum PSI07 0.43 RPSI07_RS11905 histidine utilization repressor 0.49 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS01035 histidine utilization repressor 0.49 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC low > 80
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS07560 histidine utilization repressor 0.51 BPHYT_RS17405 indole-3-glycerol phosphate synthase — —
Paraburkholderia graminis OAS925 0.43 ABIE53_001730 GntR family histidine utilization transcriptional repressor 0.50 ABIE53_003643 indole-3-glycerol phosphate synthase — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS05400 histidine utilization repressor 0.49 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum UW163 0.43 UW163_RS08225 histidine utilization repressor 0.49 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3591 Histidine utilization repressor 0.50 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 90
Ralstonia solanacearum GMI1000 0.42 RS_RS13260 histidine utilization repressor 0.49 RS_RS14450 Indole-3-glycerol phosphate synthase 1 — —
Pseudomonas sp. S08-1 0.41 OH686_16760 histidine utilization repressor 0.81 OH686_15140 Indole-3-glycerol phosphate synthase low > 80
Castellaniella sp019104865 MT123 0.37 ABCV34_RS12825 histidine utilization repressor 0.51 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC — —
Bosea sp. OAE506 0.34 ABIE41_RS23630 histidine utilization repressor 0.41 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC — —
Caulobacter crescentus NA1000 0.29 CCNA_01013 histidine utilization repressor 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_01013 histidine utilization repressor 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase low > 67
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.3293.1 Histidine utilization repressor 0.58 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 74
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_3966 Transcriptional regulators 0.44 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS06610 histidine utilization repressor 0.42 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC — —
Phaeobacter inhibens DSM 17395 0.18 PGA1_c36370 HTH-type transcriptional regulator, GntR family 0.45 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC — —

Not shown: 16 genomes with orthologs for PP_5035 only; 27 genomes with orthologs for PP_0422 only