Conservation of cofitness between PP_5145 and PP_0396 in Pseudomonas putida KT2440

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) 1.0 PP_0396 conserved protein of unknown function 0.43 10
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_2284 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated 0.89 Pf1N1B4_2522 FIG002076: hypothetical protein 0.36 31
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_953 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated 0.89 PfGW456L13_1195 FIG002076: hypothetical protein low > 87
Pseudomonas sp. RS175 0.93 PFR28_04830 Phosphoenolpyruvate-dependent phosphotransferase system 0.89 PFR28_04069 hypothetical protein 0.50 7
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_10350 phosphoenolpyruvate-protein phosphotransferase 0.89 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_3942 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated 0.89 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 103
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_08465 phosphoenolpyruvate-protein phosphotransferase 0.89 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.39 20
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase 0.89 Psyr_4632 Protein of unknown function DUF444 low > 86
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase 0.89 Psyr_4632 Protein of unknown function DUF444 low > 86
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase 0.89 PFLU_RS27490 YeaH/YhbH family protein 0.32 32
Pseudomonas fluorescens SBW25 0.92 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase 0.89 PFLU_RS27490 YeaH/YhbH family protein low > 109
Pseudomonas simiae WCS417 0.91 PS417_26985 phosphoenolpyruvate-protein phosphotransferase 0.89 PS417_25835 hypothetical protein 0.31 35
Pseudomonas sp. S08-1 0.87 OH686_11430 Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated 0.87 OH686_15015 UPF0229 protein YeaH low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_3862 phosphoenolpyruvate-protein phosphotransferase 0.86 Psest_3673 Uncharacterized conserved protein low > 67
Marinobacter adhaerens HP15 0.68 HP15_463 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain protein 0.65 HP15_2934 protein YeaH 0.56 29
Alteromonas macleodii MIT1002 0.45 MIT1002_00648 Phosphoenolpyruvate-protein phosphotransferase 0.59 MIT1002_01232 hypothetical protein low > 70
Shewanella amazonensis SB2B 0.41 Sama_0864 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) 0.54 Sama_1922 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 62
Shewanella loihica PV-4 0.41 Shew_1039 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) 0.55 Shew_1832 hypothetical protein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP 0.57 CSW01_09385 hypothetical protein low > 62
Shewanella sp. ANA-3 0.41 Shewana3_3042 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) 0.52 Shewana3_1637 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.40 SO1332 ptsP phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file) 0.55 SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Rahnella sp. WP5 0.40 EX31_RS13200 phosphoenolpyruvate--protein phosphotransferase 0.56 EX31_RS06255 YeaH/YhbH family protein low > 89
Serratia liquefaciens MT49 0.39 IAI46_20450 phosphoenolpyruvate--protein phosphotransferase 0.56 IAI46_14380 YeaH/YhbH family protein low > 86
Erwinia tracheiphila SCR3 0.39 LU632_RS06110 ptsP phosphoenolpyruvate--protein phosphotransferase 0.55 LU632_RS13015 YeaH/YhbH family protein low > 74
Escherichia fergusonii Becca 0.39 EFB2_01055 Phosphoenolpyruvate-dependent phosphotransferase system 0.56 EFB2_02210 hypothetical protein low > 86
Escherichia coli ECRC102 0.39 NIAGMN_17775 ptsP phosphoenolpyruvate--protein phosphotransferase 0.56 NIAGMN_01360 yeaH UPF0229 protein YeaH — —
Escherichia coli ECRC101 0.39 OKFHMN_20005 ptsP phosphoenolpyruvate--protein phosphotransferase 0.56 OKFHMN_26705 yeaH UPF0229 protein YeaH — —
Escherichia coli ECRC98 0.39 JDDGAC_23670 ptsP phosphoenolpyruvate--protein phosphotransferase 0.56 JDDGAC_01280 yeaH UPF0229 protein YeaH — —
Escherichia coli Nissle 1917 0.39 ECOLIN_RS15875 phosphoenolpyruvate--protein phosphotransferase 0.56 ECOLIN_RS09945 YeaH/YhbH family protein low > 52
Escherichia coli ECOR27 0.39 NOLOHH_11890 ptsP phosphoenolpyruvate--protein phosphotransferase 0.56 NOLOHH_17235 yeaH UPF0229 protein YeaH — —
Escherichia coli ECRC101 0.39 MCAODC_10530 ptsP phosphoenolpyruvate--protein phosphotransferase 0.56 MCAODC_18705 yeaH UPF0229 protein YeaH — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00901 Phosphoenolpyruvate-dependent phosphotransferase system 0.56 OHPLBJKB_01948 hypothetical protein low > 73
Escherichia coli ECRC99 0.39 KEDOAH_08125 ptsP phosphoenolpyruvate--protein phosphotransferase 0.56 KEDOAH_01405 yeaH UPF0229 protein YeaH — —
Klebsiella michiganensis M5al 0.39 BWI76_RS23270 phosphoenolpyruvate--protein phosphotransferase PtsP 0.56 BWI76_RS11480 hypothetical protein 0.20 92
Escherichia coli ECRC62 0.39 BNILDI_10370 ptsP phosphoenolpyruvate--protein phosphotransferase 0.56 BNILDI_16020 yeaH UPF0229 protein YeaH — —
Escherichia coli BL21 0.39 ECD_02677 PEP-protein phosphotransferase enzyme I; GAF domain containing protein 0.56 ECD_01753 UPF0229 family protein — —
Escherichia coli ECOR38 0.39 HEPCGN_19260 ptsP phosphoenolpyruvate--protein phosphotransferase 0.56 HEPCGN_05095 yeaH UPF0229 protein YeaH low > 85
Escherichia coli BW25113 0.39 b2829 ptsP fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) 0.56 b1784 yeaH yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF1311 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated 0.56 GFF3472 UPF0229 protein YeaH low > 78
Pantoea sp. MT58 0.38 IAI47_03920 phosphoenolpyruvate--protein phosphotransferase 0.56 IAI47_08920 YeaH/YhbH family protein low > 76
Enterobacter asburiae PDN3 0.38 EX28DRAFT_2904 phosphoenolpyruvate-protein phosphotransferase 0.57 EX28DRAFT_1777 Uncharacterized conserved protein low > 76
Enterobacter sp. TBS_079 0.38 MPMX20_03692 Phosphoenolpyruvate-dependent phosphotransferase system 0.57 MPMX20_01839 hypothetical protein low > 85
Dickeya dadantii 3937 0.38 DDA3937_RS04950 phosphoenolpyruvate--protein phosphotransferase 0.54 DDA3937_RS10240 YeaH/YhbH family protein low > 74
Dickeya dianthicola 67-19 0.38 HGI48_RS04960 phosphoenolpyruvate--protein phosphotransferase 0.54 HGI48_RS10250 YeaH/YhbH family protein low > 71
Dickeya dianthicola ME23 0.38 DZA65_RS05300 phosphoenolpyruvate--protein phosphotransferase 0.54 DZA65_RS10725 YeaH/YhbH family protein low > 75
Pectobacterium carotovorum WPP14 0.37 HER17_RS16580 phosphoenolpyruvate--protein phosphotransferase 0.57 HER17_RS11155 YeaH/YhbH family protein low > 75
Sinorhizobium meliloti 1021 0.27 SMc02437 phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein 0.40 SMc01266 hypothetical protein — —
Rhizobium sp. OAE497 0.27 ABIE40_RS17300 phosphoenolpyruvate--protein phosphotransferase 0.38 ABIE40_RS12545 YeaH/YhbH family protein — —
Azospirillum sp. SherDot2 0.26 MPMX19_02675 Phosphoenolpyruvate-dependent phosphotransferase system 0.42 MPMX19_02156 hypothetical protein 0.48 28
Azospirillum brasilense Sp245 0.26 AZOBR_RS18900 peptidase 0.39 AZOBR_RS12650 hypothetical protein low > 97
Magnetospirillum magneticum AMB-1 0.26 AMB_RS08150 phosphoenolpyruvate--protein phosphotransferase 0.43 AMB_RS10890 hypothetical protein low > 64
Phaeobacter inhibens DSM 17395 0.21 PGA1_c23500 phosphoenolpyruvate-protein phosphotransferase PtsP 0.41 PGA1_c02480 Uncharacterized conserved protein low > 62

Not shown: 10 genomes with orthologs for PP_5145 only; 11 genomes with orthologs for PP_0396 only