| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens SBW25 | 1.0 | PFLU_RS07240 | | sigma factor AlgU regulatory protein MucB | 1.0 | PFLU_RS13395 | | carbohydrate ABC transporter permease | 0.63 | 6 |
| Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS07240 | | sigma factor AlgU regulatory protein MucB | 1.00 | PFLU_RS13395 | | carbohydrate ABC transporter permease | low | > 109 |
| Pseudomonas simiae WCS417 | 0.92 | PS417_07130 | | RNA polymerase sigma-H factor AlgU | 1.00 | PS417_12705 | | ABC transporter for D-Mannitol and D-Sorbitol, permease component 1 (from data) | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.76 | AO353_17635 | | RNA polymerase subunit sigma | 0.98 | AO353_25890 | | sugar ABC transporter permease | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.75 | Pf1N1B4_3325 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.99 | Pf1N1B4_4848 | | Various polyols ABC transporter, permease component 2 | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.75 | PfGW456L13_4514 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.97 | PfGW456L13_3040 | | Various polyols ABC transporter, permease component 2 | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.72 | AO356_04565 | | RNA polymerase subunit sigma | 0.99 | AO356_27680 | | sugar ABC transporter permease | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.71 | Pf6N2E2_2754 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.98 | Pf6N2E2_808 | | Various polyols ABC transporter, permease component 2 | low | > 103 |
| Pseudomonas sp. RS175 | 0.70 | PFR28_00692 | | Sigma factor AlgU regulatory protein MucB | 0.98 | PFR28_01711 | | Diacetylchitobiose uptake system permease protein DasC | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_3956 | | sigma E regulatory protein, MucB/RseB | 0.90 | Psyr_2438 | | sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein | 0.40 | 50 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_3956 | | sigma E regulatory protein, MucB/RseB | 0.90 | Psyr_2438 | | sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.51 | Psest_3098 | | Negative regulator of sigma E activity | 0.17 | Psest_0865 | | maltose ABC transporter, permease component 2 (MalG) (from data) | — | — |
| Burkholderia phytofirmans PsJN | 0.17 | BPHYT_RS14395 | | sugar dehydratase | 0.65 | BPHYT_RS16105 | | ABC transporter for D-Sorbitol, permease component 1 (from data) | low | > 109 |
| Vibrio cholerae E7946 ATCC 55056 | 0.17 | CSW01_12475 | | sigma-E factor regulatory protein RseB | 0.17 | CSW01_18845 | | maltose ABC transporter permease | — | — |
| Paraburkholderia graminis OAS925 | 0.16 | ABIE53_003041 | | sigma-E factor negative regulatory protein RseB | 0.63 | ABIE53_003394 | | sorbitol/mannitol transport system permease protein | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.16 | H281DRAFT_04357 | | sigma E regulatory protein, MucB/RseB | 0.66 | H281DRAFT_04157 | | sorbitol ABC transporter membrane protein /mannitol ABC transporter membrane protein | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.16 | QEN71_RS04585 | | MucB/RseB C-terminal domain-containing protein | 0.66 | QEN71_RS02600 | | carbohydrate ABC transporter permease | low | > 153 |
| Pantoea sp. MT58 | 0.15 | IAI47_04860 | | sigma-E factor regulatory protein RseB | 0.25 | IAI47_20090 | | carbohydrate ABC transporter permease | low | > 76 |
| Herbaspirillum seropedicae SmR1 | 0.14 | HSERO_RS09635 | | transcriptional regulator | 0.61 | HSERO_RS02200 | | mannitol ABC transporter permease | low | > 78 |
| Dickeya dianthicola ME23 | 0.14 | DZA65_RS16920 | | sigma-E factor regulatory protein RseB | 0.22 | DZA65_RS04500 | | carbohydrate ABC transporter permease | low | > 75 |
| Dickeya dianthicola 67-19 | 0.14 | HGI48_RS15840 | | sigma-E factor regulatory protein RseB | 0.23 | HGI48_RS04575 | | carbohydrate ABC transporter permease | low | > 71 |
| Dickeya dadantii 3937 | 0.14 | DDA3937_RS15755 | | sigma-E factor regulatory protein RseB | 0.22 | DDA3937_RS04620 | | carbohydrate ABC transporter permease | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.14 | GFF2109 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.14 | GFF1402 | | Maltose/maltodextrin ABC transporter, permease protein MalG | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.13 | Ac3H11_1571 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.60 | Ac3H11_2942 | | ABC transporter for D-Sorbitol, permease component 1 (from data) | — | — |
| Enterobacter sp. TBS_079 | 0.13 | MPMX20_03442 | | Sigma-E factor regulatory protein RseB | 0.19 | MPMX20_02465 | | Inner membrane ABC transporter permease protein YcjP | low | > 85 |
| Klebsiella michiganensis M5al | 0.13 | BWI76_RS21345 | | sigma-E factor regulatory protein RseB | 0.18 | BWI76_RS03130 | | putative SN-glycerol-3-phosphate transport system permease | low | > 92 |
| Enterobacter asburiae PDN3 | 0.13 | EX28DRAFT_0074 | | sigma E regulatory protein, MucB/RseB | 0.19 | EX28DRAFT_0983 | | ABC-type sugar transport system, permease component | low | > 76 |
| Rahnella sp. WP5 | 0.13 | EX31_RS21810 | | sigma-E factor regulatory protein RseB | 0.23 | EX31_RS07055 | | carbohydrate ABC transporter permease | low | > 89 |
| Escherichia coli ECRC102 | 0.13 | NIAGMN_19155 | rseB | sigma-E factor regulatory protein RseB | 0.18 | NIAGMN_26530 | ycjP | Inner membrane ABC transporter permease protein YcjP | — | — |
| Escherichia coli ECOR38 | 0.13 | HEPCGN_20530 | rseB | sigma-E factor regulatory protein RseB | 0.19 | HEPCGN_25830 | ycjP | Inner membrane ABC transporter permease protein YcjP | low | > 87 |
| Escherichia coli ECRC98 | 0.13 | JDDGAC_25050 | rseB | sigma-E factor regulatory protein RseB | 0.18 | JDDGAC_04905 | ycjP | Inner membrane ABC transporter permease protein YcjP | low | > 86 |
| Escherichia coli ECRC100 | 0.13 | OKFHMN_21385 | rseB | sigma-E factor regulatory protein RseB | 0.18 | OKFHMN_02360 | ycjP | Inner membrane ABC transporter permease protein YcjP | low | > 80 |
| Escherichia coli ECRC99 | 0.13 | KEDOAH_06835 | rseB | sigma-E factor regulatory protein RseB | 0.18 | KEDOAH_26415 | ycjP | Inner membrane ABC transporter permease protein YcjP | — | — |
| Escherichia coli ECRC101 | 0.13 | MCAODC_11915 | rseB | sigma-E factor regulatory protein RseB | 0.18 | MCAODC_15910 | ycjP | Inner membrane ABC transporter permease protein YcjP | low | > 87 |
| Escherichia coli BL21 | 0.13 | ECD_02465 | | anti-sigma E factor, binds RseA | 0.18 | ECD_01289 | | putative sugar ABC transporter permease | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.13 | OHPLBJKB_01136 | | Sigma-E factor regulatory protein RseB | 0.18 | OHPLBJKB_02370 | | Inner membrane ABC transporter permease protein YcjP | low | > 73 |
| Escherichia coli ECRC62 | 0.13 | BNILDI_11860 | rseB | sigma-E factor regulatory protein RseB | 0.18 | BNILDI_18205 | ycjP | Inner membrane ABC transporter permease protein YcjP | low | > 75 |
| Escherichia coli BW25113 | 0.13 | b2571 | rseB | periplasmic negative regulator of sigmaE (NCBI) | 0.18 | b1312 | ycjP | predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.13 | ECOLIN_RS14550 | | sigma-E factor regulatory protein RseB | 0.18 | ECOLIN_RS07890 | | carbohydrate ABC transporter permease | low | > 55 |
| Ralstonia solanacearum GMI1000 | 0.13 | RS_RS05235 | | sugar dehydratase | 0.64 | RS_RS10740 | | carbohydrate ABC transporter permease | — | — |
| Escherichia coli ECOR27 | 0.13 | NOLOHH_13060 | rseB | sigma-E factor regulatory protein RseB | 0.18 | NOLOHH_20055 | ycjP | Inner membrane ABC transporter permease protein YcjP | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.13 | LU632_RS15415 | rseB | sigma-E factor regulatory protein RseB | 0.22 | LU632_RS00810 | | carbohydrate ABC transporter permease | low | > 74 |
| Ralstonia sp. UNC404CL21Col | 0.13 | ABZR87_RS10175 | | MucB/RseB C-terminal domain-containing protein | 0.62 | ABZR87_RS18680 | | carbohydrate ABC transporter permease | low | > 80 |
| Variovorax sp. OAS795 | 0.12 | ABID97_RS08340 | | MucB/RseB C-terminal domain-containing protein | 0.62 | ABID97_RS07120 | | carbohydrate ABC transporter permease | low | > 91 |
| Serratia liquefaciens MT49 | 0.12 | IAI46_19575 | | sigma-E factor regulatory protein RseB | 0.24 | IAI46_11760 | | carbohydrate ABC transporter permease | low | > 86 |
| Castellaniella sp019104865 MT123 | 0.12 | ABCV34_RS08345 | | MucB/RseB C-terminal domain-containing protein | 0.19 | ABCV34_RS07885 | | carbohydrate ABC transporter permease | low | > 48 |
| Variovorax sp. SCN45 | 0.12 | GFF3865 | | Sigma factor RpoE negative regulatory protein RseB precursor | 0.62 | GFF5274 | | Various polyols ABC transporter, permease protein 2 | low | > 127 |
Not shown: 14 genomes with orthologs for PFLU_RS07240 only; 14 genomes with orthologs for PFLU_RS13395 only