Conservation of cofitness between PFLU_RS02430 and PFLU_RS07785 in Pseudomonas fluorescens SBW25

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 1.0 PFLU_RS07785 VacJ family lipoprotein 0.83 10
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 1.00 PFLU_RS07785 VacJ family lipoprotein low > 109
Pseudomonas simiae WCS417 0.98 PS417_02355 thiamine biosynthesis protein ThiC 0.97 PS417_07710 membrane protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0544 hydroxymethylpyrimidine synthase 0.75 Psyr_1910 VacJ-like lipoprotein low > 86
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_13010 thiamine biosynthesis protein ThiC 0.80 AO353_00330 hypothetical protein low > 101
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0544 hydroxymethylpyrimidine synthase 0.75 Psyr_1910 VacJ-like lipoprotein low > 86
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.82 Pf6N2E2_2261 VacJ-like lipoprotein precursor low > 103
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_08810 thiamine biosynthesis protein ThiC 0.83 AO356_02190 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.81 Pf1N1B4_62 VacJ-like lipoprotein precursor — —
Pseudomonas sp. RS175 0.94 PFR28_05091 Phosphomethylpyrimidine synthase 0.82 PFR28_01139 Intermembrane phospholipid transport system lipoprotein MlaA 0.41 28
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.83 PfGW456L13_4012 VacJ-like lipoprotein precursor low > 87
Pseudomonas putida KT2440 0.91 PP_4922 Phosphomethylpyrimidine synthase 0.71 PP_2163 VacJ lipoprotein low > 96
Pseudomonas sp. S08-1 0.89 OH686_15885 phosphomethylpyrimidine synthase 0.64 OH686_22720 Outer-membrane-phospholipid-binding lipoprotein MlaA low > 80
Pseudomonas stutzeri RCH2 0.89 Psest_0477 thiamine biosynthesis protein ThiC 0.61 Psest_2712 Surface lipoprotein low > 67
Marinobacter adhaerens HP15 0.80 HP15_453 thiamine biosynthesis protein thiC 0.41 HP15_1860 VacJ family lipoprotein low > 73
Herbaspirillum seropedicae SmR1 0.76 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.39 HSERO_RS20385 ABC transporter — —
Dechlorosoma suillum PS 0.75 Dsui_0422 thiamine biosynthesis protein ThiC 0.41 Dsui_1401 surface lipoprotein — —
Castellaniella sp019104865 MT123 0.75 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.38 ABCV34_RS11195 MlaA family lipoprotein low > 48
Rhodanobacter sp. FW510-T8 0.74 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC 0.28 OKGIIK_12110 ABC transporter low > 52
Pectobacterium carotovorum WPP14 0.72 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.24 HER17_RS06855 phospholipid-binding lipoprotein MlaA low > 75
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.36 ABZR87_RS02540 VacJ family lipoprotein low > 80
Dickeya dadantii 3937 0.72 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.26 DDA3937_RS14625 phospholipid-binding lipoprotein MlaA low > 74
Ralstonia solanacearum PSI07 0.72 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.35 RPSI07_RS10350 ABC transporter low > 81
Ralstonia solanacearum UW163 0.71 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.36 UW163_RS06730 ABC transporter — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.36 RALBFv3_RS06885 ABC transporter low > 76
Rahnella sp. WP5 0.71 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.26 EX31_RS19725 phospholipid-binding lipoprotein MlaA low > 89
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_0295 hydroxymethylpyrimidine synthase 0.38 B158DRAFT_1335 Surface lipoprotein low > 40
Escherichia fergusonii Becca 0.71 EFB2_04617 Phosphomethylpyrimidine synthase 0.24 EFB2_01514 Intermembrane phospholipid transport system lipoprotein MlaA low > 86
Escherichia coli Nissle 1917 0.71 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.24 ECOLIN_RS13570 phospholipid-binding lipoprotein MlaA low > 55
Escherichia coli BW25113 0.71 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.24 b2346 vacJ predicted lipoprotein (NCBI) low > 76
Escherichia coli ECRC98 0.71 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.24 JDDGAC_26495 mlaA phospholipid-binding lipoprotein MlaA low > 86
Escherichia coli ECRC101 0.71 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.24 MCAODC_13565 mlaA phospholipid-binding lipoprotein MlaA low > 87
Escherichia coli ECRC100 0.71 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.24 OKFHMN_22535 mlaA phospholipid-binding lipoprotein MlaA low > 80
Escherichia coli ECRC102 0.71 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.24 NIAGMN_20310 mlaA phospholipid-binding lipoprotein MlaA — —
Escherichia coli ECRC62 0.71 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.24 BNILDI_13080 mlaA phospholipid-binding lipoprotein MlaA low > 75
Escherichia coli ECRC99 0.71 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.24 KEDOAH_05660 mlaA phospholipid-binding lipoprotein MlaA — —
Escherichia coli ECOR27 0.71 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.24 NOLOHH_14170 mlaA phospholipid-binding lipoprotein MlaA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.24 OHPLBJKB_01360 putative phospholipid-binding lipoprotein MlaA low > 73
Ralstonia solanacearum GMI1000 0.71 RS_RS00555 phosphomethylpyrimidine synthase 0.36 RS_RS14830 ABC transporter low > 80
Enterobacter asburiae PDN3 0.71 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.25 EX28DRAFT_0267 Surface lipoprotein low > 76
Pantoea sp. MT58 0.71 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.26 IAI47_06110 phospholipid-binding lipoprotein MlaA low > 76
Escherichia coli ECOR38 0.71 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.24 HEPCGN_21730 mlaA phospholipid-binding lipoprotein MlaA low > 87
Escherichia coli BL21 0.71 ECD_03871 phosphomethylpyrimidine synthase 0.24 ECD_02272 ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF4198 Thiamin biosynthesis protein ThiC 0.24 GFF1958 Lipoprotein low > 78
Enterobacter sp. TBS_079 0.70 MPMX20_00217 Phosphomethylpyrimidine synthase 0.25 MPMX20_03272 Intermembrane phospholipid transport system lipoprotein MlaA 0.33 44
Dickeya dianthicola 67-19 0.70 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.25 HGI48_RS14575 phospholipid-binding lipoprotein MlaA low > 71
Serratia liquefaciens MT49 0.70 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.24 IAI46_18065 phospholipid-binding lipoprotein MlaA low > 86
Klebsiella michiganensis M5al 0.70 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.25 BWI76_RS20475 phospholipid-binding lipoprotein MlaA low > 92
Dickeya dianthicola ME23 0.70 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.25 DZA65_RS15515 phospholipid-binding lipoprotein MlaA low > 75
Variovorax sp. SCN45 0.67 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.43 GFF5337 Outer-membrane-phospholipid-binding lipoprotein MlaA low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.39 GFF1322 Nucleoside ABC transporter, periplasmic nucleoside-binding protein 0.36 87
Acidovorax sp. GW101-3H11 0.66 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.36 Ac3H11_4715 VacJ family lipoprotein low > 79
Variovorax sp. OAS795 0.66 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.41 ABID97_RS23200 VacJ family lipoprotein low > 91
Azospirillum brasilense Sp245 0.65 AZOBR_RS07940 phosphomethylpyrimidine synthase 0.27 AZOBR_RS09530 VacJ-like lipoprotein low > 97

Not shown: 40 genomes with orthologs for PFLU_RS02430 only; 2 genomes with orthologs for PFLU_RS07785 only