Conservation of cofitness between OKFHMN_09385 and OKFHMN_12240 in Escherichia coli ECRC100

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_09385 fimB integrase 1.0 OKFHMN_12240 hflC protease modulator HflC 0.67 8
Escherichia coli ECRC102 1.00 NIAGMN_07435 fimB integrase 1.00 NIAGMN_10090 hflC protease modulator HflC — —
Escherichia coli ECRC98 1.00 JDDGAC_13020 fimB integrase 1.00 JDDGAC_15880 hflC protease modulator HflC low > 86
Klebsiella michiganensis M5al 0.91 BWI76_RS05825 putative site specific integrase 0.87 BWI76_RS02550 protease modulator HflC low > 92
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2648 Integrase 0.85 EX28DRAFT_3372 HflC protein low > 76
Pectobacterium carotovorum WPP14 0.75 HER17_RS04720 tyrosine-type recombinase/integrase 0.79 HER17_RS02600 protease modulator HflC low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS16520 tyrosine-type recombinase/integrase 0.74 DDA3937_RS18595 protease modulator HflC — —
Rahnella sp. WP5 0.66 EX31_RS20945 tyrosine-type recombinase/integrase 0.79 EX31_RS08805 protease modulator HflC low > 89
Serratia liquefaciens MT49 0.65 IAI46_05415 tyrosine-type recombinase/integrase 0.79 IAI46_01640 protease modulator HflC low > 86
Dickeya dianthicola 67-19 0.63 HGI48_RS14775 tyrosine-type recombinase/integrase 0.74 HGI48_RS18530 protease modulator HflC low > 71
Pseudomonas stutzeri RCH2 0.59 Psest_4016 Integrase 0.30 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs — —
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS02275 integrase arm-type DNA-binding domain-containing protein 0.30 ABZR86_RS08350 protease modulator HflC low > 74
Dechlorosoma suillum PS 0.40 Dsui_0218 Integrase 0.33 Dsui_3134 membrane protease subunit, stomatin/prohibitin — —
Pseudomonas sp. S08-1 0.40 OH686_21775 Phage integrase 0.29 OH686_09455 HflC protein low > 80
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU1527 site-specific recombinase, phage integrase family (TIGR) 0.25 DVU0683 hflC protein, putative (TIGR) low > 55
Dickeya dianthicola ME23 0.39 DZA65_RS04000 tyrosine-type recombinase/integrase 0.74 DZA65_RS19665 protease modulator HflC low > 75
Pseudomonas simiae WCS417 0.38 PS417_10250 integrase 0.28 PS417_02505 membane protease HflC — —
Pseudomonas fluorescens SBW25 0.37 PFLU_RS09280 DUF4102 domain-containing protein 0.30 PFLU_RS02585 protease modulator HflC low > 109
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS09280 DUF4102 domain-containing protein 0.30 PFLU_RS02585 protease modulator HflC low > 109
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_11495 integrase 0.31 AO353_13160 membrane protease HflC low > 101
Shewanella sp. ANA-3 0.36 Shewana3_2953 phage integrase family protein (RefSeq) 0.49 Shewana3_0600 HflC protein (RefSeq) low > 73
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_1748 Integrase 0.15 Ga0059261_1381 Membrane protease subunits, stomatin/prohibitin homologs low > 68
Shewanella oneidensis MR-1 0.35 SO1471 site-specific recombinase, phage integrase family (NCBI ptt file) 0.49 SO0606 hflC hflC protein (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS18370 integrase 0.29 RR42_RS13100 membrane protein — —
Shewanella loihica PV-4 0.33 Shew_1267 phage integrase family protein (RefSeq) 0.47 Shew_0569 HflC protein (RefSeq) low > 60
Rhodanobacter denitrificans MT42 0.32 LRK55_RS10445 tyrosine-type recombinase/integrase 0.30 LRK55_RS00385 protease modulator HflC low > 63
Lysobacter sp. OAE881 0.30 ABIE51_RS08660 site-specific integrase 0.29 ABIE51_RS06555 protease modulator HflC low > 62
Ralstonia solanacearum UW163 0.29 UW163_RS08775 integrase 0.30 UW163_RS12780 protease modulator HflC — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS12430 DUF4102 domain-containing protein 0.30 RPSI07_RS18060 protease modulator HflC low > 81
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3004 Integrase 0.32 Pf1N1B4_1409 HflC protein — —
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS10240 tyrosine-type recombinase/integrase 0.22 QEN71_RS06015 protease modulator HflC low > 153
Rhodopseudomonas palustris CGA009 0.24 TX73_011375 tyrosine-type recombinase/integrase 0.28 TX73_018075 protease modulator HflC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01203 Prophage integrase IntA 1.00 OHPLBJKB_03867 Modulator of FtsH protease HflC low > 73
Rhodospirillum rubrum S1H 0.24 Rru_A0354 Phage integrase (NCBI) 0.27 Rru_A2202 HflC (NCBI) — —
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS32385 integrase 0.20 BPHYT_RS12540 membrane protein — —
Alteromonas macleodii MIT1002 0.16 MIT1002_04073 Putative prophage CPS-53 integrase 0.49 MIT1002_03785 Modulator of FtsH protease HflC low > 70
Azospirillum brasilense Sp245 0.13 AZOBR_RS30360 integrase 0.26 AZOBR_RS06525 membrane protein low > 97
Dinoroseobacter shibae DFL-12 0.09 Dshi_3213 integrase family protein (RefSeq) 0.28 Dshi_2735 HflC protein (RefSeq) low > 64

Not shown: 0 genomes with orthologs for OKFHMN_09385 only; 47 genomes with orthologs for OKFHMN_12240 only