Conservation of cofitness between MIT1002_03473 and MIT1002_00116 in Alteromonas macleodii MIT1002

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Alteromonas macleodii MIT1002 1.0 MIT1002_03473 5-keto-D-gluconate transporter 1.0 MIT1002_00116 Spermidine/putrescine transport system permease protein PotB 0.50 12
Pseudomonas putida KT2440 0.36 PP_3417 D-gluconate transporter 0.19 PP_4882 Iron ABC transporter, permease protein low > 96
Pseudomonas sp. SVBP6 0.36 COO64_RS25580 GntP family permease 0.17 COO64_RS17935 iron ABC transporter permease low > 93
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS28835 gluconate:H+ symporter (gntT) (from data) 0.15 RR42_RS04345 iron ABC transporter permease low > 128
Pseudomonas sp. BP01 0.36 JOY50_RS23615 GntP family permease 0.19 JOY50_RS17300 iron ABC transporter permease — —
Enterobacter sp. TBS_079 0.36 MPMX20_04302 High-affinity gluconate transporter 0.15 MPMX20_01120 hypothetical protein low > 85
Dickeya dianthicola ME23 0.35 DZA65_RS20960 gluconate transporter 0.15 DZA65_RS09030 iron ABC transporter permease low > 75
Enterobacter asburiae PDN3 0.35 EX28DRAFT_4127 gluconate transporter 0.15 EX28DRAFT_2436 ABC-type Fe3+ transport system, permease component low > 76
Klebsiella michiganensis M5al 0.35 BWI76_RS26235 gluconate transporter 0.15 BWI76_RS10475 binding-protein-dependent transport system inner membrane protein low > 92
Dickeya dadantii 3937 0.35 DDA3937_RS19775 gluconate transporter 0.16 DDA3937_RS08595 iron ABC transporter permease low > 74
Dickeya dianthicola 67-19 0.35 HGI48_RS19890 gluconate transporter 0.16 HGI48_RS08735 iron ABC transporter permease low > 71
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS08740 permease 0.11 HSERO_RS16585 iron ABC transporter permease low > 78
Pantoea agglomerans CFBP13505 P0401 0.35 PagCFBP13505_RS03190 gluconate transporter 0.08 PagCFBP13505_RS16385 iron ABC transporter permease low > 74
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0417 gluconate permease GntT 0.15 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0417 gluconate permease GntT 0.15 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas aeruginosa MRSN321 0.35 DY961_RS18000 GntP family permease 0.19 DY961_RS29290 iron ABC transporter permease low > 100
Pseudomonas aeruginosa PA14 0.35 IKLFDK_11385 Gluconate permease 0.19 IKLFDK_00045 iron ABC transporter permease low > 98
Pseudomonas aeruginosa PUPa3 0.35 DQ20_RS59240 GntP family permease 0.19 DQ20_RS57635 iron ABC transporter permease low > 101
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_25205 permease DsdX 0.19 AO353_13180 iron ABC transporter permease low > 101
Rahnella sp. WP5 0.34 EX31_RS16635 gluconate transporter 0.13 EX31_RS17575 iron ABC transporter permease low > 89
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1927 Gluconate permease 0.18 PfGW456L13_146 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas fluorescens SBW25 0.34 PFLU_RS23585 GntP family permease 0.18 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas simiae WCS417 0.34 PS417_21980 permease DsdX 0.18 PS417_02525 iron ABC transporter permease low > 88
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS23585 GntP family permease 0.18 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_556 Gluconate permease 0.19 Pf1N1B4_2233 Ferric iron ABC transporter, permease protein low > 87
Erwinia tracheiphila SCR3 0.34 LU632_RS19170 gntU gluconate transporter 0.13 LU632_RS03340 iron ABC transporter permease low > 73
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_04534 High-affinity gluconate transporter 0.19 GEMAOFIL_00743 hypothetical protein low > 96
Erwinia tracheiphila HP pepo 2.2 0.34 IJEDHG_08030 gntU gluconate transporter 0.13 IJEDHG_05515 Iron ABC transporter permease low > 61
Serratia liquefaciens MT49 0.34 IAI46_23170 gluconate transporter 0.11 IAI46_13020 iron ABC transporter permease low > 87
Klebsiella pneumoniae MKP103 0.34 KDGMDA_07030 gluconate transporter 0.07 KDGMDA_22890 ABC transporter permease low > 95
Pseudomonas orientalis W4I3 0.34 QF045_RS24085 GntP family permease 0.19 QF045_RS05585 iron ABC transporter permease low > 93
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_05055 permease DsdX 0.17 AO356_13030 iron ABC transporter permease low > 104
Pseudomonas sp. DMC3 0.34 GFF4936 High-affinity gluconate transporter 0.19 GFF3227 hypothetical protein low > 89
Pseudomonas sp. RS175 0.34 PFR28_00595 High-affinity gluconate transporter 0.18 PFR28_04317 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_2863 Gluconate permease 0.18 Pf6N2E2_4484 Ferric iron ABC transporter, permease protein low > 103
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS16725 gluconate:H+ symporter (gntT) (from data) 0.14 BPHYT_RS23965 iron ABC transporter permease 0.14 108
Acidovorax sp. GW101-3H11 0.31 Ac3H11_3740 Gluconate permease 0.12 Ac3H11_3971 Ferric iron ABC transporter, permease protein low > 79
Variovorax sp. SCN45 0.28 GFF1885 Gluconate transporter family protein 0.12 GFF6761 Ferric iron ABC transporter, permease protein low > 127
Pectobacterium carotovorum WPP14 0.28 HER17_RS01460 GntP family permease 0.14 HER17_RS06560 iron ABC transporter permease low > 75
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_01470 permease 0.14 CSW01_03210 iron ABC transporter permease low > 62
Rhodospirillum rubrum S1H 0.26 Rru_A3140 Gluconate transporter (NCBI) 0.13 Rru_A0768 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Fusobacterium nucleatum SB010 0.26 HUW76_01945 GntP family permease 0.11 HUW76_03170 iron ABC transporter permease low > 35
Shewanella loihica PV-4 0.21 Shew_2533 gluconate transporter (RefSeq) 0.12 Shew_0862 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 60
Pseudomonas segetis P6 0.20 ACVTMO_RS17285 GntP family permease 0.21 ACVTMO_RS06750 ABC transporter permease low > 75
Shewanella oneidensis MR-1 0.18 SO1771 permease, GntP family (NCBI ptt file) 0.17 SO0743 iron(III) ABC transporter, permease protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.17 Shewana3_2684 gluconate transporter (RefSeq) 0.17 Shewana3_3516 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 73

Not shown: 31 genomes with orthologs for MIT1002_03473 only; 24 genomes with orthologs for MIT1002_00116 only