Conservation of cofitness between MCAODC_07430 and MCAODC_11020 in Escherichia coli ECRC101

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_07430 glgA glycogen synthase GlgA 1.0 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS 0.64 4
Escherichia coli ECOR38 1.00 HEPCGN_15715 glgA glycogen synthase GlgA 1.00 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia coli ECRC62 1.00 BNILDI_02825 glgA glycogen synthase GlgA 1.00 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00272 Glycogen synthase 1.00 OHPLBJKB_00992 RNA polymerase sigma factor RpoS low > 73
Escherichia fergusonii Becca 1.00 EFB2_00390 Glycogen synthase 1.00 EFB2_01169 RNA polymerase sigma factor RpoS low > 86
Escherichia coli ECRC102 1.00 NIAGMN_14670 glgA glycogen synthase GlgA 1.00 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS
Escherichia coli ECRC98 1.00 JDDGAC_20530 glgA glycogen synthase GlgA 1.00 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS low > 86
Escherichia coli ECOR27 1.00 NOLOHH_08690 glgA glycogen synthase GlgA 1.00 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli ECRC100 1.00 OKFHMN_16900 glgA glycogen synthase GlgA 0.92 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS low > 80
Escherichia coli BW25113 1.00 b3429 glgA glycogen synthase (NCBI) 1.00 b2741 rpoS RNA polymerase sigma factor (NCBI) low > 76
Escherichia coli BL21 1.00 ECD_03281 glycogen synthase 1.00 ECD_02591 RNA polymerase, sigma S (sigma 38) factor low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.99 GFF4788 RNA polymerase sigma factor RpoS low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type 0.99 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_04311 Glycogen synthase 0.99 MPMX20_03627 RNA polymerase sigma factor RpoS low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS26200 starch synthase 0.99 BWI76_RS22645 RNA polymerase sigma factor RpoS low > 92
Pantoea sp. MT58 0.83 IAI47_01695 glycogen synthase GlgA 0.95 IAI47_04235 RNA polymerase sigma factor RpoS 0.49 8
Dickeya dadantii 3937 0.81 DDA3937_RS19730 glycogen synthase GlgA 0.93 DDA3937_RS16875 RNA polymerase sigma factor RpoS
Dickeya dianthicola 67-19 0.80 HGI48_RS19840 glycogen synthase GlgA 0.93 HGI48_RS16945 RNA polymerase sigma factor RpoS low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS20915 glycogen synthase GlgA 0.94 DZA65_RS18020 RNA polymerase sigma factor RpoS low > 75
Pectobacterium carotovorum WPP14 0.79 HER17_RS01500 glycogen synthase GlgA 0.92 HER17_RS04350 RNA polymerase sigma factor RpoS low > 75
Serratia liquefaciens MT49 0.74 IAI46_23925 glycogen synthase GlgA 0.95 IAI46_03790 RNA polymerase sigma factor RpoS low > 86
Rahnella sp. WP5 0.71 EX31_RS05010 glycogen synthase GlgA 0.92 EX31_RS07825 RNA polymerase sigma factor RpoS low > 89
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04861 starch synthase 0.38 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS23430 glycogen synthase GlgA 0.38 QEN71_RS22240 RNA polymerase sigma factor RpoS 0.51 5
Variovorax sp. SCN45 0.48 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.34 GFF2842 RNA polymerase sigma factor RpoS low > 127
Variovorax sp. OAS795 0.48 ABID97_RS04535 glycogen synthase GlgA 0.32 ABID97_RS10730 sigma-70 family RNA polymerase sigma factor low > 91
Marinobacter adhaerens HP15 0.42 HP15_1713 glycogen/starch synthase, ADP-glucose type 0.64 HP15_1283 RNA polymerase, sigma 70 subunit, RpoD family low > 73
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_2992 Starch (bacterial glycogen) synthase 0.64 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_2992 Starch (bacterial glycogen) synthase 0.64 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS low > 86
Pseudomonas sp. S08-1 0.37 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase 0.65 OH686_18185 RNA polymerase sigma factor RpoS low > 80
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_23775 glycogen synthase 0.64 AO353_16615 RNA polymerase sigma factor RpoS 0.35 73
Pseudomonas sp. RS175 0.36 PFR28_02145 Glycogen synthase 0.64 PFR28_00427 RNA polymerase sigma factor RpoS low > 88
Pseudomonas fluorescens SBW25 0.36 PFLU_RS16410 glycogen synthase GlgA 0.64 PFLU_RS06430 RNA polymerase sigma factor RpoS low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS16410 glycogen synthase GlgA 0.64 PFLU_RS06430 RNA polymerase sigma factor RpoS low > 109
Pseudomonas simiae WCS417 0.36 PS417_14480 glycogen synthase 0.64 PS417_06365 RNA polymerase sigma factor 0.24 27
Pseudomonas stutzeri RCH2 0.36 Psest_2172 glycogen/starch synthases, ADP-glucose type 0.63 Psest_2806 RNA polymerase sigma factor RpoS low > 67
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.64 PfGW456L13_4674 RNA polymerase sigma factor RpoS 0.32 26
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_26025 glycogen synthase 0.64 AO356_05885 RNA polymerase sigma factor RpoS 0.52 12
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.64 Pf6N2E2_3037 RNA polymerase sigma factor RpoS 0.37 9
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_4687 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.64 Pf1N1B4_3115 RNA polymerase sigma factor RpoS 0.29 31
Pseudomonas putida KT2440 0.35 PP_4050 glycogen synthase 0.64 PP_1623 RNA polymerase, sigma S (sigma 38) factor low > 96
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS12515 glycogen synthase 0.45 HSERO_RS14830 RNA polymerase sigma factor RpoS low > 78
Alteromonas macleodii MIT1002 0.30 MIT1002_00235 Glycogen synthase 0.71 MIT1002_00625 RNA polymerase sigma factor RpoS low > 70
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_2518 glgA glycogen synthase 0.35 Synpcc7942_1557 rpoD6 principal RNA polymerase sigma factor SigA low > 38
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_08685 glycogen synthase 0.71 CSW01_02835 RNA polymerase sigma factor RpoS low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS18980 glycogen synthase 0.31 ABZR88_RS15895 RNA polymerase sigma factor RpoD/SigA
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS04140 glycogen synthase 0.31 CA265_RS04285 RNA polymerase sigma factor RpoD
Shewanella amazonensis SB2B 0.16 Sama_2449 starch synthase (RefSeq) 0.70 Sama_1044 RNA polymerase sigma-38 factor (RefSeq) low > 62
Shewanella oneidensis MR-1 0.15 SO1499 glgA glycogen synthase (NCBI ptt file) 0.69 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.15 Shewana3_2930 starch synthase catalytic subunit (RefSeq) 0.69 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) low > 73
Shewanella loihica PV-4 0.13 Shew_1172 starch synthase (RefSeq) 0.72 Shew_1213 RpoD family RNA polymerase sigma factor (RefSeq) low > 60

Not shown: 23 genomes with orthologs for MCAODC_07430 only; 4 genomes with orthologs for MCAODC_11020 only