Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECRC101 | 1.0 | MCAODC_07430 | glgA | glycogen synthase GlgA | 1.0 | MCAODC_11020 | rpoS | RNA polymerase sigma factor RpoS | 0.64 | 4 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_15715 | glgA | glycogen synthase GlgA | 1.00 | HEPCGN_19675 | rpoS | RNA polymerase sigma factor RpoS | low | > 87 |
Escherichia coli ECRC62 | 1.00 | BNILDI_02825 | glgA | glycogen synthase GlgA | 1.00 | BNILDI_10860 | rpoS | RNA polymerase sigma factor RpoS | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00272 | | Glycogen synthase | 1.00 | OHPLBJKB_00992 | | RNA polymerase sigma factor RpoS | low | > 73 |
Escherichia fergusonii Becca | 1.00 | EFB2_00390 | | Glycogen synthase | 1.00 | EFB2_01169 | | RNA polymerase sigma factor RpoS | low | > 86 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_14670 | glgA | glycogen synthase GlgA | 1.00 | NIAGMN_18265 | rpoS | RNA polymerase sigma factor RpoS | — | — |
Escherichia coli ECRC98 | 1.00 | JDDGAC_20530 | glgA | glycogen synthase GlgA | 1.00 | JDDGAC_24160 | rpoS | RNA polymerase sigma factor RpoS | low | > 86 |
Escherichia coli ECOR27 | 1.00 | NOLOHH_08690 | glgA | glycogen synthase GlgA | 1.00 | NOLOHH_12310 | rpoS | RNA polymerase sigma factor RpoS | low | > 75 |
Escherichia coli ECRC100 | 1.00 | OKFHMN_16900 | glgA | glycogen synthase GlgA | 0.92 | OKFHMN_20495 | rpoS | RNA polymerase sigma factor RpoS | low | > 80 |
Escherichia coli BW25113 | 1.00 | b3429 | glgA | glycogen synthase (NCBI) | 1.00 | b2741 | rpoS | RNA polymerase sigma factor (NCBI) | low | > 76 |
Escherichia coli BL21 | 1.00 | ECD_03281 | | glycogen synthase | 1.00 | ECD_02591 | | RNA polymerase, sigma S (sigma 38) factor | low | > 61 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.95 | GFF578 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | 0.99 | GFF4788 | | RNA polymerase sigma factor RpoS | low | > 78 |
Enterobacter asburiae PDN3 | 0.93 | EX28DRAFT_4118 | | glycogen/starch synthase, ADP-glucose type | 0.99 | EX28DRAFT_2837 | | RNA polymerase, sigma 38 subunit, RpoS | low | > 76 |
Enterobacter sp. TBS_079 | 0.93 | MPMX20_04311 | | Glycogen synthase | 0.99 | MPMX20_03627 | | RNA polymerase sigma factor RpoS | low | > 85 |
Klebsiella michiganensis M5al | 0.92 | BWI76_RS26200 | | starch synthase | 0.99 | BWI76_RS22645 | | RNA polymerase sigma factor RpoS | low | > 92 |
Pantoea sp. MT58 | 0.83 | IAI47_01695 | | glycogen synthase GlgA | 0.95 | IAI47_04235 | | RNA polymerase sigma factor RpoS | 0.49 | 8 |
Dickeya dadantii 3937 | 0.81 | DDA3937_RS19730 | | glycogen synthase GlgA | 0.93 | DDA3937_RS16875 | | RNA polymerase sigma factor RpoS | — | — |
Dickeya dianthicola 67-19 | 0.80 | HGI48_RS19840 | | glycogen synthase GlgA | 0.93 | HGI48_RS16945 | | RNA polymerase sigma factor RpoS | low | > 71 |
Dickeya dianthicola ME23 | 0.80 | DZA65_RS20915 | | glycogen synthase GlgA | 0.94 | DZA65_RS18020 | | RNA polymerase sigma factor RpoS | low | > 75 |
Pectobacterium carotovorum WPP14 | 0.79 | HER17_RS01500 | | glycogen synthase GlgA | 0.92 | HER17_RS04350 | | RNA polymerase sigma factor RpoS | low | > 75 |
Serratia liquefaciens MT49 | 0.74 | IAI46_23925 | | glycogen synthase GlgA | 0.95 | IAI46_03790 | | RNA polymerase sigma factor RpoS | low | > 86 |
Rahnella sp. WP5 | 0.71 | EX31_RS05010 | | glycogen synthase GlgA | 0.92 | EX31_RS07825 | | RNA polymerase sigma factor RpoS | low | > 89 |
Paraburkholderia bryophila 376MFSha3.1 | 0.50 | H281DRAFT_04861 | | starch synthase | 0.38 | H281DRAFT_00844 | | RNA polymerase, sigma 38 subunit, RpoS | — | — |
Paraburkholderia sabiae LMG 24235 | 0.50 | QEN71_RS23430 | | glycogen synthase GlgA | 0.38 | QEN71_RS22240 | | RNA polymerase sigma factor RpoS | 0.51 | 5 |
Variovorax sp. SCN45 | 0.48 | GFF7302 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | 0.34 | GFF2842 | | RNA polymerase sigma factor RpoS | low | > 127 |
Variovorax sp. OAS795 | 0.48 | ABID97_RS04535 | | glycogen synthase GlgA | 0.32 | ABID97_RS10730 | | sigma-70 family RNA polymerase sigma factor | low | > 91 |
Marinobacter adhaerens HP15 | 0.42 | HP15_1713 | | glycogen/starch synthase, ADP-glucose type | 0.64 | HP15_1283 | | RNA polymerase, sigma 70 subunit, RpoD family | low | > 73 |
Pseudomonas syringae pv. syringae B728a | 0.38 | Psyr_2992 | | Starch (bacterial glycogen) synthase | 0.64 | Psyr_1374 | | RNA polymerase, sigma 38 subunit, RpoS | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.38 | Psyr_2992 | | Starch (bacterial glycogen) synthase | 0.64 | Psyr_1374 | | RNA polymerase, sigma 38 subunit, RpoS | low | > 86 |
Pseudomonas sp. S08-1 | 0.37 | OH686_01280 | | Glycogen synthase, ADP-glucose transglucosylase | 0.65 | OH686_18185 | | RNA polymerase sigma factor RpoS | low | > 80 |
Pseudomonas fluorescens FW300-N2E3 | 0.36 | AO353_23775 | | glycogen synthase | 0.64 | AO353_16615 | | RNA polymerase sigma factor RpoS | 0.35 | 73 |
Pseudomonas sp. RS175 | 0.36 | PFR28_02145 | | Glycogen synthase | 0.64 | PFR28_00427 | | RNA polymerase sigma factor RpoS | low | > 88 |
Pseudomonas fluorescens SBW25 | 0.36 | PFLU_RS16410 | | glycogen synthase GlgA | 0.64 | PFLU_RS06430 | | RNA polymerase sigma factor RpoS | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.36 | PFLU_RS16410 | | glycogen synthase GlgA | 0.64 | PFLU_RS06430 | | RNA polymerase sigma factor RpoS | low | > 109 |
Pseudomonas simiae WCS417 | 0.36 | PS417_14480 | | glycogen synthase | 0.64 | PS417_06365 | | RNA polymerase sigma factor | 0.24 | 27 |
Pseudomonas stutzeri RCH2 | 0.36 | Psest_2172 | | glycogen/starch synthases, ADP-glucose type | 0.63 | Psest_2806 | | RNA polymerase sigma factor RpoS | low | > 67 |
Pseudomonas fluorescens GW456-L13 | 0.36 | PfGW456L13_3245 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | 0.64 | PfGW456L13_4674 | | RNA polymerase sigma factor RpoS | 0.32 | 26 |
Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_26025 | | glycogen synthase | 0.64 | AO356_05885 | | RNA polymerase sigma factor RpoS | 0.52 | 12 |
Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_1078 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | 0.64 | Pf6N2E2_3037 | | RNA polymerase sigma factor RpoS | 0.37 | 9 |
Pseudomonas fluorescens FW300-N1B4 | 0.35 | Pf1N1B4_4687 | | Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) | 0.64 | Pf1N1B4_3115 | | RNA polymerase sigma factor RpoS | 0.29 | 31 |
Pseudomonas putida KT2440 | 0.35 | PP_4050 | | glycogen synthase | 0.64 | PP_1623 | | RNA polymerase, sigma S (sigma 38) factor | low | > 96 |
Herbaspirillum seropedicae SmR1 | 0.33 | HSERO_RS12515 | | glycogen synthase | 0.45 | HSERO_RS14830 | | RNA polymerase sigma factor RpoS | low | > 78 |
Alteromonas macleodii MIT1002 | 0.30 | MIT1002_00235 | | Glycogen synthase | 0.71 | MIT1002_00625 | | RNA polymerase sigma factor RpoS | low | > 70 |
Synechococcus elongatus PCC 7942 | 0.28 | Synpcc7942_2518 | glgA | glycogen synthase | 0.35 | Synpcc7942_1557 | rpoD6 | principal RNA polymerase sigma factor SigA | low | > 38 |
Vibrio cholerae E7946 ATCC 55056 | 0.27 | CSW01_08685 | | glycogen synthase | 0.71 | CSW01_02835 | | RNA polymerase sigma factor RpoS | low | > 62 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.26 | ABZR88_RS18980 | | glycogen synthase | 0.31 | ABZR88_RS15895 | | RNA polymerase sigma factor RpoD/SigA | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.25 | CA265_RS04140 | | glycogen synthase | 0.31 | CA265_RS04285 | | RNA polymerase sigma factor RpoD | — | — |
Shewanella amazonensis SB2B | 0.16 | Sama_2449 | | starch synthase (RefSeq) | 0.70 | Sama_1044 | | RNA polymerase sigma-38 factor (RefSeq) | low | > 62 |
Shewanella oneidensis MR-1 | 0.15 | SO1499 | glgA | glycogen synthase (NCBI ptt file) | 0.69 | SO3432 | rpoS | RNA polymerase sigma-38 factor (NCBI ptt file) | low | > 76 |
Shewanella sp. ANA-3 | 0.15 | Shewana3_2930 | | starch synthase catalytic subunit (RefSeq) | 0.69 | Shewana3_1124 | | RNA polymerase, sigma 38 subunit, RpoS (RefSeq) | low | > 73 |
Shewanella loihica PV-4 | 0.13 | Shew_1172 | | starch synthase (RefSeq) | 0.72 | Shew_1213 | | RpoD family RNA polymerase sigma factor (RefSeq) | low | > 60 |
Not shown: 23 genomes with orthologs for MCAODC_07430 only; 4 genomes with orthologs for MCAODC_11020 only